RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 IGHV1-69DA0A0B4J2H0 117 aa11.11□□□□□ -0.63
NOP56-220ENST00000616692 MIFP14174 115 aa11.11□□□□□ -0.63
NOP56-220ENST00000616692 WFDC9Q8NEX5 89 aa11.11□□□□□ -0.63
NOP56-220ENST00000616692 C14orf132Q9NPU4 83 aa11.11□□□□□ -0.63
NOP56-220ENST00000616692 SUMO2P61956 95 aaKnown RBP11.1□□□□□ -0.63
NOP56-220ENST00000616692 TRBV10-3A0A0K0K1G6 114 aa11.1□□□□□ -0.63
NOP56-220ENST00000616692 IGHV1-46P01743 117 aa11.09□□□□□ -0.63
NOP56-220ENST00000616692 ECSCRQ19T08 205 aa11.09□□□□□ -0.63
NOP56-220ENST00000616692 Q1T7F1 81 aa11.09□□□□□ -0.63
NOP56-220ENST00000616692 ZNF80P51504 273 aaPredicted RBP11.08□□□□□ -0.64
NOP56-220ENST00000616692 ZNF876PQ49A33 203 aa11.08□□□□□ -0.64
NOP56-220ENST00000616692 DEFB108BQ8NET1 73 aa11.08□□□□□ -0.64
NOP56-220ENST00000616692 ENHOQ6UWT2 76 aa11.08□□□□□ -0.64
NOP56-220ENST00000616692 DNAJC9-AS1A6NH13 148 aa11.07□□□□□ -0.64
NOP56-220ENST00000616692 UBE2BP63146 152 aa11.07□□□□□ -0.64
NOP56-220ENST00000616692 TMEM141Q96I45 108 aa11.07□□□□□ -0.64
NOP56-220ENST00000616692 NDUFA4L2Q9NRX3 87 aa11.06□□□□□ -0.64
NOP56-220ENST00000616692 OBSCN-AS1Q96MR7 158 aa11.06□□□□□ -0.64
NOP56-220ENST00000616692 MEGF8Q7Z7M0 2845 aa11.06□□□□□ -0.64
NOP56-220ENST00000616692 NDPQ00604 133 aa11.05□□□□□ -0.64
NOP56-220ENST00000616692 TNCP24821 2201 aa11.05□□□□□ -0.64
NOP56-220ENST00000616692 LYRM9A8MSI8 78 aa11.05□□□□□ -0.64
NOP56-220ENST00000616692 CCL17Q92583 94 aa11.04□□□□□ -0.64
NOP56-220ENST00000616692 IGHV3-64A0A075B6Q5 118 aa11.04□□□□□ -0.64
NOP56-220ENST00000616692 UBE2L6O14933 153 aa11.04□□□□□ -0.64
NOP56-220ENST00000616692 ZFP36P26651 326 aaKnown RBP11.03□□□□□ -0.64
NOP56-220ENST00000616692 LYZP61626 148 aa11.03□□□□□ -0.64
NOP56-220ENST00000616692 PHLDA3Q9Y5J5 127 aa11.03□□□□□ -0.64
NOP56-220ENST00000616692 DYNLRB2Q8TF09 96 aa11.03□□□□□ -0.64
NOP56-220ENST00000616692 TENM1Q9UKZ4 2725 aa11.03□□□□□ -0.64
NOP56-220ENST00000616692 A0A087WWL8 130 aa11.02□□□□□ -0.65
NOP56-220ENST00000616692 PHF5AQ7RTV0 110 aaKnown RBP11.02□□□□□ -0.65
NOP56-220ENST00000616692 SOCS3O14543 225 aa11.01□□□□□ -0.65
NOP56-220ENST00000616692 SERTAD4-AS1Q5TG53 156 aa11.01□□□□□ -0.65
NOP56-220ENST00000616692 Q6ZRP5 223 aa11.01□□□□□ -0.65
NOP56-220ENST00000616692 FAM218AQ96MZ4 157 aa11.01□□□□□ -0.65
NOP56-220ENST00000616692 IGKV2-40A0A087WW87 121 aaPredicted RBP11.01□□□□□ -0.65
NOP56-220ENST00000616692 IGKV2D-40P01614 121 aaPredicted RBP11.01□□□□□ -0.65
NOP56-220ENST00000616692 WT1-ASQ06250 92 aa11.01□□□□□ -0.65
NOP56-220ENST00000616692 C9orf129Q5T035 196 aaKnown RBP11.01□□□□□ -0.65
NOP56-220ENST00000616692 SRRM5B3KS81 715 aa11□□□□□ -0.65
NOP56-220ENST00000616692 CCL24O00175 119 aa11□□□□□ -0.65
NOP56-220ENST00000616692 SAA1P0DJI8 122 aaPredicted RBP11□□□□□ -0.65
NOP56-220ENST00000616692 SAA2P0DJI9 122 aaPredicted RBP11□□□□□ -0.65
NOP56-220ENST00000616692 Q8TAT8 98 aa11□□□□□ -0.65
NOP56-220ENST00000616692 Q9HAA7 133 aa11□□□□□ -0.65
NOP56-220ENST00000616692 TRBV7-4A0A0J9YYF1 115 aa10.99□□□□□ -0.65
NOP56-220ENST00000616692 RPL39LQ96EH5 51 aaKnown RBP10.99□□□□□ -0.65
NOP56-220ENST00000616692 FUSP35637 526 aaKnown RBP eCLIP10.98□□□□□ -0.65
NOP56-220ENST00000616692 IGHV4-4A0A075B6R2 117 aa10.98□□□□□ -0.65
NOP56-220ENST00000616692 ZNF580Q9UK33 172 aa10.98□□□□□ -0.65
NOP56-220ENST00000616692 MGAM2Q2M2H8 2515 aa10.97□□□□□ -0.65
NOP56-220ENST00000616692 IGHV3-30-3P0DP02 117 aa10.97□□□□□ -0.65
NOP56-220ENST00000616692 CD28P10747 220 aa10.97□□□□□ -0.65
NOP56-220ENST00000616692 CLPSL1A2RUU4 121 aa10.97□□□□□ -0.65
NOP56-220ENST00000616692 Q6YL49 198 aa10.97□□□□□ -0.65
NOP56-220ENST00000616692 A8MUN3 132 aa10.96□□□□□ -0.65
NOP56-220ENST00000616692 PSPHP1O15172 72 aa10.96□□□□□ -0.65
NOP56-220ENST00000616692 PDE6HQ13956 83 aa10.96□□□□□ -0.65
NOP56-220ENST00000616692 PLXNB1O43157 2135 aa10.96□□□□□ -0.66
NOP56-220ENST00000616692 C15orf32Q32M92 178 aa10.96□□□□□ -0.66
NOP56-220ENST00000616692 SPANXN1Q5VSR9 72 aa10.96□□□□□ -0.66
NOP56-220ENST00000616692 LCA10Q71F78 164 aa10.96□□□□□ -0.66
NOP56-220ENST00000616692 M0R381 172 aa10.95□□□□□ -0.66
NOP56-220ENST00000616692 IGKV1-16P04430 117 aa10.95□□□□□ -0.66
NOP56-220ENST00000616692 PIK3CD-AS1Q5SR53 167 aa10.95□□□□□ -0.66
NOP56-220ENST00000616692 CLEC19AQ6UXS0 136 aa10.95□□□□□ -0.66
NOP56-220ENST00000616692 TRAV10A0A0B4J240 114 aa10.95□□□□□ -0.66
NOP56-220ENST00000616692 Q6ZTC4 211 aa10.95□□□□□ -0.66
NOP56-220ENST00000616692 Q8N6K4 173 aa10.95□□□□□ -0.66
NOP56-220ENST00000616692 H3BRN7 92 aa10.94□□□□□ -0.66
NOP56-220ENST00000616692 TFF1P04155 84 aa10.94□□□□□ -0.66
NOP56-220ENST00000616692 SYCNQ0VAF6 134 aa10.94□□□□□ -0.66
NOP56-220ENST00000616692 OPRPNQ99935 248 aaPredicted RBP10.94□□□□□ -0.66
NOP56-220ENST00000616692 OVOL2Q9BRP0 275 aa10.94□□□□□ -0.66
NOP56-220ENST00000616692 IGHV7-4-1A0A0J9YVY3 117 aa10.94□□□□□ -0.66
NOP56-220ENST00000616692 IGHV4-38-2P0DP08 117 aa10.94□□□□□ -0.66
NOP56-220ENST00000616692 NDUFA12Q9UI09 145 aa10.94□□□□□ -0.66
NOP56-220ENST00000616692 A8MU10 97 aa10.93□□□□□ -0.66
NOP56-220ENST00000616692 RPL39P62891 51 aaKnown RBP10.93□□□□□ -0.66
NOP56-220ENST00000616692 HCP5Q6MZN7 132 aa10.93□□□□□ -0.66
NOP56-220ENST00000616692 BUB1B-PAK6H3BSN5 160 aa10.93□□□□□ -0.66
NOP56-220ENST00000616692 IGKV3D-20A0A0C4DH25 116 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 hDV103S1A0JD37 113 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 SVEP1Q4LDE5 3571 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 PPP1R17O96001 155 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 DEFB112Q30KQ8 113 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 TMEM254Q8TBM7 123 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 LEAP2Q969E1 77 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 TRAV22A0A0B4J277 110 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 IGHV3-64DA0A0J9YX35 117 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 C7orf65Q6ZTY9 151 aa10.92□□□□□ -0.66
NOP56-220ENST00000616692 IGHV1-69P01742 117 aa10.91□□□□□ -0.66
NOP56-220ENST00000616692 C10orf55Q5SWW7 151 aa10.91□□□□□ -0.66
NOP56-220ENST00000616692 FAM19A3Q7Z5A8 133 aa10.91□□□□□ -0.66
NOP56-220ENST00000616692 ZNF625Q96I27 306 aaPredicted RBP10.91□□□□□ -0.66
NOP56-220ENST00000616692 A6NN06 94 aa10.9□□□□□ -0.66
NOP56-220ENST00000616692 NCR3O14931 201 aa10.9□□□□□ -0.67
NOP56-220ENST00000616692 UBL5Q9BZL1 73 aa10.9□□□□□ -0.67
NOP56-220ENST00000616692 ERC2-IT1O76042 136 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms