RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 HIST1H4AP62805 103 aaKnown RBP12.72□□□□□ -0.37
SPC24-206ENST00000592540 ODF3L2Q3SX64 289 aa12.72□□□□□ -0.37
SPC24-206ENST00000592540 A0A096LNT2 108 aa12.72□□□□□ -0.37
SPC24-206ENST00000592540 KHDC1LQ5JSQ8 128 aa12.72□□□□□ -0.37
SPC24-206ENST00000592540 C9orf129Q5T035 196 aaKnown RBP12.72□□□□□ -0.37
SPC24-206ENST00000592540 STHQ8IWL8 128 aa12.72□□□□□ -0.37
SPC24-206ENST00000592540 CFAP161Q6P656 301 aa12.71□□□□□ -0.37
SPC24-206ENST00000592540 C2orf48Q96LS8 159 aa12.71□□□□□ -0.37
SPC24-206ENST00000592540 TOMM7Q9P0U1 55 aa12.71□□□□□ -0.38
SPC24-206ENST00000592540 USP9YO00507 2555 aaPredicted RBP12.71□□□□□ -0.38
SPC24-206ENST00000592540 FSHBP01225 129 aa12.7□□□□□ -0.38
SPC24-206ENST00000592540 C14orf132Q9NPU4 83 aa12.7□□□□□ -0.38
SPC24-206ENST00000592540 LINC00158P58513 81 aa12.69□□□□□ -0.38
SPC24-206ENST00000592540 H0YGX0 51 aa12.68□□□□□ -0.38
SPC24-206ENST00000592540 ATOX1O00244 68 aa12.68□□□□□ -0.38
SPC24-206ENST00000592540 CCL18P55774 89 aa12.68□□□□□ -0.38
SPC24-206ENST00000592540 KLK5Q9Y337 293 aaPredicted RBP12.68□□□□□ -0.38
SPC24-206ENST00000592540 C2CD3Q4AC94 2353 aa12.68□□□□□ -0.38
SPC24-206ENST00000592540 OBSCN-AS1Q96MR7 158 aa12.68□□□□□ -0.38
SPC24-206ENST00000592540 ANKRD17O75179 2603 aaKnown RBP12.67□□□□□ -0.38
SPC24-206ENST00000592540 CRYGAP11844 174 aa12.67□□□□□ -0.38
SPC24-206ENST00000592540 NOP10Q9NPE3 64 aaKnown RBP12.67□□□□□ -0.38
SPC24-206ENST00000592540 LRRC75A-AS1Q8N1F1 130 aa12.66□□□□□ -0.38
SPC24-206ENST00000592540 IGKV3OR2-268A0A0C4DH90 116 aa12.66□□□□□ -0.38
SPC24-206ENST00000592540 FLNCQ14315 2725 aa12.65□□□□□ -0.38
SPC24-206ENST00000592540 DOPEY1Q5JWR5 2465 aa12.65□□□□□ -0.38
SPC24-206ENST00000592540 UTP20O75691 2785 aaKnown RBP12.65□□□□□ -0.38
SPC24-206ENST00000592540 LOC100131303A0A0U1RQF7 123 aa12.65□□□□□ -0.39
SPC24-206ENST00000592540 LINC00846Q9NV44 126 aa12.65□□□□□ -0.39
SPC24-206ENST00000592540 IGKV3D-7A0A0C4DH55 119 aa12.64□□□□□ -0.39
SPC24-206ENST00000592540 LECT2O14960 151 aa12.64□□□□□ -0.39
SPC24-206ENST00000592540 RPL18AQ02543 176 aaKnown RBP12.64□□□□□ -0.39
SPC24-206ENST00000592540 Q6JHZ5 121 aa12.64□□□□□ -0.39
SPC24-206ENST00000592540 MYO9AB2RTY4 2548 aa12.64□□□□□ -0.39
SPC24-206ENST00000592540 IBA57-AS1B1ANH7 110 aa12.63□□□□□ -0.39
SPC24-206ENST00000592540 WNK1Q9H4A3 2382 aa12.63□□□□□ -0.39
SPC24-206ENST00000592540 IGHV3OR16-9A0A0B4J2B5 98 aa12.63□□□□□ -0.39
SPC24-206ENST00000592540 NOTCH3Q9UM47 2321 aa12.62□□□□□ -0.39
SPC24-206ENST00000592540 CHD6Q8TD26 2715 aa12.62□□□□□ -0.39
SPC24-206ENST00000592540 TRAV25A0A0B4J276 109 aa12.62□□□□□ -0.39
SPC24-206ENST00000592540 LOC107984640A0A0U1RRK4 108 aa12.62□□□□□ -0.39
SPC24-206ENST00000592540 CR1P17927 2039 aa12.62□□□□□ -0.39
SPC24-206ENST00000592540 USP9XQ93008 2570 aaPredicted RBP12.62□□□□□ -0.39
SPC24-206ENST00000592540 AKAP9Q99996 3911 aa12.62□□□□□ -0.39
SPC24-206ENST00000592540 IGLV4-60A0A075B6I1 120 aa12.62□□□□□ -0.39
SPC24-206ENST00000592540 PFN2P35080 140 aa12.62□□□□□ -0.39
SPC24-206ENST00000592540 NCR3O14931 201 aa12.61□□□□□ -0.39
SPC24-206ENST00000592540 CFAP46Q8IYW2 2715 aa12.61□□□□□ -0.39
SPC24-206ENST00000592540 hADV29S1A0JD25 119 aa12.61□□□□□ -0.39
SPC24-206ENST00000592540 TRGV2A0A075B6R0 118 aa12.6□□□□□ -0.39
SPC24-206ENST00000592540 A0A1B0GX51 115 aa12.6□□□□□ -0.39
SPC24-206ENST00000592540 PAX4O43316 350 aa12.6□□□□□ -0.39
SPC24-206ENST00000592540 IGHV4-31P0DP07 118 aa12.6□□□□□ -0.39
SPC24-206ENST00000592540 OR13C6PQ8NH95 151 aa12.6□□□□□ -0.39
SPC24-206ENST00000592540 A0A087WZ39 114 aa12.59□□□□□ -0.39
SPC24-206ENST00000592540 TRBV6-4A0A1B0GX49 114 aa12.59□□□□□ -0.39
SPC24-206ENST00000592540 PLAC8L1A1L4L8 177 aa12.59□□□□□ -0.39
SPC24-206ENST00000592540 J3KT08 172 aa12.59□□□□□ -0.39
SPC24-206ENST00000592540 SLPIP03973 132 aa12.59□□□□□ -0.39
SPC24-206ENST00000592540 CYSTM1Q9H1C7 97 aa12.58□□□□□ -0.4
SPC24-206ENST00000592540 CUBNO60494 3623 aa12.58□□□□□ -0.4
SPC24-206ENST00000592540 POLQO75417 2590 aa12.57□□□□□ -0.4
SPC24-206ENST00000592540 A0A087WVE0 104 aa12.57□□□□□ -0.4
SPC24-206ENST00000592540 TRBV6-8A0A0A6YYG3 113 aa12.57□□□□□ -0.4
SPC24-206ENST00000592540 GIG44P09565 113 aaPredicted RBP12.57□□□□□ -0.4
SPC24-206ENST00000592540 C16orf74Q96GX8 76 aa12.57□□□□□ -0.4
SPC24-206ENST00000592540 LY6G6DO95868 133 aa12.56□□□□□ -0.4
SPC24-206ENST00000592540 LINC01561Q8N1V8 128 aa12.56□□□□□ -0.4
SPC24-206ENST00000592540 TRGV4A0A0C4DH28 118 aa12.56□□□□□ -0.4
SPC24-206ENST00000592540 SS18Q15532 418 aa12.56□□□□□ -0.4
SPC24-206ENST00000592540 SERP2Q8N6R1 65 aa12.56□□□□□ -0.4
SPC24-206ENST00000592540 ORMDL1Q9P0S3 153 aa12.56□□□□□ -0.4
SPC24-206ENST00000592540 TEX15Q9BXT5 2789 aa12.56□□□□□ -0.4
SPC24-206ENST00000592540 NBPF19A0A087WUL8 3843 aa12.54□□□□□ -0.4
SPC24-206ENST00000592540 PKD1L2Q7Z442 2459 aa12.54□□□□□ -0.4
SPC24-206ENST00000592540 C11orf68Q9H3H3 251 aaKnown RBP12.54□□□□□ -0.4
SPC24-206ENST00000592540 A0A1W2PRX2 142 aa12.53□□□□□ -0.4
SPC24-206ENST00000592540 USP17L23D6RBM5 183 aa12.53□□□□□ -0.4
SPC24-206ENST00000592540 CCKP06307 115 aa12.53□□□□□ -0.4
SPC24-206ENST00000592540 RPS28P62857 69 aaKnown RBP12.53□□□□□ -0.4
SPC24-206ENST00000592540 C6orf226Q5I0X4 101 aa12.53□□□□□ -0.4
SPC24-206ENST00000592540 FBN2P35556 2912 aa12.53□□□□□ -0.4
SPC24-206ENST00000592540 C11orf44Q8N8P7 122 aa12.53□□□□□ -0.4
SPC24-206ENST00000592540 UPK3BQ9BT76 320 aa12.53□□□□□ -0.4
SPC24-206ENST00000592540 LINC00959A0A1B0GUT2 108 aa12.52□□□□□ -0.41
SPC24-206ENST00000592540 FAM19A5Q7Z5A7 132 aaPredicted RBP12.52□□□□□ -0.41
SPC24-206ENST00000592540 PLA2G2AP14555 144 aa12.51□□□□□ -0.41
SPC24-206ENST00000592540 FHL2Q14192 279 aa12.51□□□□□ -0.41
SPC24-206ENST00000592540 CCL24O00175 119 aa12.51□□□□□ -0.41
SPC24-206ENST00000592540 LINC00167Q96N53 147 aa12.5□□□□□ -0.41
SPC24-206ENST00000592540 TLN2Q9Y4G6 2542 aa12.5□□□□□ -0.41
SPC24-206ENST00000592540 RPL35AP18077 110 aaKnown RBP12.49□□□□□ -0.41
SPC24-206ENST00000592540 TMEM258P61165 79 aa12.49□□□□□ -0.41
SPC24-206ENST00000592540 WFDC10AQ9H1F0 79 aa12.49□□□□□ -0.41
SPC24-206ENST00000592540 SETXQ7Z333 2677 aaKnown RBP12.49□□□□□ -0.41
SPC24-206ENST00000592540 JMJD1CQ15652 2540 aa12.49□□□□□ -0.41
SPC24-206ENST00000592540 CENPEQ02224 2701 aa12.48□□□□□ -0.41
SPC24-206ENST00000592540 TMEM86BQ8N661 226 aa12.48□□□□□ -0.41
SPC24-206ENST00000592540 NANOS2P60321 138 aaKnown RBP12.47□□□□□ -0.41
SPC24-206ENST00000592540 JMJD7-PLA2G4BH0Y9G9 81 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms