RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 SMIM2Q9BVW6 85 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 A0A087WTM6 91 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 TRAV8-3A0A0A6YYJ7 113 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 A0A1B0GV90 55 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 BAGE3Q86Y29 109 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
SYCP1-210ENST00000618516 GNB1LQ9BYB4 327 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 CNFNQ9BYD5 112 aa3.07□□□□□ -1.92
SYCP1-210ENST00000618516 A0A1B0GXF2 115 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 C2orf66Q6UXQ4 117 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 CHCHD7Q9BUK0 85 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 COL5A1-AS1Q5SY13 56 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 ZNF625Q96I27 306 aaPredicted RBP3.06□□□□□ -1.92
SYCP1-210ENST00000618516 SNHG12Q9BXW3 62 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 IBA57-AS1B1ANH7 110 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 UPK3BQ9BT76 320 aa3.06□□□□□ -1.92
SYCP1-210ENST00000618516 HSPG2P98160 4391 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 POLR2KP53803 58 aaKnown RBP3.05□□□□□ -1.92
SYCP1-210ENST00000618516 COX6A2Q02221 97 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 SCGB3A1Q96QR1 104 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 FAM30AQ9NZY2 134 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 PPBPP02775 128 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 PRSS1P07477 247 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 KRTAP10-1P60331 282 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 C2orf82Q6UX34 121 aa3.05□□□□□ -1.92
SYCP1-210ENST00000618516 TRBV27A0A0K0K1C4 114 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 ZNF561-AS1K7EIQ3 104 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 CIDEAO60543 219 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 GAGE2BQ13066 116 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 GAGE2EQ4V326 116 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 PIK3CD-AS1Q5SR53 167 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 Q6ZN92 141 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 Q6ZRN7 208 aaPredicted RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 TM2D2Q9BX73 214 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 VCX2Q9H322 139 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 AP5S1Q9NUS5 200 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 UQCR10Q9UDW1 63 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 GAGE2DQ9UEU5 116 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 HERC1Q15751 4861 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 VPS13BQ7Z7G8 4022 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 LINC00959A0A1B0GUT2 108 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 LRCOL1A6NCL2 159 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 HSBP1O75506 76 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 LAGE3Q14657 143 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 SS18Q15532 418 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 C9orf116Q5BN46 136 aaPredicted RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 LINC00173Q6ZV60 143 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 ATP5L2Q7Z4Y8 100 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 ALKBH7Q9BT30 221 aaPredicted RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 CYSLTR1Q9Y271 337 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 RPL18AQ02543 176 aaKnown RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 MIAQ16674 131 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 NFE4Q86UQ8 179 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 PTH2Q96A98 100 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 GEMIN7Q9H840 131 aaKnown RBP3.04□□□□□ -1.92
SYCP1-210ENST00000618516 UBE2D4Q9Y2X8 147 aa3.04□□□□□ -1.92
SYCP1-210ENST00000618516 HERC2O95714 4834 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 CDPF1Q6NVV7 123 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 LINC00336Q6ZUF6 198 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 Q8N814 137 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 C18orf32Q8TCD1 76 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 RMI2Q96E14 147 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 CDC42SE2Q9NRR3 84 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 A0A1B0GW15 77 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 SPINK8P0C7L1 97 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 GCSHP23434 173 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 TMEM170BQ5T4T1 132 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 VAMP8Q9BV40 100 aa3.03□□□□□ -1.92
SYCP1-210ENST00000618516 LRP1Q07954 4544 aaKnown RBP3.03□□□□□ -1.93
SYCP1-210ENST00000618516 IGLV4-69A0A075B6H9 119 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 PANO1I0J062 215 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 COX7A2LO14548 114 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 NUPR1O60356 82 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 SERF1AO75920 110 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 PPP1R17O96001 155 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 MAJINQ3KP22 176 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 CAMK2N2Q96S95 79 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 KRTAP4-5Q9BYR2 181 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 IGLV4-3A0A075B6K6 122 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 Q8N8P6 123 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 TMEM141Q96I45 108 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 C20orf78Q9BR46 151 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 XAGE1AQ9HD64 81 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 TRBV6-5A0A0K0K1A5 114 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 SLPIP03973 132 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 PFN2P35080 140 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 SPAG11BQ08648 103 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 TMEM97Q5BJF2 176 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 PRO1933Q9H354 126 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 NXT2Q9NPJ8 142 aaKnown RBP3.02□□□□□ -1.93
SYCP1-210ENST00000618516 CDKN2A-AS1Q9UH64 79 aa3.02□□□□□ -1.93
SYCP1-210ENST00000618516 IGLC3P0DOY3 106 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 ZNF25P17030 456 aaPredicted RBP3.01□□□□□ -1.93
SYCP1-210ENST00000618516 LINC00310P59036 64 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 UBE2V1Q13404 147 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 ORMDL2Q53FV1 153 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 C6orf226Q5I0X4 101 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 C10orf25Q5T742 122 aa3.01□□□□□ -1.93
SYCP1-210ENST00000618516 UNQ6190/PRO20217Q6UXQ8 127 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms