RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 K7EQD1 137 aa7.57□□□□□ -1.2
CTCFL-216ENST00000608263 LINC00315P59091 139 aa7.57□□□□□ -1.2
CTCFL-216ENST00000608263 HILS1P60008 231 aa7.57□□□□□ -1.2
CTCFL-216ENST00000608263 C9orf153Q5TBE3 101 aa7.57□□□□□ -1.2
CTCFL-216ENST00000608263 Q6ZSN1 163 aa7.57□□□□□ -1.2
CTCFL-216ENST00000608263 ITPR2Q14571 2701 aa7.57□□□□□ -1.2
CTCFL-216ENST00000608263 FAM236AA0A1B0GUQ0 79 aa7.56□□□□□ -1.2
CTCFL-216ENST00000608263 FAM236BA0A1B0GV22 79 aa7.56□□□□□ -1.2
CTCFL-216ENST00000608263 TMEM263Q8WUH6 116 aaKnown RBP7.56□□□□□ -1.2
CTCFL-216ENST00000608263 DEFB114Q30KQ6 69 aa7.56□□□□□ -1.2
CTCFL-216ENST00000608263 IGKV3D-7A0A0C4DH55 119 aa7.56□□□□□ -1.2
CTCFL-216ENST00000608263 GYPEP15421 78 aa7.56□□□□□ -1.2
CTCFL-216ENST00000608263 UBE2D3P61077 147 aa7.56□□□□□ -1.2
CTCFL-216ENST00000608263 UBE2D2P62837 147 aa7.56□□□□□ -1.2
CTCFL-216ENST00000608263 LOC100131303A0A0U1RQF7 123 aa7.55□□□□□ -1.2
CTCFL-216ENST00000608263 SS18Q15532 418 aa7.55□□□□□ -1.2
CTCFL-216ENST00000608263 LAMTOR3Q9UHA4 124 aa7.55□□□□□ -1.2
CTCFL-216ENST00000608263 ZNF575Q86XF7 245 aa7.55□□□□□ -1.2
CTCFL-216ENST00000608263 SPART-AS1P0CW21 52 aa7.54□□□□□ -1.2
CTCFL-216ENST00000608263 LINC00308Q8TCZ7 52 aa7.54□□□□□ -1.2
CTCFL-216ENST00000608263 DNAJC30Q96LL9 226 aa7.54□□□□□ -1.2
CTCFL-216ENST00000608263 UBE2D4Q9Y2X8 147 aa7.54□□□□□ -1.2
CTCFL-216ENST00000608263 ODF3Q96PU9 254 aa7.54□□□□□ -1.2
CTCFL-216ENST00000608263 PRO0461Q9UI25 63 aa7.54□□□□□ -1.2
CTCFL-216ENST00000608263 LINC01546A6NGU7 62 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 LECT2O14960 151 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 NDUFV3P56181 108 aaKnown RBP7.53□□□□□ -1.2
CTCFL-216ENST00000608263 RPL32P62910 135 aaKnown RBP7.53□□□□□ -1.2
CTCFL-216ENST00000608263 HERV-K104P63124 156 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 RBMY1FQ15415 496 aaKnown RBP7.53□□□□□ -1.2
CTCFL-216ENST00000608263 SMG1Q96Q15 3661 aaKnown RBP7.53□□□□□ -1.2
CTCFL-216ENST00000608263 ITPR1Q14643 2758 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 TRAV13-2A0A0B4J235 113 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 H3BT86 120 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 CDIP1Q9H305 208 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 IGKV2D-24A0A075B6R9 120 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 INAFM2P0DMQ5 153 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 LINC00694P0DN24 101 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 COX6A2Q02221 97 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 COX7B2Q8TF08 81 aa7.53□□□□□ -1.2
CTCFL-216ENST00000608263 DAZ2Q13117 558 aaKnown RBP7.52□□□□□ -1.21
CTCFL-216ENST00000608263 DAZ4Q86SG3 579 aaKnown RBP7.52□□□□□ -1.21
CTCFL-216ENST00000608263 DAZ3Q9NR90 486 aaKnown RBP7.52□□□□□ -1.21
CTCFL-216ENST00000608263 TRBV30A0A0K0K1B3 111 aa7.52□□□□□ -1.21
CTCFL-216ENST00000608263 H7C423 109 aa7.52□□□□□ -1.21
CTCFL-216ENST00000608263 SLPIP03973 132 aa7.52□□□□□ -1.21
CTCFL-216ENST00000608263 MRPS36P82909 103 aaKnown RBP7.51□□□□□ -1.21
CTCFL-216ENST00000608263 TMEM89A2RUT3 159 aa7.51□□□□□ -1.21
CTCFL-216ENST00000608263 C14orf132Q9NPU4 83 aa7.51□□□□□ -1.21
CTCFL-216ENST00000608263 SHISA2Q6UWI4 295 aa7.51□□□□□ -1.21
CTCFL-216ENST00000608263 PYGO1Q9Y3Y4 419 aa7.51□□□□□ -1.21
CTCFL-216ENST00000608263 CCDC179H3BU77 68 aa7.5□□□□□ -1.21
CTCFL-216ENST00000608263 ZNF561-AS1K7EIQ3 104 aa7.5□□□□□ -1.21
CTCFL-216ENST00000608263 FAM222AQ5U5X8 452 aa7.5□□□□□ -1.21
CTCFL-216ENST00000608263 CSMD1Q96PZ7 3565 aa7.5□□□□□ -1.21
CTCFL-216ENST00000608263 CHCHD7Q9BUK0 85 aa7.49□□□□□ -1.21
CTCFL-216ENST00000608263 COX7A2LO14548 114 aa7.49□□□□□ -1.21
CTCFL-216ENST00000608263 LINC00242Q5T6M2 205 aa7.49□□□□□ -1.21
CTCFL-216ENST00000608263 TRAV25A0A0B4J276 109 aa7.48□□□□□ -1.21
CTCFL-216ENST00000608263 HAMPP81172 84 aa7.48□□□□□ -1.21
CTCFL-216ENST00000608263 ODF3L2Q3SX64 289 aa7.48□□□□□ -1.21
CTCFL-216ENST00000608263 C16orf74Q96GX8 76 aa7.48□□□□□ -1.21
CTCFL-216ENST00000608263 NSD1Q96L73 2696 aaPredicted RBP7.48□□□□□ -1.21
CTCFL-216ENST00000608263 LST1O00453 97 aa7.48□□□□□ -1.21
CTCFL-216ENST00000608263 NDUFA1O15239 70 aa7.48□□□□□ -1.21
CTCFL-216ENST00000608263 RNF152Q8N8N0 203 aa7.48□□□□□ -1.21
CTCFL-216ENST00000608263 FAM19A4Q96LR4 140 aa7.48□□□□□ -1.21
CTCFL-216ENST00000608263 LINC00526Q96FQ7 95 aa7.47□□□□□ -1.21
CTCFL-216ENST00000608263 SDIM1Q6ZPB5 146 aa7.46□□□□□ -1.21
CTCFL-216ENST00000608263 KLK12Q9UKR0 248 aa7.46□□□□□ -1.21
CTCFL-216ENST00000608263 AMELXQ99217 191 aa7.46□□□□□ -1.22
CTCFL-216ENST00000608263 TRBV10-1A0A0K0K1A3 114 aa7.46□□□□□ -1.22
CTCFL-216ENST00000608263 CCL18P55774 89 aa7.46□□□□□ -1.22
CTCFL-216ENST00000608263 TIRAPP58753 221 aa7.46□□□□□ -1.22
CTCFL-216ENST00000608263 MRPL23Q16540 153 aaKnown RBP7.46□□□□□ -1.22
CTCFL-216ENST00000608263 SPANXDQ9BXN6 97 aa7.46□□□□□ -1.22
CTCFL-216ENST00000608263 SPANXCQ9NY87 97 aa7.46□□□□□ -1.22
CTCFL-216ENST00000608263 C11orf45Q8TAV5 145 aa7.45□□□□□ -1.22
CTCFL-216ENST00000608263 NCR3O14931 201 aa7.45□□□□□ -1.22
CTCFL-216ENST00000608263 FHL3Q13643 280 aa7.45□□□□□ -1.22
CTCFL-216ENST00000608263 C1orf158Q8N1D5 194 aa7.45□□□□□ -1.22
CTCFL-216ENST00000608263 CITED1Q99966 193 aa7.45□□□□□ -1.22
CTCFL-216ENST00000608263 OVOL2Q9BRP0 275 aa7.45□□□□□ -1.22
CTCFL-216ENST00000608263 UTP20O75691 2785 aaKnown RBP7.44□□□□□ -1.22
CTCFL-216ENST00000608263 A0A1B0GX51 115 aa7.44□□□□□ -1.22
CTCFL-216ENST00000608263 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
CTCFL-216ENST00000608263 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
CTCFL-216ENST00000608263 ORMDL1Q9P0S3 153 aa7.44□□□□□ -1.22
CTCFL-216ENST00000608263 C1orf43Q9BWL3 253 aa7.43□□□□□ -1.22
CTCFL-216ENST00000608263 RETNQ9HD89 108 aa7.43□□□□□ -1.22
CTCFL-216ENST00000608263 ZANQ9Y493 2812 aa7.43□□□□□ -1.22
CTCFL-216ENST00000608263 Q8N2B8 174 aa7.43□□□□□ -1.22
CTCFL-216ENST00000608263 CDC42SE2Q9NRR3 84 aa7.43□□□□□ -1.22
CTCFL-216ENST00000608263 LINC00269Q8N2A0 174 aa7.43□□□□□ -1.22
CTCFL-216ENST00000608263 IGLV4-60A0A075B6I1 120 aa7.42□□□□□ -1.22
CTCFL-216ENST00000608263 ACYP1P07311 99 aa7.42□□□□□ -1.22
CTCFL-216ENST00000608263 NBEAL2Q6ZNJ1 2754 aa7.42□□□□□ -1.22
CTCFL-216ENST00000608263 PRR3P79522 188 aaKnown RBP7.42□□□□□ -1.22
CTCFL-216ENST00000608263 H0YGX0 51 aa7.41□□□□□ -1.22
CTCFL-216ENST00000608263 PRO0255Q9UI72 69 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms