RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 CEND1Q8N111 149 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 Q9HAA7 133 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 PHLDA3Q9Y5J5 127 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 TRAV26-2A0A0B4J265 109 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 TRAV21A0A0B4J279 112 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 TEX48A0A1B0GUV7 120 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 GAGE12JA6NER3 117 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 E9PLD3 99 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 PRSS1P07477 247 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 GAGE4Q13068 117 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 GAGE5Q13069 117 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 ZC2HC1BQ5TFG8 222 aa3.46□□□□□ -1.86
SYCP1-209ENST00000613524 MRPL35Q9NZE8 188 aaKnown RBP3.46□□□□□ -1.86
SYCP1-209ENST00000613524 PLAC8L1A1L4L8 177 aa3.45□□□□□ -1.86
SYCP1-209ENST00000613524 A0A087WX48 190 aa3.45□□□□□ -1.86
SYCP1-209ENST00000613524 IGKV3OR2-268A0A0C4DH90 116 aa3.45□□□□□ -1.86
SYCP1-209ENST00000613524 LCE6AA0A183 80 aa3.45□□□□□ -1.86
SYCP1-209ENST00000613524 KLLNB2CW77 178 aa3.45□□□□□ -1.86
SYCP1-209ENST00000613524 ZNF56Q15929 161 aa3.45□□□□□ -1.86
SYCP1-209ENST00000613524 SPANXN1Q5VSR9 72 aa3.45□□□□□ -1.86
SYCP1-209ENST00000613524 NHP2Q9NX24 153 aaKnown RBP3.45□□□□□ -1.86
SYCP1-209ENST00000613524 RYR2Q92736 4967 aa3.45□□□□□ -1.86
SYCP1-209ENST00000613524 DNAH10Q8IVF4 4471 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 TRBV7-3A0A075B6L6 115 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 IGLV5-39A0A0G2JS06 123 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 LECT2O14960 151 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 IGHV3-30P01768 117 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 IGHV3-33P01772 117 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 IGHV3-30-3P0DP02 117 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 IGHV3-30-5P0DP03 117 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 ASIPP42127 132 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 LAGE3Q14657 143 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 CLPSL2Q6UWE3 100 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 C14orf178Q8N769 122 aaPredicted RBP3.44□□□□□ -1.86
SYCP1-209ENST00000613524 C11orf68Q9H3H3 251 aaKnown RBP3.44□□□□□ -1.86
SYCP1-209ENST00000613524 SPANXB1Q9NS25 103 aaPredicted RBP3.44□□□□□ -1.86
SYCP1-209ENST00000613524 A0A1B0GWB2 263 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 WFDC2Q14508 124 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 TAL2Q16559 108 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 PRO0461Q9UI25 63 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 TRAV12-1A0A0B4J245 112 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 SMIM9A6NGZ8 99 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 HAMPP81172 84 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 C11orf72Q8NBR9 251 aa3.44□□□□□ -1.86
SYCP1-209ENST00000613524 TMEM262E9PQX1 116 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 CCL18P55774 89 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 RASL10AQ92737 203 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 APLNQ9ULZ1 77 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 LYRM9A8MSI8 78 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 F8W1H4 67 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 PLNP26678 52 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 ESRGQ1W209 222 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 POM121L12Q8N7R1 296 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 TOMM6Q96B49 74 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 MRAP2Q96G30 205 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 SMIM2Q9BVW6 85 aa3.43□□□□□ -1.86
SYCP1-209ENST00000613524 IGLV5-45A0A087WSX0 123 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 F8VRH5 84 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 H3BMG7 143 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.42□□□□□ -1.86
SYCP1-209ENST00000613524 H7C1H1 209 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 SH2D6Q7Z4S9 175 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 SLC25A29Q8N8R3 303 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 VSIG2Q96IQ7 327 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 LINC00588Q9Y4M8 146 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 VPS13DQ5THJ4 4388 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 MYMXA0A1B0GTQ4 84 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 M0R2P5 195 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 RNASE3P12724 160 aaKnown RBP3.42□□□□□ -1.86
SYCP1-209ENST00000613524 WFDC10BQ8IUB3 73 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 ZNRF2Q8NHG8 242 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 RPL39LQ96EH5 51 aaKnown RBP3.42□□□□□ -1.86
SYCP1-209ENST00000613524 DNAJC30Q96LL9 226 aa3.42□□□□□ -1.86
SYCP1-209ENST00000613524 DNAH1Q9P2D7 4330 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 LINC01547P58512 204 aaPredicted RBP3.41□□□□□ -1.86
SYCP1-209ENST00000613524 BAALCQ8WXS3 180 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 FAM19A4Q96LR4 140 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 HIST1H4GQ99525 98 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 CRYGDP07320 174 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 ETDBQ3ZM63 59 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 MTURNQ8N3F0 131 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 SCGB3A1Q96QR1 104 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 C20orf78Q9BR46 151 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 GTSF1LQ9H1H1 148 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 LENEPQ9Y5L5 61 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 NXPH4O95158 308 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 SCGB1A1P11684 91 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 LINC00315P59091 139 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 FHL2Q14192 279 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 ORMDL2Q53FV1 153 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 CFAP126Q5VTH2 177 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 PLEKHB2Q96CS7 222 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 SIGMAR1Q99720 223 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 PRO0255Q9UI72 69 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 ICOSQ9Y6W8 199 aa3.41□□□□□ -1.86
SYCP1-209ENST00000613524 FLG2Q5D862 2391 aaPredicted RBP3.41□□□□□ -1.86
SYCP1-209ENST00000613524 PKHD1P08F94 4074 aa3.4□□□□□ -1.86
SYCP1-209ENST00000613524 K7EQD1 137 aa3.4□□□□□ -1.86
SYCP1-209ENST00000613524 UBE2D1P51668 147 aa3.4□□□□□ -1.86
SYCP1-209ENST00000613524 C2orf66Q6UXQ4 117 aa3.4□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms