RNA–Protein interactions for RNA: ENST00000601869.1

STRN4-222, Transcript of striatin 4, human

Gene STRN4, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-222	ENST00000601869	MIR7-3HG	Q8N6C7	128 aa		13.89	□□□□□ -0.19
STRN4-222	ENST00000601869	COX7B2	Q8TF08	81 aa		13.89	□□□□□ -0.19
STRN4-222	ENST00000601869	UTP20	O75691	2785 aa	Known RBP	13.89	□□□□□ -0.19
STRN4-222	ENST00000601869	USP17L23	D6RBM5	183 aa		13.88	□□□□□ -0.19
STRN4-222	ENST00000601869		K7EQD1	137 aa		13.88	□□□□□ -0.19
STRN4-222	ENST00000601869	PRB1	P04280	392 aa		13.88	□□□□□ -0.19
STRN4-222	ENST00000601869	C10orf99	Q6UWK7	81 aa		13.88	□□□□□ -0.19
STRN4-222	ENST00000601869	IGKV3D-7	A0A0C4DH55	119 aa		13.88	□□□□□ -0.19
STRN4-222	ENST00000601869	CELSR2	Q9HCU4	2923 aa		13.88	□□□□□ -0.19
STRN4-222	ENST00000601869	ZFYVE26	Q68DK2	2539 aa		13.87	□□□□□ -0.19
STRN4-222	ENST00000601869	CRYBG3	Q68DQ2	2970 aa		13.87	□□□□□ -0.19
STRN4-222	ENST00000601869	MAP1A	P78559	2803 aa	Predicted RBP	13.87	□□□□□ -0.19
STRN4-222	ENST00000601869	NDUFC2-KCTD14	E9PQ53	114 aa		13.87	□□□□□ -0.19
STRN4-222	ENST00000601869	PRM2	P04554	102 aa		13.87	□□□□□ -0.19
STRN4-222	ENST00000601869	IL17D	Q8TAD2	202 aa		13.87	□□□□□ -0.19
STRN4-222	ENST00000601869	NTM-AS1	Q6ZSK4	140 aa		13.86	□□□□□ -0.19
STRN4-222	ENST00000601869	LINC01561	Q8N1V8	128 aa		13.86	□□□□□ -0.19
STRN4-222	ENST00000601869	IBA57-AS1	B1ANH7	110 aa		13.85	□□□□□ -0.19
STRN4-222	ENST00000601869		Q96MF0	132 aa		13.85	□□□□□ -0.19
STRN4-222	ENST00000601869	CYSTM1	Q9H1C7	97 aa		13.84	□□□□□ -0.19
STRN4-222	ENST00000601869	MAP6D1	Q9H9H5	199 aa		13.84	□□□□□ -0.19
STRN4-222	ENST00000601869	UBE2L6	O14933	153 aa		13.84	□□□□□ -0.19
STRN4-222	ENST00000601869	BBC3	Q96PG8	261 aa	Predicted RBP	13.84	□□□□□ -0.19
STRN4-222	ENST00000601869	IGHV4-59	P01825	116 aa		13.83	□□□□□ -0.2
STRN4-222	ENST00000601869	TMEM243	Q9BU79	118 aa		13.83	□□□□□ -0.2
STRN4-222	ENST00000601869	ORMDL1	Q9P0S3	153 aa		13.83	□□□□□ -0.2
STRN4-222	ENST00000601869	ZNF462	Q96JM2	2506 aa		13.83	□□□□□ -0.2
STRN4-222	ENST00000601869		B4DSR2	109 aa		13.83	□□□□□ -0.2
STRN4-222	ENST00000601869	LECT2	O14960	151 aa		13.83	□□□□□ -0.2
STRN4-222	ENST00000601869	CCK	P06307	115 aa		13.83	□□□□□ -0.2
STRN4-222	ENST00000601869	C9orf129	Q5T035	196 aa	Known RBP	13.83	□□□□□ -0.2
STRN4-222	ENST00000601869	CCL18	P55774	89 aa		13.82	□□□□□ -0.2
STRN4-222	ENST00000601869	NDUFC2	O95298	119 aa		13.82	□□□□□ -0.2
STRN4-222	ENST00000601869	LY6G6D	O95868	133 aa		13.82	□□□□□ -0.2
STRN4-222	ENST00000601869	DSCR9	P59020	149 aa		13.82	□□□□□ -0.2
STRN4-222	ENST00000601869	LINC00158	P58513	81 aa		13.81	□□□□□ -0.2
STRN4-222	ENST00000601869	JMJD7-PLA2G4B	H0Y9G9	81 aa		13.8	□□□□□ -0.2
STRN4-222	ENST00000601869	AVP	P01185	164 aa		13.8	□□□□□ -0.2
STRN4-222	ENST00000601869		A0A087WVE0	104 aa		13.8	□□□□□ -0.2
STRN4-222	ENST00000601869	LINC00167	Q96N53	147 aa		13.8	□□□□□ -0.2
STRN4-222	ENST00000601869	CSMD2	Q7Z408	3487 aa		13.8	□□□□□ -0.2
STRN4-222	ENST00000601869	TRGV1	A0A0A0MS02	117 aa		13.79	□□□□□ -0.2
STRN4-222	ENST00000601869	DEFB112	Q30KQ8	113 aa		13.79	□□□□□ -0.2
STRN4-222	ENST00000601869	KIR2DL5B	Q8NHK3	375 aa		13.79	□□□□□ -0.2
STRN4-222	ENST00000601869	TRBV10-3	A0A0K0K1G6	114 aa		13.78	□□□□□ -0.2
STRN4-222	ENST00000601869	NCR3	O14931	201 aa		13.78	□□□□□ -0.2
STRN4-222	ENST00000601869	FAM208B	Q5VWN6	2430 aa		13.77	□□□□□ -0.2
STRN4-222	ENST00000601869	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.77	□□□□□ -0.2	2e-10	■■■■□ 23.9
STRN4-222	ENST00000601869	TRBV6-4	A0A1B0GX49	114 aa		13.77	□□□□□ -0.21
STRN4-222	ENST00000601869	ZNF843	Q8N446	348 aa		13.77	□□□□□ -0.21
STRN4-222	ENST00000601869	SORL1	Q92673	2214 aa		13.77	□□□□□ -0.21
STRN4-222	ENST00000601869	LRRK2	Q5S007	2527 aa		13.76	□□□□□ -0.21
STRN4-222	ENST00000601869	TRAV25	A0A0B4J276	109 aa		13.76	□□□□□ -0.21
STRN4-222	ENST00000601869	SLURP1	P55000	103 aa		13.76	□□□□□ -0.21
STRN4-222	ENST00000601869	UBR5	O95071	2799 aa	Predicted RBP	13.76	□□□□□ -0.21
STRN4-222	ENST00000601869	LYPD5	Q6UWN5	251 aa		13.76	□□□□□ -0.21
STRN4-222	ENST00000601869	FBN2	P35556	2912 aa		13.76	□□□□□ -0.21
STRN4-222	ENST00000601869	DSCR8	Q96T75	97 aa		13.75	□□□□□ -0.21
STRN4-222	ENST00000601869	TOMM7	Q9P0U1	55 aa		13.75	□□□□□ -0.21
STRN4-222	ENST00000601869	BCE1	O60756	84 aa		13.75	□□□□□ -0.21
STRN4-222	ENST00000601869	SS18	Q15532	418 aa		13.75	□□□□□ -0.21
STRN4-222	ENST00000601869	LINC01356	Q8N9X3	169 aa		13.75	□□□□□ -0.21
STRN4-222	ENST00000601869	DYNLRB2	Q8TF09	96 aa		13.75	□□□□□ -0.21
STRN4-222	ENST00000601869	ZNF702P	Q9H963	129 aa		13.75	□□□□□ -0.21
STRN4-222	ENST00000601869		A0A096LNT2	108 aa		13.74	□□□□□ -0.21
STRN4-222	ENST00000601869	ANKRD17	O75179	2603 aa	Known RBP	13.74	□□□□□ -0.21
STRN4-222	ENST00000601869	PAX4	O43316	350 aa		13.74	□□□□□ -0.21
STRN4-222	ENST00000601869		A0A087WZ39	114 aa		13.72	□□□□□ -0.21
STRN4-222	ENST00000601869	IGHV3OR16-9	A0A0B4J2B5	98 aa		13.72	□□□□□ -0.21
STRN4-222	ENST00000601869	OXT	P01178	125 aa		13.72	□□□□□ -0.21
STRN4-222	ENST00000601869	GHRH	P01286	108 aa		13.72	□□□□□ -0.21
STRN4-222	ENST00000601869		J3QLI3	93 aa		13.72	□□□□□ -0.21
STRN4-222	ENST00000601869	C1orf158	Q8N1D5	194 aa		13.72	□□□□□ -0.21
STRN4-222	ENST00000601869	CSPG4	Q6UVK1	2322 aa		13.72	□□□□□ -0.21
STRN4-222	ENST00000601869	POLQ	O75417	2590 aa		13.72	□□□□□ -0.21
STRN4-222	ENST00000601869	TMEM256-PLSCR3	K7ERE1	68 aa		13.71	□□□□□ -0.21
STRN4-222	ENST00000601869	XCL2	Q9UBD3	114 aa		13.71	□□□□□ -0.21
STRN4-222	ENST00000601869	USP9Y	O00507	2555 aa	Predicted RBP	13.71	□□□□□ -0.21
STRN4-222	ENST00000601869		A0A1W2PRX2	142 aa		13.71	□□□□□ -0.22
STRN4-222	ENST00000601869	MAPK1IP1L	Q8NDC0	245 aa		13.71	□□□□□ -0.22
STRN4-222	ENST00000601869	CENPE	Q02224	2701 aa		13.71	□□□□□ -0.22
STRN4-222	ENST00000601869	FHL2	Q14192	279 aa		13.7	□□□□□ -0.22
STRN4-222	ENST00000601869	DEFB114	Q30KQ6	69 aa		13.7	□□□□□ -0.22
STRN4-222	ENST00000601869		Q5XG85	94 aa		13.7	□□□□□ -0.22
STRN4-222	ENST00000601869		Q6ZTI0	123 aa		13.7	□□□□□ -0.22
STRN4-222	ENST00000601869	STH	Q8IWL8	128 aa		13.69	□□□□□ -0.22
STRN4-222	ENST00000601869	C11orf44	Q8N8P7	122 aa		13.69	□□□□□ -0.22
STRN4-222	ENST00000601869	TMEM86B	Q8N661	226 aa		13.68	□□□□□ -0.22
STRN4-222	ENST00000601869	C4orf3	Q8WVX3	66 aa		13.68	□□□□□ -0.22
STRN4-222	ENST00000601869	SLPI	P03973	132 aa		13.68	□□□□□ -0.22
STRN4-222	ENST00000601869	DEFB136	Q30KP8	78 aa		13.67	□□□□□ -0.22
STRN4-222	ENST00000601869	UBL5	Q9BZL1	73 aa		13.67	□□□□□ -0.22
STRN4-222	ENST00000601869	EPG5	Q9HCE0	2579 aa		13.67	□□□□□ -0.22
STRN4-222	ENST00000601869		Q8N814	137 aa		13.67	□□□□□ -0.22
STRN4-222	ENST00000601869	PFN2	P35080	140 aa		13.66	□□□□□ -0.22
STRN4-222	ENST00000601869	KRTAP10-9	P60411	292 aa		13.66	□□□□□ -0.22
STRN4-222	ENST00000601869	ZAN	Q9Y493	2812 aa		13.66	□□□□□ -0.22
STRN4-222	ENST00000601869	PTPN13	Q12923	2485 aa		13.66	□□□□□ -0.22
STRN4-222	ENST00000601869	ODF3L2	Q3SX64	289 aa		13.64	□□□□□ -0.23
STRN4-222	ENST00000601869		Q6YL49	198 aa		13.64	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms