RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 A0A0J9YXV3 536 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 VCYO14598 125 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 SNRPD3P62318 126 aaKnown RBP7.23□□□□□ -1.25
GGA3-221ENST00000614198 ODF3L2Q3SX64 289 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 MRPL53Q96EL3 112 aaKnown RBP7.23□□□□□ -1.25
GGA3-221ENST00000614198 LINC00526Q96FQ7 95 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 TMEM223A0PJW6 202 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 WIPF1O43516 503 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 LINC00477Q96M19 166 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 MAP6D1Q9H9H5 199 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 PF4P02776 101 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 ZNF22P17026 224 aaPredicted RBP7.23□□□□□ -1.25
GGA3-221ENST00000614198 GAGE2AQ6NT46 116 aa7.23□□□□□ -1.25
GGA3-221ENST00000614198 ACYP1P07311 99 aa7.22□□□□□ -1.25
GGA3-221ENST00000614198 IGHV3-73A0A0B4J1V6 119 aa7.22□□□□□ -1.25
GGA3-221ENST00000614198 KIR2DL5BQ8NHK3 375 aa7.22□□□□□ -1.25
GGA3-221ENST00000614198 SPANXCQ9NY87 97 aa7.22□□□□□ -1.25
GGA3-221ENST00000614198 ICOSQ9Y6W8 199 aa7.22□□□□□ -1.25
GGA3-221ENST00000614198 SUMO4Q6EEV6 95 aa7.21□□□□□ -1.25
GGA3-221ENST00000614198 C1orf43Q9BWL3 253 aa7.21□□□□□ -1.25
GGA3-221ENST00000614198 PKIGQ9Y2B9 76 aa7.21□□□□□ -1.25
GGA3-221ENST00000614198 ATP5G1P05496 136 aa7.21□□□□□ -1.26
GGA3-221ENST00000614198 RPS28P62857 69 aaKnown RBP7.21□□□□□ -1.26
GGA3-221ENST00000614198 DAND5Q8N907 189 aa7.21□□□□□ -1.26
GGA3-221ENST00000614198 FAM19A4Q96LR4 140 aa7.21□□□□□ -1.26
GGA3-221ENST00000614198 IGHV3OR16-12A0A075B7B8 117 aa7.21□□□□□ -1.26
GGA3-221ENST00000614198 hADV29S1A0JD25 119 aa7.21□□□□□ -1.26
GGA3-221ENST00000614198 POLR2KP53803 58 aaKnown RBP7.2□□□□□ -1.26
GGA3-221ENST00000614198 MGAM2Q2M2H8 2515 aa7.2□□□□□ -1.26
GGA3-221ENST00000614198 LST1O00453 97 aa7.2□□□□□ -1.26
GGA3-221ENST00000614198 MED14OSP0DP75 135 aa7.2□□□□□ -1.26
GGA3-221ENST00000614198 ZNF625Q96I27 306 aaPredicted RBP7.2□□□□□ -1.26
GGA3-221ENST00000614198 DSCR8Q96T75 97 aa7.2□□□□□ -1.26
GGA3-221ENST00000614198 XCL2Q9UBD3 114 aa7.2□□□□□ -1.26
GGA3-221ENST00000614198 LENEPQ9Y5L5 61 aa7.2□□□□□ -1.26
GGA3-221ENST00000614198 LINC00482Q8N8I6 264 aa7.2□□□□□ -1.26
GGA3-221ENST00000614198 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
GGA3-221ENST00000614198 RPL35AP18077 110 aaKnown RBP7.19□□□□□ -1.26
GGA3-221ENST00000614198 LINC00643Q86TS7 51 aa7.19□□□□□ -1.26
GGA3-221ENST00000614198 TIMM21Q9BVV7 248 aa7.19□□□□□ -1.26
GGA3-221ENST00000614198 A8MZ25 164 aa7.18□□□□□ -1.26
GGA3-221ENST00000614198 TENM3Q9P273 2699 aa7.18□□□□□ -1.26
GGA3-221ENST00000614198 KLLNB2CW77 178 aa7.18□□□□□ -1.26
GGA3-221ENST00000614198 LINC00315P59091 139 aa7.18□□□□□ -1.26
GGA3-221ENST00000614198 LITAFQ99732 161 aa7.18□□□□□ -1.26
GGA3-221ENST00000614198 KIF25-AS1Q9Y6Z4 181 aa7.18□□□□□ -1.26
GGA3-221ENST00000614198 IGLV1-51P01701 117 aa7.17□□□□□ -1.26
GGA3-221ENST00000614198 RNASE3P12724 160 aaKnown RBP7.17□□□□□ -1.26
GGA3-221ENST00000614198 COX7CP15954 63 aa7.17□□□□□ -1.26
GGA3-221ENST00000614198 NDUFA12Q9UI09 145 aa7.17□□□□□ -1.26
GGA3-221ENST00000614198 NXPH4O95158 308 aa7.17□□□□□ -1.26
GGA3-221ENST00000614198 CRYGAP11844 174 aa7.17□□□□□ -1.26
GGA3-221ENST00000614198 OXLD1Q5BKU9 147 aa7.17□□□□□ -1.26
GGA3-221ENST00000614198 SDIM1Q6ZPB5 146 aa7.17□□□□□ -1.26
GGA3-221ENST00000614198 SMCR5Q8TEV8 140 aa7.17□□□□□ -1.26
GGA3-221ENST00000614198 CXCL5P42830 114 aa7.16□□□□□ -1.26
GGA3-221ENST00000614198 TRBV27A0A0K0K1C4 114 aa7.16□□□□□ -1.26
GGA3-221ENST00000614198 I3L3M4 83 aa7.16□□□□□ -1.26
GGA3-221ENST00000614198 IGHV3-30-3P0DP02 117 aa7.15□□□□□ -1.26
GGA3-221ENST00000614198 C5orf38Q86SI9 138 aa7.15□□□□□ -1.26
GGA3-221ENST00000614198 C19orf73Q9NVV2 129 aa7.15□□□□□ -1.26
GGA3-221ENST00000614198 C2orf48Q96LS8 159 aa7.15□□□□□ -1.26
GGA3-221ENST00000614198 DGAT2L7PQ6IED9 249 aa7.15□□□□□ -1.27
GGA3-221ENST00000614198 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 TRBV6-5A0A0K0K1A5 114 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 GIG44P09565 113 aaPredicted RBP7.14□□□□□ -1.27
GGA3-221ENST00000614198 ADAMTSL4-AS1Q5T5F5 129 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 STHQ8IWL8 128 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 CYSTM1Q9H1C7 97 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 DNHD1Q96M86 4753 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 TRAV13-1A0A0B4J241 112 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 TRACP01848 142 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 MIAQ16674 131 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 Q9UF83 564 aa7.14□□□□□ -1.27
GGA3-221ENST00000614198 PRB2P02812 416 aaPredicted RBP7.13□□□□□ -1.27
GGA3-221ENST00000614198 RHOHQ15669 191 aa7.13□□□□□ -1.27
GGA3-221ENST00000614198 HIST1H4AP62805 103 aaKnown RBP7.13□□□□□ -1.27
GGA3-221ENST00000614198 IGHV3-38A0A0C4DH36 116 aa7.12□□□□□ -1.27
GGA3-221ENST00000614198 C1orf158Q8N1D5 194 aa7.12□□□□□ -1.27
GGA3-221ENST00000614198 IGHV3-16A0A0C4DH30 117 aa7.11□□□□□ -1.27
GGA3-221ENST00000614198 ATOX1O00244 68 aa7.11□□□□□ -1.27
GGA3-221ENST00000614198 C20orf203Q8NBC4 194 aa7.11□□□□□ -1.27
GGA3-221ENST00000614198 IGHV1OR15-1A0A075B7D0 117 aa7.11□□□□□ -1.27
GGA3-221ENST00000614198 BEAN1Q3B7T3 259 aa7.11□□□□□ -1.27
GGA3-221ENST00000614198 IGLV4-3A0A075B6K6 122 aa7.11□□□□□ -1.27
GGA3-221ENST00000614198 A0A0U1RQV1 116 aa7.11□□□□□ -1.27
GGA3-221ENST00000614198 CIRBPQ14011 172 aaKnown RBP7.11□□□□□ -1.27
GGA3-221ENST00000614198 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.1□□□□□ -1.27
GGA3-221ENST00000614198 IGKV2-29A2NJV5 120 aaPredicted RBP7.1□□□□□ -1.27
GGA3-221ENST00000614198 MDFIQ99750 246 aa7.1□□□□□ -1.27
GGA3-221ENST00000614198 DEFB4AO15263 64 aa7.1□□□□□ -1.27
GGA3-221ENST00000614198 DPH3Q96FX2 82 aa7.1□□□□□ -1.27
GGA3-221ENST00000614198 CSMD3Q7Z407 3707 aa7.1□□□□□ -1.27
GGA3-221ENST00000614198 DNAH3Q8TD57 4116 aa7.1□□□□□ -1.27
GGA3-221ENST00000614198 TMEM258P61165 79 aa7.1□□□□□ -1.27
GGA3-221ENST00000614198 IGHV1-58A0A0C4DH39 117 aa7.09□□□□□ -1.27
GGA3-221ENST00000614198 OXTP01178 125 aa7.09□□□□□ -1.27
GGA3-221ENST00000614198 KRTAP10-11P60412 298 aa7.09□□□□□ -1.27
GGA3-221ENST00000614198 M0QY20 66 aa7.08□□□□□ -1.28
GGA3-221ENST00000614198 TIMM17BO60830 172 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms