RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 RPL36ALQ969Q0 106 aaKnown RBP7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 A0A087WYN8 130 aa7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 TRAV13-2A0A0B4J235 113 aa7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 NDUFC2O95298 119 aa7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 LINC00158P58513 81 aa7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 ENHOQ6UWT2 76 aa7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 BRK1Q8WUW1 75 aa7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 FASNP49327 2511 aaKnown RBP7.54□□□□□ -1.2
TNFAIP3-208ENST00000615468 ACANP16112 2415 aa7.53□□□□□ -1.2
TNFAIP3-208ENST00000615468 ANKRD17O75179 2603 aaKnown RBP7.53□□□□□ -1.2
TNFAIP3-208ENST00000615468 COX6A2Q02221 97 aa7.53□□□□□ -1.2
TNFAIP3-208ENST00000615468 C9orf85Q96MD7 179 aa7.53□□□□□ -1.2
TNFAIP3-208ENST00000615468 ABCA2Q9BZC7 2435 aa7.53□□□□□ -1.2
TNFAIP3-208ENST00000615468 EDN2P20800 178 aa7.53□□□□□ -1.2
TNFAIP3-208ENST00000615468 PRM2P04554 102 aa7.53□□□□□ -1.2
TNFAIP3-208ENST00000615468 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
TNFAIP3-208ENST00000615468 UBE2D4Q9Y2X8 147 aa7.53□□□□□ -1.2
TNFAIP3-208ENST00000615468 MTORP42345 2549 aa7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 SNRPD3P62318 126 aaKnown RBP7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 RBM3P98179 157 aaKnown RBP7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 BEAN1Q3B7T3 259 aa7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 C19orf54Q5BKX5 351 aa7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 SND1-IT1Q9HBX3 110 aa7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 C11orf71Q6IPW1 123 aa7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 BBC3Q96PG8 261 aaPredicted RBP7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 C22orf24Q9Y442 160 aa7.52□□□□□ -1.21
TNFAIP3-208ENST00000615468 PAX4O43316 350 aa7.51□□□□□ -1.21
TNFAIP3-208ENST00000615468 RPL28P46779 137 aaKnown RBP7.51□□□□□ -1.21
TNFAIP3-208ENST00000615468 OVOL2Q9BRP0 275 aa7.51□□□□□ -1.21
TNFAIP3-208ENST00000615468 APRG1Q8IVJ8 170 aa7.51□□□□□ -1.21
TNFAIP3-208ENST00000615468 SNURFQ9Y675 71 aa7.51□□□□□ -1.21
TNFAIP3-208ENST00000615468 IGHV4-61A0A0C4DH41 118 aa7.51□□□□□ -1.21
TNFAIP3-208ENST00000615468 MIR7-3HGQ8N6C7 128 aa7.51□□□□□ -1.21
TNFAIP3-208ENST00000615468 ZANQ9Y493 2812 aa7.51□□□□□ -1.21
TNFAIP3-208ENST00000615468 XCL1P47992 114 aa7.5□□□□□ -1.21
TNFAIP3-208ENST00000615468 S100A7L2Q5SY68 101 aa7.5□□□□□ -1.21
TNFAIP3-208ENST00000615468 XCL2Q9UBD3 114 aa7.5□□□□□ -1.21
TNFAIP3-208ENST00000615468 CHD6Q8TD26 2715 aa7.5□□□□□ -1.21
TNFAIP3-208ENST00000615468 FAM104AQ969W3 186 aa7.5□□□□□ -1.21
TNFAIP3-208ENST00000615468 SMIM11BQ8TCY0 68 aa7.5□□□□□ -1.21
TNFAIP3-208ENST00000615468 PSMB8P28062 276 aa7.49□□□□□ -1.21
TNFAIP3-208ENST00000615468 CHCHD7Q9BUK0 85 aa7.49□□□□□ -1.21
TNFAIP3-208ENST00000615468 IGHV4-30-2A0A087WSY4 118 aa7.49□□□□□ -1.21
TNFAIP3-208ENST00000615468 CSMD2Q7Z408 3487 aa7.49□□□□□ -1.21
TNFAIP3-208ENST00000615468 CELSR2Q9HCU4 2923 aa7.49□□□□□ -1.21
TNFAIP3-208ENST00000615468 LINC00337Q8N6G1 96 aa7.49□□□□□ -1.21
TNFAIP3-208ENST00000615468 C5orf56Q8N8D9 126 aa7.49□□□□□ -1.21
TNFAIP3-208ENST00000615468 UBL5Q9BZL1 73 aa7.48□□□□□ -1.21
TNFAIP3-208ENST00000615468 HECTD1Q9ULT8 2610 aa7.48□□□□□ -1.21
TNFAIP3-208ENST00000615468 SERP1Q9Y6X1 66 aa7.48□□□□□ -1.21
TNFAIP3-208ENST00000615468 H0YGX0 51 aa7.48□□□□□ -1.21
TNFAIP3-208ENST00000615468 HAMPP81172 84 aa7.48□□□□□ -1.21
TNFAIP3-208ENST00000615468 LINC00242Q5T6M2 205 aa7.48□□□□□ -1.21
TNFAIP3-208ENST00000615468 ORMDL1Q9P0S3 153 aa7.48□□□□□ -1.21
TNFAIP3-208ENST00000615468 MOB4Q9Y3A3 225 aa7.48□□□□□ -1.21
TNFAIP3-208ENST00000615468 IGHV3OR16-12A0A075B7B8 117 aa7.47□□□□□ -1.21
TNFAIP3-208ENST00000615468 Q6ZSN1 163 aa7.47□□□□□ -1.21
TNFAIP3-208ENST00000615468 C11orf68Q9H3H3 251 aaKnown RBP7.47□□□□□ -1.21
TNFAIP3-208ENST00000615468 SMIM1B2RUZ4 78 aa7.47□□□□□ -1.21
TNFAIP3-208ENST00000615468 V9GYY9 64 aa7.47□□□□□ -1.21
TNFAIP3-208ENST00000615468 NDUFC2-KCTD14E9PQ53 114 aa7.46□□□□□ -1.21
TNFAIP3-208ENST00000615468 LMO4P61968 165 aa7.46□□□□□ -1.21
TNFAIP3-208ENST00000615468 IGHV4-38-2P0DP08 117 aa7.46□□□□□ -1.22
TNFAIP3-208ENST00000615468 PF4P02776 101 aa7.46□□□□□ -1.22
TNFAIP3-208ENST00000615468 C1orf195Q5TG92 126 aa7.45□□□□□ -1.22
TNFAIP3-208ENST00000615468 MPLKIPQ8TAP9 179 aa7.45□□□□□ -1.22
TNFAIP3-208ENST00000615468 USMG5Q96IX5 58 aa7.45□□□□□ -1.22
TNFAIP3-208ENST00000615468 SEC61GP60059 68 aa7.45□□□□□ -1.22
TNFAIP3-208ENST00000615468 SMIM26A0A096LP01 95 aa7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 F8WEM9 126 aa7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 IGHV3-53P01767 116 aa7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 CCKP06307 115 aa7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 RMI2Q96E14 147 aa7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 SIRPDQ9H106 197 aa7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 IGLV5-39A0A0G2JS06 123 aa7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 H3BUX3 64 aa7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 UBE2L6O14933 153 aa7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 HELZ2Q9BYK8 2649 aaKnown RBP7.44□□□□□ -1.22
TNFAIP3-208ENST00000615468 BLCAPP62952 87 aa7.43□□□□□ -1.22
TNFAIP3-208ENST00000615468 LINC00474Q9P2X8 69 aa7.43□□□□□ -1.22
TNFAIP3-208ENST00000615468 VPS13CQ709C8 3753 aa7.43□□□□□ -1.22
TNFAIP3-208ENST00000615468 F8WDY8 70 aa7.43□□□□□ -1.22
TNFAIP3-208ENST00000615468 KRTAP10-9P60411 292 aa7.43□□□□□ -1.22
TNFAIP3-208ENST00000615468 CFHR3Q02985 330 aa7.42□□□□□ -1.22
TNFAIP3-208ENST00000615468 TMEM86BQ8N661 226 aa7.42□□□□□ -1.22
TNFAIP3-208ENST00000615468 IGKV2-28A0A075B6P5 120 aa7.41□□□□□ -1.22
TNFAIP3-208ENST00000615468 IGKV2D-28P01615 120 aa7.41□□□□□ -1.22
TNFAIP3-208ENST00000615468 H7BZZ5 65 aa7.41□□□□□ -1.22
TNFAIP3-208ENST00000615468 CCL18P55774 89 aa7.41□□□□□ -1.22
TNFAIP3-208ENST00000615468 KHDC1LQ5JSQ8 128 aa7.41□□□□□ -1.22
TNFAIP3-208ENST00000615468 IGLV5-45A0A087WSX0 123 aa7.41□□□□□ -1.22
TNFAIP3-208ENST00000615468 DEFB131AP59861 70 aa7.4□□□□□ -1.22
TNFAIP3-208ENST00000615468 ATP5EP2Q5VTU8 51 aa7.4□□□□□ -1.22
TNFAIP3-208ENST00000615468 ZNF843Q8N446 348 aa7.4□□□□□ -1.22
TNFAIP3-208ENST00000615468 COX7B2Q8TF08 81 aa7.4□□□□□ -1.22
TNFAIP3-208ENST00000615468 JMJD7-PLA2G4BH0Y9G9 81 aa7.4□□□□□ -1.22
TNFAIP3-208ENST00000615468 Q6ZTI0 123 aa7.4□□□□□ -1.22
TNFAIP3-208ENST00000615468 LAMTOR3Q9UHA4 124 aa7.4□□□□□ -1.22
TNFAIP3-208ENST00000615468 TRAV7A0A075B6U4 112 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms