RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 UBE2D1P51668 147 aa9.49□□□□□ -0.89
TCF3-220ENST00000611869 FAM19A4Q96LR4 140 aa9.49□□□□□ -0.89
TCF3-220ENST00000611869 LECT2O14960 151 aa9.49□□□□□ -0.89
TCF3-220ENST00000611869 NDUFA1O15239 70 aa9.49□□□□□ -0.89
TCF3-220ENST00000611869 LINC00315P59091 139 aa9.49□□□□□ -0.89
TCF3-220ENST00000611869 NCR3O14931 201 aa9.48□□□□□ -0.89
TCF3-220ENST00000611869 TRIAP1O43715 76 aa9.48□□□□□ -0.89
TCF3-220ENST00000611869 LINC00694P0DN24 101 aa9.48□□□□□ -0.89
TCF3-220ENST00000611869 CHCHD10Q8WYQ3 142 aaPredicted RBP9.48□□□□□ -0.89
TCF3-220ENST00000611869 CHCHD7Q9BUK0 85 aa9.48□□□□□ -0.89
TCF3-220ENST00000611869 H0YGX0 51 aa9.48□□□□□ -0.89
TCF3-220ENST00000611869 POM121L12Q8N7R1 296 aa9.47□□□□□ -0.89
TCF3-220ENST00000611869 KLK9Q2XQG4 91 aa9.47□□□□□ -0.89
TCF3-220ENST00000611869 ORMDL1Q9P0S3 153 aa9.47□□□□□ -0.89
TCF3-220ENST00000611869 H7C423 109 aa9.47□□□□□ -0.89
TCF3-220ENST00000611869 LINC00242Q5T6M2 205 aa9.47□□□□□ -0.89
TCF3-220ENST00000611869 Q8N2B8 174 aa9.47□□□□□ -0.89
TCF3-220ENST00000611869 SPANXCQ9NY87 97 aa9.47□□□□□ -0.89
TCF3-220ENST00000611869 CDC42SE2Q9NRR3 84 aa9.46□□□□□ -0.89
TCF3-220ENST00000611869 ATMQ13315 3056 aa9.46□□□□□ -0.9
TCF3-220ENST00000611869 H3BT86 120 aa9.46□□□□□ -0.9
TCF3-220ENST00000611869 OXLD1Q5BKU9 147 aa9.46□□□□□ -0.9
TCF3-220ENST00000611869 MIFP14174 115 aa9.45□□□□□ -0.9
TCF3-220ENST00000611869 CXCL5P42830 114 aa9.45□□□□□ -0.9
TCF3-220ENST00000611869 HIGD2BQ4VC39 106 aa9.45□□□□□ -0.9
TCF3-220ENST00000611869 CCL18P55774 89 aa9.45□□□□□ -0.9
TCF3-220ENST00000611869 HELZ2Q9BYK8 2649 aaKnown RBP9.45□□□□□ -0.9
TCF3-220ENST00000611869 BEAN1Q3B7T3 259 aa9.44□□□□□ -0.9
TCF3-220ENST00000611869 RMI2Q96E14 147 aa9.44□□□□□ -0.9
TCF3-220ENST00000611869 C16orf95Q9H693 158 aa9.44□□□□□ -0.9
TCF3-220ENST00000611869 Q9UF83 564 aa9.44□□□□□ -0.9
TCF3-220ENST00000611869 TEX49A0A1B0GTD5 131 aa9.44□□□□□ -0.9
TCF3-220ENST00000611869 HAMPP81172 84 aa9.44□□□□□ -0.9
TCF3-220ENST00000611869 RPL18AQ02543 176 aaKnown RBP9.44□□□□□ -0.9
TCF3-220ENST00000611869 C11orf45Q8TAV5 145 aa9.43□□□□□ -0.9
TCF3-220ENST00000611869 LINC00526Q96FQ7 95 aa9.43□□□□□ -0.9
TCF3-220ENST00000611869 USP24Q9UPU5 2620 aa9.43□□□□□ -0.9
TCF3-220ENST00000611869 COX6A2Q02221 97 aa9.42□□□□□ -0.9
TCF3-220ENST00000611869 AMELXQ99217 191 aa9.42□□□□□ -0.9
TCF3-220ENST00000611869 UBL5Q9BZL1 73 aa9.42□□□□□ -0.9
TCF3-220ENST00000611869 LINC00959A0A1B0GUT2 108 aa9.42□□□□□ -0.9
TCF3-220ENST00000611869 C11orf72Q8NBR9 251 aa9.42□□□□□ -0.9
TCF3-220ENST00000611869 TMEM126AQ9H061 195 aa9.42□□□□□ -0.9
TCF3-220ENST00000611869 LINC01546A6NGU7 62 aa9.42□□□□□ -0.9
TCF3-220ENST00000611869 IBA57-AS1B1ANH7 110 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 IGHV4-30-4P0DP06 118 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 DSCR8Q96T75 97 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 USP34Q70CQ2 3546 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 IGLV4-60A0A075B6I1 120 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 TRBV30A0A0K0K1B3 111 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 FSHBP01225 129 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 UFSP1Q6NVU6 142 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 SPANXDQ9BXN6 97 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 DMXL1Q9Y485 3027 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 LOC400499M0QZD8 3231 aa9.41□□□□□ -0.9
TCF3-220ENST00000611869 KIR2DL5BQ8NHK3 375 aa9.4□□□□□ -0.9
TCF3-220ENST00000611869 ATRQ13535 2644 aa9.4□□□□□ -0.9
TCF3-220ENST00000611869 DEFB131BA0A096LNP1 70 aa9.4□□□□□ -0.9
TCF3-220ENST00000611869 SMIM1B2RUZ4 78 aa9.4□□□□□ -0.91
TCF3-220ENST00000611869 TIMM17BO60830 172 aa9.4□□□□□ -0.91
TCF3-220ENST00000611869 DEFB105AQ8NG35 78 aa9.4□□□□□ -0.91
TCF3-220ENST00000611869 F8WEM9 126 aa9.39□□□□□ -0.91
TCF3-220ENST00000611869 FHL2Q14192 279 aa9.39□□□□□ -0.91
TCF3-220ENST00000611869 ADAMTSL4-AS1Q5T5F5 129 aa9.39□□□□□ -0.91
TCF3-220ENST00000611869 CLUHP3Q96NS8 147 aa9.39□□□□□ -0.91
TCF3-220ENST00000611869 IGSF10Q6WRI0 2623 aa9.39□□□□□ -0.91
TCF3-220ENST00000611869 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
TCF3-220ENST00000611869 PRB2P02812 416 aaPredicted RBP9.38□□□□□ -0.91
TCF3-220ENST00000611869 SHISA2Q6UWI4 295 aa9.37□□□□□ -0.91
TCF3-220ENST00000611869 A0A096LNT2 108 aa9.37□□□□□ -0.91
TCF3-220ENST00000611869 ACYP1P07311 99 aa9.36□□□□□ -0.91
TCF3-220ENST00000611869 CD164L2Q6UWJ8 174 aa9.36□□□□□ -0.91
TCF3-220ENST00000611869 FLNCQ14315 2725 aa9.36□□□□□ -0.91
TCF3-220ENST00000611869 SLPIP03973 132 aa9.36□□□□□ -0.91
TCF3-220ENST00000611869 FHL3Q13643 280 aa9.36□□□□□ -0.91
TCF3-220ENST00000611869 KPRPQ5T749 579 aaPredicted RBP9.36□□□□□ -0.91
TCF3-220ENST00000611869 IGKV3D-7A0A0C4DH55 119 aa9.36□□□□□ -0.91
TCF3-220ENST00000611869 C14orf132Q9NPU4 83 aa9.36□□□□□ -0.91
TCF3-220ENST00000611869 MT-ATP8P03928 68 aa9.36□□□□□ -0.91
TCF3-220ENST00000611869 KALRNO60229 2985 aa9.35□□□□□ -0.91
TCF3-220ENST00000611869 RETNQ9HD89 108 aa9.35□□□□□ -0.91
TCF3-220ENST00000611869 CFAP47Q6ZTR5 3102 aa9.35□□□□□ -0.91
TCF3-220ENST00000611869 COL12A1Q99715 3063 aa9.35□□□□□ -0.91
TCF3-220ENST00000611869 ZZEF1O43149 2961 aa9.34□□□□□ -0.91
TCF3-220ENST00000611869 C9orf153Q5TBE3 101 aa9.34□□□□□ -0.91
TCF3-220ENST00000611869 LELP1Q5T871 98 aa9.34□□□□□ -0.91
TCF3-220ENST00000611869 DIRC1Q969H9 104 aa9.34□□□□□ -0.91
TCF3-220ENST00000611869 CSDC2Q9Y534 153 aaKnown RBP9.33□□□□□ -0.92
TCF3-220ENST00000611869 ETDCA0A1B0GVM5 59 aa9.33□□□□□ -0.92
TCF3-220ENST00000611869 LST1O00453 97 aa9.32□□□□□ -0.92
TCF3-220ENST00000611869 UBE2BP63146 152 aa9.32□□□□□ -0.92
TCF3-220ENST00000611869 NTM-AS1Q6ZSK4 140 aa9.32□□□□□ -0.92
TCF3-220ENST00000611869 MGAM2Q2M2H8 2515 aa9.32□□□□□ -0.92
TCF3-220ENST00000611869 C6orf99Q4VX62 202 aa9.32□□□□□ -0.92
TCF3-220ENST00000611869 TRACP01848 142 aa9.3□□□□□ -0.92
TCF3-220ENST00000611869 FAM236AA0A1B0GUQ0 79 aa9.3□□□□□ -0.92
TCF3-220ENST00000611869 FAM236BA0A1B0GV22 79 aa9.3□□□□□ -0.92
TCF3-220ENST00000611869 LRBAP50851 2863 aa9.3□□□□□ -0.92
TCF3-220ENST00000611869 A0A087WZ39 114 aa9.3□□□□□ -0.92
TCF3-220ENST00000611869 B5MCH6 92 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms