RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 FAM218AQ96MZ4 157 aa12.36□□□□□ -0.43
DDX1-207ENST00000617198 LOC100131303A0A0U1RQF7 123 aa12.35□□□□□ -0.43
DDX1-207ENST00000617198 TRBV6-4A0A1B0GX49 114 aa12.35□□□□□ -0.43
DDX1-207ENST00000617198 DNAJC9-AS1A6NH13 148 aa12.35□□□□□ -0.43
DDX1-207ENST00000617198 FAM222AQ5U5X8 452 aa12.35□□□□□ -0.43
DDX1-207ENST00000617198 RPL28P46779 137 aaKnown RBP12.34□□□□□ -0.43
DDX1-207ENST00000617198 MIR7-3HGQ8N6C7 128 aa12.34□□□□□ -0.43
DDX1-207ENST00000617198 CRPP02741 224 aa12.34□□□□□ -0.43
DDX1-207ENST00000617198 CMC4P56277 68 aaPredicted RBP12.34□□□□□ -0.43
DDX1-207ENST00000617198 CHD6Q8TD26 2715 aa12.34□□□□□ -0.43
DDX1-207ENST00000617198 FAM208BQ5VWN6 2430 aa12.33□□□□□ -0.43
DDX1-207ENST00000617198 TOMM7Q9P0U1 55 aa12.32□□□□□ -0.44
DDX1-207ENST00000617198 C22orf24Q9Y442 160 aa12.32□□□□□ -0.44
DDX1-207ENST00000617198 AKAP9Q99996 3911 aa12.32□□□□□ -0.44
DDX1-207ENST00000617198 KRTAP1-3Q8IUG1 177 aa12.32□□□□□ -0.44
DDX1-207ENST00000617198 LINC00337Q8N6G1 96 aa12.32□□□□□ -0.44
DDX1-207ENST00000617198 IMUPQ9GZP8 106 aa12.32□□□□□ -0.44
DDX1-207ENST00000617198 SND1-IT1Q9HBX3 110 aa12.32□□□□□ -0.44
DDX1-207ENST00000617198 WNK1Q9H4A3 2382 aa12.31□□□□□ -0.44
DDX1-207ENST00000617198 TRGV4A0A0C4DH28 118 aa12.31□□□□□ -0.44
DDX1-207ENST00000617198 CENPEQ02224 2701 aa12.31□□□□□ -0.44
DDX1-207ENST00000617198 PTPN13Q12923 2485 aa12.31□□□□□ -0.44
DDX1-207ENST00000617198 IGKV2-28A0A075B6P5 120 aa12.31□□□□□ -0.44
DDX1-207ENST00000617198 IGKV3OR2-268A0A0C4DH90 116 aa12.31□□□□□ -0.44
DDX1-207ENST00000617198 IGKV2D-28P01615 120 aa12.31□□□□□ -0.44
DDX1-207ENST00000617198 SMCR5Q8TEV8 140 aa12.31□□□□□ -0.44
DDX1-207ENST00000617198 WFDC10AQ9H1F0 79 aa12.31□□□□□ -0.44
DDX1-207ENST00000617198 OVOL2Q9BRP0 275 aa12.3□□□□□ -0.44
DDX1-207ENST00000617198 CHCHD5Q9BSY4 110 aa12.3□□□□□ -0.44
DDX1-207ENST00000617198 NAV2Q8IVL1 2488 aa12.3□□□□□ -0.44
DDX1-207ENST00000617198 RPL35AP18077 110 aaKnown RBP12.3□□□□□ -0.44
DDX1-207ENST00000617198 LINC00643Q86TS7 51 aa12.3□□□□□ -0.44
DDX1-207ENST00000617198 IGLV4-60A0A075B6I1 120 aa12.29□□□□□ -0.44
DDX1-207ENST00000617198 LINC00158P58513 81 aa12.29□□□□□ -0.44
DDX1-207ENST00000617198 TRBV6-8A0A0A6YYG3 113 aa12.28□□□□□ -0.44
DDX1-207ENST00000617198 IGHV3OR16-9A0A0B4J2B5 98 aa12.28□□□□□ -0.44
DDX1-207ENST00000617198 INAFM2P0DMQ5 153 aa12.28□□□□□ -0.44
DDX1-207ENST00000617198 Q9HAA7 133 aa12.28□□□□□ -0.44
DDX1-207ENST00000617198 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
DDX1-207ENST00000617198 MALP21145 153 aa12.28□□□□□ -0.44
DDX1-207ENST00000617198 SDIM1Q6ZPB5 146 aa12.28□□□□□ -0.44
DDX1-207ENST00000617198 CSNK1G2-AS1Q8NCQ2 148 aa12.27□□□□□ -0.44
DDX1-207ENST00000617198 FAM110AQ9BQ89 295 aa12.27□□□□□ -0.44
DDX1-207ENST00000617198 FAM236AA0A1B0GUQ0 79 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 FAM236BA0A1B0GV22 79 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 FHL2Q14192 279 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 SMIM11BQ8TCY0 68 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 C19orf73Q9NVV2 129 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 A0A087WZ39 114 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 IBA57-AS1B1ANH7 110 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 PLA2G2AP14555 144 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 CCL18P55774 89 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 BBC3Q96PG8 261 aaPredicted RBP12.26□□□□□ -0.45
DDX1-207ENST00000617198 LRRK2Q5S007 2527 aa12.26□□□□□ -0.45
DDX1-207ENST00000617198 DNAL4O96015 105 aa12.25□□□□□ -0.45
DDX1-207ENST00000617198 IGLV1-51P01701 117 aa12.25□□□□□ -0.45
DDX1-207ENST00000617198 ABCA12Q86UK0 2595 aa12.24□□□□□ -0.45
DDX1-207ENST00000617198 ZNF462Q96JM2 2506 aa12.24□□□□□ -0.45
DDX1-207ENST00000617198 NOTCH3Q9UM47 2321 aa12.24□□□□□ -0.45
DDX1-207ENST00000617198 C2CD3Q4AC94 2353 aa12.24□□□□□ -0.45
DDX1-207ENST00000617198 ZNF469Q96JG9 3925 aaPredicted RBP12.24□□□□□ -0.45
DDX1-207ENST00000617198 EPG5Q9HCE0 2579 aa12.23□□□□□ -0.45
DDX1-207ENST00000617198 A0A087WYN8 130 aa12.23□□□□□ -0.45
DDX1-207ENST00000617198 GAGE2AQ6NT46 116 aa12.23□□□□□ -0.45
DDX1-207ENST00000617198 SVIPQ8NHG7 77 aa12.23□□□□□ -0.45
DDX1-207ENST00000617198 H0YGX0 51 aa12.23□□□□□ -0.45
DDX1-207ENST00000617198 C5orf38Q86SI9 138 aa12.23□□□□□ -0.45
DDX1-207ENST00000617198 UBR5O95071 2799 aaPredicted RBP12.22□□□□□ -0.45
DDX1-207ENST00000617198 LINC01006Q8NI28 216 aa12.22□□□□□ -0.45
DDX1-207ENST00000617198 PFN2P35080 140 aa12.22□□□□□ -0.45
DDX1-207ENST00000617198 WFDC11Q8NEX6 87 aa12.22□□□□□ -0.45
DDX1-207ENST00000617198 TLN2Q9Y4G6 2542 aa12.21□□□□□ -0.46
DDX1-207ENST00000617198 ZNF843Q8N446 348 aa12.21□□□□□ -0.46
DDX1-207ENST00000617198 LINC00959A0A1B0GUT2 108 aa12.2□□□□□ -0.46
DDX1-207ENST00000617198 CXCL5P42830 114 aa12.2□□□□□ -0.46
DDX1-207ENST00000617198 PAX4O43316 350 aa12.19□□□□□ -0.46
DDX1-207ENST00000617198 C16orf95Q9H693 158 aa12.18□□□□□ -0.46
DDX1-207ENST00000617198 SONP18583 2426 aaKnown RBP12.18□□□□□ -0.46
DDX1-207ENST00000617198 SETXQ7Z333 2677 aaKnown RBP12.18□□□□□ -0.46
DDX1-207ENST00000617198 C6orf226Q5I0X4 101 aa12.18□□□□□ -0.46
DDX1-207ENST00000617198 CUBNO60494 3623 aa12.17□□□□□ -0.46
DDX1-207ENST00000617198 ATP5G1P05496 136 aa12.17□□□□□ -0.46
DDX1-207ENST00000617198 OR13C6PQ8NH95 151 aa12.17□□□□□ -0.46
DDX1-207ENST00000617198 LECT2O14960 151 aa12.16□□□□□ -0.46
DDX1-207ENST00000617198 DEFB130BP0DP73 79 aa12.16□□□□□ -0.46
DDX1-207ENST00000617198 DEFB130AP0DP74 79 aa12.16□□□□□ -0.46
DDX1-207ENST00000617198 C9orf129Q5T035 196 aaKnown RBP12.16□□□□□ -0.46
DDX1-207ENST00000617198 OBSCN-AS1Q96MR7 158 aa12.16□□□□□ -0.46
DDX1-207ENST00000617198 NF1P21359 2839 aa12.16□□□□□ -0.46
DDX1-207ENST00000617198 C11orf68Q9H3H3 251 aaKnown RBP12.16□□□□□ -0.46
DDX1-207ENST00000617198 JMJD1CQ15652 2540 aa12.15□□□□□ -0.46
DDX1-207ENST00000617198 ZFYVE26Q68DK2 2539 aa12.15□□□□□ -0.46
DDX1-207ENST00000617198 RNASE1P07998 156 aaKnown RBP12.15□□□□□ -0.46
DDX1-207ENST00000617198 C14orf132Q9NPU4 83 aa12.15□□□□□ -0.46
DDX1-207ENST00000617198 ITPR3Q14573 2671 aa12.15□□□□□ -0.46
DDX1-207ENST00000617198 LY6G6DO95868 133 aa12.14□□□□□ -0.47
DDX1-207ENST00000617198 XCL1P47992 114 aa12.14□□□□□ -0.47
DDX1-207ENST00000617198 KIR2DL5BQ8NHK3 375 aa12.14□□□□□ -0.47
DDX1-207ENST00000617198 SS18Q15532 418 aa12.14□□□□□ -0.47
DDX1-207ENST00000617198 APCP25054 2843 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms