RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 SMIM2Q9BVW6 85 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 A0A087WTM6 91 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 TRAV8-3A0A0A6YYJ7 113 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 A0A1B0GV90 55 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 BAGE3Q86Y29 109 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
SYCP1-210ENST00000618516 GNB1LQ9BYB4 327 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 CNFNQ9BYD5 112 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 A0A1B0GXF2 115 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 C2orf66Q6UXQ4 117 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 CHCHD7Q9BUK0 85 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 COL5A1-AS1Q5SY13 56 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 ZNF625Q96I27 306 aaPredicted RBP3.06□□□□□ -1.92
SYCP1-210ENST00000618516 SNHG12Q9BXW3 62 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 IBA57-AS1B1ANH7 110 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 UPK3BQ9BT76 320 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 HSPG2P98160 4391 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 POLR2KP53803 58 aaKnown RBP3.05□□□□□ -1.92
SYCP1-210ENST00000618516 COX6A2Q02221 97 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 SCGB3A1Q96QR1 104 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 FAM30AQ9NZY2 134 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 PPBPP02775 128 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 PRSS1P07477 247 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 KRTAP10-1P60331 282 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 C2orf82Q6UX34 121 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 TRBV27A0A0K0K1C4 114 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 ZNF561-AS1K7EIQ3 104 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 CIDEAO60543 219 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 GAGE2BQ13066 116 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 GAGE2EQ4V326 116 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 PIK3CD-AS1Q5SR53 167 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 Q6ZN92 141 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 Q6ZRN7 208 aaPredicted RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 TM2D2Q9BX73 214 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 VCX2Q9H322 139 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 AP5S1Q9NUS5 200 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 UQCR10Q9UDW1 63 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 GAGE2DQ9UEU5 116 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 HERC1Q15751 4861 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 VPS13BQ7Z7G8 4022 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 LINC00959A0A1B0GUT2 108 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 LRCOL1A6NCL2 159 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 HSBP1O75506 76 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 LAGE3Q14657 143 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 SS18Q15532 418 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 C9orf116Q5BN46 136 aaPredicted RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 LINC00173Q6ZV60 143 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 ATP5L2Q7Z4Y8 100 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 ALKBH7Q9BT30 221 aaPredicted RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 CYSLTR1Q9Y271 337 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 RPL18AQ02543 176 aaKnown RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 MIAQ16674 131 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 NFE4Q86UQ8 179 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 PTH2Q96A98 100 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 GEMIN7Q9H840 131 aaKnown RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 UBE2D4Q9Y2X8 147 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 HERC2O95714 4834 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 CDPF1Q6NVV7 123 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 LINC00336Q6ZUF6 198 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 Q8N814 137 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 C18orf32Q8TCD1 76 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 RMI2Q96E14 147 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 A0A1B0GW15 77 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 SPINK8P0C7L1 97 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 GCSHP23434 173 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 TMEM170BQ5T4T1 132 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 VAMP8Q9BV40 100 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 LRP1Q07954 4544 aaKnown RBP3.03□□□□□ -1.93
SYCP1-210ENST00000618516 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 PANO1I0J062 215 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 COX7A2LO14548 114 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 NUPR1O60356 82 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 SERF1AO75920 110 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 PPP1R17O96001 155 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 MAJINQ3KP22 176 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 CAMK2N2Q96S95 79 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 KRTAP4-5Q9BYR2 181 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 IGLV4-3A0A075B6K6 122 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 Q8N8P6 123 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 TMEM141Q96I45 108 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 C20orf78Q9BR46 151 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 XAGE1AQ9HD64 81 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 TRBV6-5A0A0K0K1A5 114 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 SLPIP03973 132 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 PFN2P35080 140 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 SPAG11BQ08648 103 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 TMEM97Q5BJF2 176 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 PRO1933Q9H354 126 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 NXT2Q9NPJ8 142 aaKnown RBP3.02□□□□□ -1.93
SYCP1-210ENST00000618516 CDKN2A-AS1Q9UH64 79 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 IGLC3P0DOY3 106 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 ZNF25P17030 456 aaPredicted RBP3.01□□□□□ -1.93
SYCP1-210ENST00000618516 LINC00310P59036 64 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 UBE2V1Q13404 147 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 ORMDL2Q53FV1 153 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 C6orf226Q5I0X4 101 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 C10orf25Q5T742 122 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 UNQ6190/PRO20217Q6UXQ8 127 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms