RNA–Protein interactions for RNA: ENST00000599538.5

VRK3-217, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 2,126 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-217ENST00000599538 IGLV5-39A0A0G2JS06 123 aa10.07□□□□□ -0.8
VRK3-217ENST00000599538 F5H768 121 aa10.07□□□□□ -0.8
VRK3-217ENST00000599538 PRIMA1Q86XR5 153 aa10.07□□□□□ -0.8
VRK3-217ENST00000599538 RNF183Q96D59 192 aa10.07□□□□□ -0.8
VRK3-217ENST00000599538 H7C423 109 aa10.07□□□□□ -0.8
VRK3-217ENST00000599538 PAX4O43316 350 aa10.07□□□□□ -0.8
VRK3-217ENST00000599538 TSPAN13O95857 204 aa10.07□□□□□ -0.8
VRK3-217ENST00000599538 ANK2Q01484 3957 aa10.07□□□□□ -0.8
VRK3-217ENST00000599538 CMYA5Q8N3K9 4069 aa10.07□□□□□ -0.8
VRK3-217ENST00000599538 TMEM238C9JI98 176 aa10.06□□□□□ -0.8
VRK3-217ENST00000599538 DAD1P61803 113 aa10.06□□□□□ -0.8
VRK3-217ENST00000599538 MIFP14174 115 aa10.06□□□□□ -0.8
VRK3-217ENST00000599538 NPC2P61916 151 aa10.06□□□□□ -0.8
VRK3-217ENST00000599538 C3orf56Q8N813 242 aa10.06□□□□□ -0.8
VRK3-217ENST00000599538 ZNF625Q96I27 306 aaPredicted RBP10.06□□□□□ -0.8
VRK3-217ENST00000599538 COL6A5A8TX70 2615 aa10.05□□□□□ -0.8
VRK3-217ENST00000599538 SMAGPQ0VAQ4 97 aa10.05□□□□□ -0.8
VRK3-217ENST00000599538 DAND5Q8N907 189 aa10.05□□□□□ -0.8
VRK3-217ENST00000599538 PRSS2P07478 247 aa10.04□□□□□ -0.8
VRK3-217ENST00000599538 RETNQ9HD89 108 aa10.04□□□□□ -0.8
VRK3-217ENST00000599538 NDUFA1O15239 70 aa10.04□□□□□ -0.8
VRK3-217ENST00000599538 Q9H8V8 135 aa10.04□□□□□ -0.8
VRK3-217ENST00000599538 TRAV26-1A0A087WT03 109 aa10.03□□□□□ -0.8
VRK3-217ENST00000599538 H3BMG7 143 aa10.03□□□□□ -0.8
VRK3-217ENST00000599538 HTN3P15516 51 aa10.03□□□□□ -0.8
VRK3-217ENST00000599538 Q8N3U1 123 aa10.03□□□□□ -0.8
VRK3-217ENST00000599538 A0A0U1RRA0 63 aa10.02□□□□□ -0.81
VRK3-217ENST00000599538 TMEM262E9PQX1 116 aa10.02□□□□□ -0.81
VRK3-217ENST00000599538 MTURNQ8N3F0 131 aa10.02□□□□□ -0.81
VRK3-217ENST00000599538 TENM3Q9P273 2699 aa10.02□□□□□ -0.81
VRK3-217ENST00000599538 NOTCH1P46531 2555 aa10.01□□□□□ -0.81
VRK3-217ENST00000599538 ATP5G1P05496 136 aa10.01□□□□□ -0.81
VRK3-217ENST00000599538 SPART-AS1P0CW21 52 aa10.01□□□□□ -0.81
VRK3-217ENST00000599538 RBX1P62877 108 aa10.01□□□□□ -0.81
VRK3-217ENST00000599538 RPL24P83731 157 aaKnown RBP10.01□□□□□ -0.81
VRK3-217ENST00000599538 SPANXDQ9BXN6 97 aa10.01□□□□□ -0.81
VRK3-217ENST00000599538 SPANXCQ9NY87 97 aa10.01□□□□□ -0.81
VRK3-217ENST00000599538 PRO1854Q9UHT4 67 aa10.01□□□□□ -0.81
VRK3-217ENST00000599538 MIAQ16674 131 aa10.01□□□□□ -0.81
VRK3-217ENST00000599538 CLPSL2Q6UWE3 100 aa10.01□□□□□ -0.81
VRK3-217ENST00000599538 IGHV3OR16-9A0A0B4J2B5 98 aa10□□□□□ -0.81
VRK3-217ENST00000599538 LOC107984156A0A0G2JMH3 177 aa10□□□□□ -0.81
VRK3-217ENST00000599538 ARL17AQ8IVW1 177 aa10□□□□□ -0.81
VRK3-217ENST00000599538 EGFEM1PQ0D2K5 195 aa10□□□□□ -0.81
VRK3-217ENST00000599538 LINC00959A0A1B0GUT2 108 aa9.99□□□□□ -0.81
VRK3-217ENST00000599538 G3V4G9 280 aa9.99□□□□□ -0.81
VRK3-217ENST00000599538 H7C2G1 150 aa9.99□□□□□ -0.81
VRK3-217ENST00000599538 IGHV3-33P01772 117 aa9.99□□□□□ -0.81
VRK3-217ENST00000599538 SHISA2Q6UWI4 295 aa9.99□□□□□ -0.81
VRK3-217ENST00000599538 C5orf38Q86SI9 138 aa9.98□□□□□ -0.81
VRK3-217ENST00000599538 A0A0B4J2C4 111 aa9.98□□□□□ -0.81
VRK3-217ENST00000599538 OCIAD2Q56VL3 154 aa9.98□□□□□ -0.81
VRK3-217ENST00000599538 A0A1B0GUV1 79 aa9.97□□□□□ -0.81
VRK3-217ENST00000599538 TIMM17BO60830 172 aa9.97□□□□□ -0.81
VRK3-217ENST00000599538 WFDC2Q14508 124 aa9.97□□□□□ -0.81
VRK3-217ENST00000599538 TOMM7Q9P0U1 55 aa9.97□□□□□ -0.81
VRK3-217ENST00000599538 XCL1P47992 114 aa9.96□□□□□ -0.82
VRK3-217ENST00000599538 SOSTDC1Q6X4U4 206 aa9.96□□□□□ -0.82
VRK3-217ENST00000599538 CBY1Q9Y3M2 126 aa9.96□□□□□ -0.82
VRK3-217ENST00000599538 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.95□□□□□ -0.82
VRK3-217ENST00000599538 PSMB2P49721 201 aa9.95□□□□□ -0.82
VRK3-217ENST00000599538 COX7B2Q8TF08 81 aa9.95□□□□□ -0.82
VRK3-217ENST00000599538 PRO0461Q9UI25 63 aa9.95□□□□□ -0.82
VRK3-217ENST00000599538 A0A087WZ39 114 aa9.95□□□□□ -0.82
VRK3-217ENST00000599538 TCL1BO95988 128 aa9.94□□□□□ -0.82
VRK3-217ENST00000599538 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
VRK3-217ENST00000599538 LINC00269Q8N2A0 174 aa9.94□□□□□ -0.82
VRK3-217ENST00000599538 LINC00308Q8TCZ7 52 aa9.94□□□□□ -0.82
VRK3-217ENST00000599538 ERG28Q9UKR5 140 aa9.94□□□□□ -0.82
VRK3-217ENST00000599538 DNAH3Q8TD57 4116 aa9.93□□□□□ -0.82
VRK3-217ENST00000599538 NBEAL1Q6ZS30 2694 aa9.93□□□□□ -0.82
VRK3-217ENST00000599538 CIRBPQ14011 172 aaKnown RBP9.93□□□□□ -0.82
VRK3-217ENST00000599538 MRPL23Q16540 153 aaKnown RBP9.93□□□□□ -0.82
VRK3-217ENST00000599538 PRB2P02812 416 aaPredicted RBP9.92□□□□□ -0.82
VRK3-217ENST00000599538 ANGP03950 147 aaKnown RBP9.92□□□□□ -0.82
VRK3-217ENST00000599538 IFITM1P13164 125 aa9.92□□□□□ -0.82
VRK3-217ENST00000599538 SH2D6Q7Z4S9 175 aa9.92□□□□□ -0.82
VRK3-217ENST00000599538 IGLV10-54A0A075B6I4 117 aa9.91□□□□□ -0.82
VRK3-217ENST00000599538 F8W1H4 67 aa9.91□□□□□ -0.82
VRK3-217ENST00000599538 SCGB1C2P0DMR2 95 aa9.91□□□□□ -0.82
VRK3-217ENST00000599538 SMCPP49901 116 aaPredicted RBP9.91□□□□□ -0.82
VRK3-217ENST00000599538 SS18Q15532 418 aa9.91□□□□□ -0.82
VRK3-217ENST00000599538 Q1RN00 199 aa9.91□□□□□ -0.82
VRK3-217ENST00000599538 RNF151Q2KHN1 245 aa9.91□□□□□ -0.82
VRK3-217ENST00000599538 ICOSQ9Y6W8 199 aa9.91□□□□□ -0.82
VRK3-217ENST00000599538 HERV-K104P63124 156 aa9.91□□□□□ -0.82
VRK3-217ENST00000599538 Q6ZTC4 211 aa9.91□□□□□ -0.82
VRK3-217ENST00000599538 C11orf68Q9H3H3 251 aaKnown RBP9.91□□□□□ -0.82
VRK3-217ENST00000599538 TEX48A0A1B0GUV7 120 aa9.9□□□□□ -0.82
VRK3-217ENST00000599538 TRIAP1O43715 76 aa9.89□□□□□ -0.83
VRK3-217ENST00000599538 ETDBQ3ZM63 59 aa9.89□□□□□ -0.83
VRK3-217ENST00000599538 REG3AQ06141 175 aa9.89□□□□□ -0.83
VRK3-217ENST00000599538 LELP1Q5T871 98 aa9.89□□□□□ -0.83
VRK3-217ENST00000599538 A0A0J9YWU9 116 aa9.88□□□□□ -0.83
VRK3-217ENST00000599538 MIR7-3HGQ8N6C7 128 aa9.88□□□□□ -0.83
VRK3-217ENST00000599538 CHCHD10Q8WYQ3 142 aaPredicted RBP9.88□□□□□ -0.83
VRK3-217ENST00000599538 RPL13AP40429 203 aaKnown RBP9.87□□□□□ -0.83
VRK3-217ENST00000599538 LYPD5Q6UWN5 251 aa9.87□□□□□ -0.83
VRK3-217ENST00000599538 C2orf82Q6UX34 121 aa9.87□□□□□ -0.83
VRK3-217ENST00000599538 K7ERU9 68 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.5 ms