RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 IGKV4-1P06312 121 aa4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 CARD19Q96LW7 228 aa4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 ESM1Q9NQ30 184 aa4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 SPANXB1Q9NS25 103 aaPredicted RBP4.12□□□□□ -1.75
SYNCRIP-204ENST00000616122 F5H768 121 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 DAZ2Q13117 558 aaKnown RBP4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 DAZ4Q86SG3 579 aaKnown RBP4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 DAZ3Q9NR90 486 aaKnown RBP4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 Q9UF83 564 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 TCL1BO95988 128 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 INSL3P51460 131 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 WFDC10AQ9H1F0 79 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 PIK3CD-AS1Q5SR53 167 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 ZFAND6Q6FIF0 208 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 ATP6V0E2Q8NHE4 81 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 TSPEAR-AS2P59090 65 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 RAI1Q7Z5J4 1906 aaPredicted RBP4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 RS1O15537 224 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 XCL1P47992 114 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 SS18Q15532 418 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
SYNCRIP-204ENST00000616122 TMEM223A0PJW6 202 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 K7EQD1 137 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 IGLV4-69A0A075B6H9 119 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 DAD1P61803 113 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 SND1-IT1Q9HBX3 110 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 IGHV3-30P01768 117 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 ANGP03950 147 aaKnown RBP4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 IGHV3-30-5P0DP03 117 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 GYPEP15421 78 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 TENM1Q9UKZ4 2725 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 A0A0U1RQV1 116 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 INAFM2P0DMQ5 153 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 MRPS36P82909 103 aaKnown RBP4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 UBE2WQ96B02 151 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 PRO0255Q9UI72 69 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 H3BT86 120 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 TIRAPP58753 221 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 DEFB135Q30KP9 77 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 LINC00242Q5T6M2 205 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 CASC2Q6XLA1 102 aa4.1□□□□□ -1.75
SYNCRIP-204ENST00000616122 ZNF575Q86XF7 245 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 MIR7-3HGQ8N6C7 128 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 POM121L12Q8N7R1 296 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 C16orf74Q96GX8 76 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 A0A0B4J2C4 111 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 CLPSL2Q6UWE3 100 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 FAM19A4Q96LR4 140 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 IGLV10-54A0A075B6I4 117 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 DEFB4AO15263 64 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 MIAQ16674 131 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 VWFP04275 2813 aa4.09□□□□□ -1.75
SYNCRIP-204ENST00000616122 TINCRA0A1B0GVN0 87 aa4.09□□□□□ -1.76
SYNCRIP-204ENST00000616122 HERV-K104P63124 156 aa4.09□□□□□ -1.76
SYNCRIP-204ENST00000616122 PLAC4Q8WY50 150 aa4.09□□□□□ -1.76
SYNCRIP-204ENST00000616122 RELNP78509 3460 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 FBN1P35555 2871 aaKnown RBP4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 C15orf53Q8NAA6 179 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 ICOSQ9Y6W8 199 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 LINC00308Q8TCZ7 52 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 ATP5G1P05496 136 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 TRBV6-4A0A1B0GX49 114 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 TRIAP1O43715 76 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 NDUFA7O95182 113 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 CLEC2BQ92478 149 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 UBE2D4Q9Y2X8 147 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 HILS1P60008 231 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 UBE2D3P61077 147 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 UBE2D2P62837 147 aa4.08□□□□□ -1.76
SYNCRIP-204ENST00000616122 TRAV13-2A0A0B4J235 113 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 TRAV4A0A0B4J268 109 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 TRBV10-2A0A0K0K1G8 114 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 AMELXQ99217 191 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 BEAN1Q3B7T3 259 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 LINC01546A6NGU7 62 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 Q6ZSN1 163 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 SPANXCQ9NY87 97 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 IGLV1-51P01701 117 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 PDZD2O15018 2839 aa4.07□□□□□ -1.76
SYNCRIP-204ENST00000616122 TEX49A0A1B0GTD5 131 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 BAALC-AS2P0C853 105 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 GAGE2AQ6NT46 116 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 PSORS1C2Q9UIG4 136 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 LINC00694P0DN24 101 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 COX7B2Q8TF08 81 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 TRBV6-8A0A0A6YYG3 113 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 H0YGX0 51 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 HAMPP81172 84 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 TRBV30A0A0K0K1B3 111 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 MRPL23Q16540 153 aaKnown RBP4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 ADAMTSL4-AS1Q5T5F5 129 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 LINC00482Q8N8I6 264 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 C11orf72Q8NBR9 251 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 CDC42SE2Q9NRR3 84 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 SPART-AS1P0CW21 52 aa4.06□□□□□ -1.76
SYNCRIP-204ENST00000616122 LECT2O14960 151 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 C3orf56Q8N813 242 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 LOC100131303A0A0U1RQF7 123 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 SMIM1B2RUZ4 78 aa4.05□□□□□ -1.76
SYNCRIP-204ENST00000616122 MT-ATP8P03928 68 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms