RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 UBE2WQ96B02 151 aa8.41□□□□□ -1.06
C11orf54-215ENST00000617482 DAZ3Q9NR90 486 aaKnown RBP8.41□□□□□ -1.06
C11orf54-215ENST00000617482 FLNAP21333 2647 aaKnown RBP8.4□□□□□ -1.06
C11orf54-215ENST00000617482 F5H768 121 aa8.4□□□□□ -1.06
C11orf54-215ENST00000617482 CDC42SE2Q9NRR3 84 aa8.4□□□□□ -1.06
C11orf54-215ENST00000617482 TRAV4A0A0B4J268 109 aa8.4□□□□□ -1.07
C11orf54-215ENST00000617482 TRBV10-1A0A0K0K1A3 114 aa8.4□□□□□ -1.07
C11orf54-215ENST00000617482 PLA2G2AP14555 144 aa8.4□□□□□ -1.07
C11orf54-215ENST00000617482 PRIMA1Q86XR5 153 aa8.4□□□□□ -1.07
C11orf54-215ENST00000617482 TMEM86BQ8N661 226 aa8.4□□□□□ -1.07
C11orf54-215ENST00000617482 LOC100131303A0A0U1RQF7 123 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 LST1O00453 97 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 GAGE7O76087 117 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 GIG44P09565 113 aaPredicted RBP8.39□□□□□ -1.07
C11orf54-215ENST00000617482 GAGE12FP0CL80 117 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 GAGE12GP0CL81 117 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 GAGE12IP0CL82 117 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 RPL35AP18077 110 aaKnown RBP8.39□□□□□ -1.07
C11orf54-215ENST00000617482 MEIG1Q5JSS6 88 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 TRGV2A0A075B6R0 118 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 CRLF1O75462 422 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 SOSTDC1Q6X4U4 206 aa8.39□□□□□ -1.07
C11orf54-215ENST00000617482 UBE2L6O14933 153 aa8.38□□□□□ -1.07
C11orf54-215ENST00000617482 TEX29Q8N6K0 151 aa8.38□□□□□ -1.07
C11orf54-215ENST00000617482 LINC01600Q96MT4 127 aa8.38□□□□□ -1.07
C11orf54-215ENST00000617482 SETXQ7Z333 2677 aaKnown RBP8.37□□□□□ -1.07
C11orf54-215ENST00000617482 ACANP16112 2415 aa8.37□□□□□ -1.07
C11orf54-215ENST00000617482 IGKV3OR2-268A0A0C4DH90 116 aa8.37□□□□□ -1.07
C11orf54-215ENST00000617482 SNCGO76070 127 aa8.37□□□□□ -1.07
C11orf54-215ENST00000617482 H3BT86 120 aa8.37□□□□□ -1.07
C11orf54-215ENST00000617482 TMEM243Q9BU79 118 aa8.37□□□□□ -1.07
C11orf54-215ENST00000617482 PLAC8L1A1L4L8 177 aa8.36□□□□□ -1.07
C11orf54-215ENST00000617482 FAM19A3Q7Z5A8 133 aa8.36□□□□□ -1.07
C11orf54-215ENST00000617482 LINC01006Q8NI28 216 aa8.35□□□□□ -1.07
C11orf54-215ENST00000617482 ANAPC13Q9BS18 74 aa8.35□□□□□ -1.07
C11orf54-215ENST00000617482 C1orf43Q9BWL3 253 aa8.35□□□□□ -1.07
C11orf54-215ENST00000617482 GAGE2BQ13066 116 aa8.34□□□□□ -1.07
C11orf54-215ENST00000617482 GAGE2EQ4V326 116 aa8.34□□□□□ -1.07
C11orf54-215ENST00000617482 KIR2DL5BQ8NHK3 375 aa8.34□□□□□ -1.07
C11orf54-215ENST00000617482 GAGE2DQ9UEU5 116 aa8.34□□□□□ -1.07
C11orf54-215ENST00000617482 TRGV4A0A0C4DH28 118 aa8.34□□□□□ -1.07
C11orf54-215ENST00000617482 C15orf53Q8NAA6 179 aa8.34□□□□□ -1.07
C11orf54-215ENST00000617482 C16orf74Q96GX8 76 aa8.34□□□□□ -1.07
C11orf54-215ENST00000617482 TOMM7Q9P0U1 55 aa8.33□□□□□ -1.08
C11orf54-215ENST00000617482 MTORP42345 2549 aa8.33□□□□□ -1.08
C11orf54-215ENST00000617482 COX7A2LO14548 114 aa8.32□□□□□ -1.08
C11orf54-215ENST00000617482 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
C11orf54-215ENST00000617482 COPS9Q8WXC6 57 aa8.32□□□□□ -1.08
C11orf54-215ENST00000617482 C19orf73Q9NVV2 129 aa8.32□□□□□ -1.08
C11orf54-215ENST00000617482 IGLV4-60A0A075B6I1 120 aa8.32□□□□□ -1.08
C11orf54-215ENST00000617482 PDZD2O15018 2839 aa8.32□□□□□ -1.08
C11orf54-215ENST00000617482 TRBV6-4A0A1B0GX49 114 aa8.31□□□□□ -1.08
C11orf54-215ENST00000617482 CSNK1G2-AS1Q8NCQ2 148 aa8.31□□□□□ -1.08
C11orf54-215ENST00000617482 IGLV1-51P01701 117 aa8.31□□□□□ -1.08
C11orf54-215ENST00000617482 CMC4P56277 68 aaPredicted RBP8.3□□□□□ -1.08
C11orf54-215ENST00000617482 COX7B2Q8TF08 81 aa8.3□□□□□ -1.08
C11orf54-215ENST00000617482 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
C11orf54-215ENST00000617482 ITPR2Q14571 2701 aa8.3□□□□□ -1.08
C11orf54-215ENST00000617482 MIR7-3HGQ8N6C7 128 aa8.3□□□□□ -1.08
C11orf54-215ENST00000617482 OVOL2Q9BRP0 275 aa8.3□□□□□ -1.08
C11orf54-215ENST00000617482 TRBV6-8A0A0A6YYG3 113 aa8.29□□□□□ -1.08
C11orf54-215ENST00000617482 NHLRC4P0CG21 123 aaPredicted RBP8.29□□□□□ -1.08
C11orf54-215ENST00000617482 NDUFV3P56181 108 aaKnown RBP8.29□□□□□ -1.08
C11orf54-215ENST00000617482 FHL2Q14192 279 aa8.29□□□□□ -1.08
C11orf54-215ENST00000617482 DEFB121Q5J5C9 76 aa8.29□□□□□ -1.08
C11orf54-215ENST00000617482 FAM218AQ96MZ4 157 aa8.29□□□□□ -1.08
C11orf54-215ENST00000617482 DEFB130BP0DP73 79 aa8.29□□□□□ -1.08
C11orf54-215ENST00000617482 DEFB130AP0DP74 79 aa8.29□□□□□ -1.08
C11orf54-215ENST00000617482 TMEM126AQ9H061 195 aa8.29□□□□□ -1.08
C11orf54-215ENST00000617482 LINC00158P58513 81 aa8.28□□□□□ -1.08
C11orf54-215ENST00000617482 C5orf38Q86SI9 138 aa8.28□□□□□ -1.08
C11orf54-215ENST00000617482 ZNF561-AS1K7EIQ3 104 aa8.28□□□□□ -1.08
C11orf54-215ENST00000617482 RNASE1P07998 156 aaKnown RBP8.27□□□□□ -1.09
C11orf54-215ENST00000617482 BAALC-AS2P0C853 105 aa8.27□□□□□ -1.09
C11orf54-215ENST00000617482 KRTAP1-1Q07627 177 aa8.27□□□□□ -1.09
C11orf54-215ENST00000617482 C16orf95Q9H693 158 aa8.27□□□□□ -1.09
C11orf54-215ENST00000617482 FN1P02751 2386 aaKnown RBP8.27□□□□□ -1.09
C11orf54-215ENST00000617482 IGHV3OR16-9A0A0B4J2B5 98 aa8.27□□□□□ -1.09
C11orf54-215ENST00000617482 LINC00337Q8N6G1 96 aa8.27□□□□□ -1.09
C11orf54-215ENST00000617482 Q9HAA7 133 aa8.27□□□□□ -1.09
C11orf54-215ENST00000617482 SND1-IT1Q9HBX3 110 aa8.27□□□□□ -1.09
C11orf54-215ENST00000617482 IGKV2-28A0A075B6P5 120 aa8.26□□□□□ -1.09
C11orf54-215ENST00000617482 FAM240AA0A1B0GVK7 77 aa8.26□□□□□ -1.09
C11orf54-215ENST00000617482 IGKV2D-28P01615 120 aa8.26□□□□□ -1.09
C11orf54-215ENST00000617482 PFN2P35080 140 aa8.26□□□□□ -1.09
C11orf54-215ENST00000617482 TRAV13-2A0A0B4J235 113 aa8.25□□□□□ -1.09
C11orf54-215ENST00000617482 CRPP02741 224 aa8.25□□□□□ -1.09
C11orf54-215ENST00000617482 OR13C6PQ8NH95 151 aa8.25□□□□□ -1.09
C11orf54-215ENST00000617482 C11orf68Q9H3H3 251 aaKnown RBP8.25□□□□□ -1.09
C11orf54-215ENST00000617482 TRACP01848 142 aa8.25□□□□□ -1.09
C11orf54-215ENST00000617482 Q6Q795 121 aa8.25□□□□□ -1.09
C11orf54-215ENST00000617482 ANK3Q12955 4377 aaKnown RBP8.25□□□□□ -1.09
C11orf54-215ENST00000617482 NBEAL2Q6ZNJ1 2754 aa8.24□□□□□ -1.09
C11orf54-215ENST00000617482 SMR3AQ99954 134 aa8.24□□□□□ -1.09
C11orf54-215ENST00000617482 CCL18P55774 89 aa8.23□□□□□ -1.09
C11orf54-215ENST00000617482 C22orf24Q9Y442 160 aa8.23□□□□□ -1.09
C11orf54-215ENST00000617482 V9GYY9 64 aa8.23□□□□□ -1.09
C11orf54-215ENST00000617482 A0A087WZ39 114 aa8.23□□□□□ -1.09
C11orf54-215ENST00000617482 A0A096LPF7 62 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 257.1 ms