RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 GCSHP23434 173 aa6.12□□□□□ -1.43
SMAD4-206ENST00000588860 SCGB1D4Q6XE38 83 aa6.12□□□□□ -1.43
SMAD4-206ENST00000588860 CDC42SE2Q9NRR3 84 aa6.12□□□□□ -1.43
SMAD4-206ENST00000588860 TRAV26-1A0A087WT03 109 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 A0A096LPF7 62 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 TRAV13-1A0A0B4J241 112 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 H3BRM9 83 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 TIRAPP58753 221 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 TAL2Q16559 108 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 VSIG2Q96IQ7 327 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 HIST1H4GQ99525 98 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 BIRC6Q9NR09 4857 aa6.11□□□□□ -1.43
SMAD4-206ENST00000588860 DNAH3Q8TD57 4116 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 TRAV8-3A0A0A6YYJ7 113 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 TAX1BP3O14907 124 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 IGHV3-30-3P0DP02 117 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 PTTG1IPP53801 180 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 HERVK_113P63121 156 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 LINC00242Q5T6M2 205 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 Q6ZVH6 145 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 CEND1Q8N111 149 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 COX11Q9Y6N1 276 aa6.1□□□□□ -1.43
SMAD4-206ENST00000588860 IGLV5-45A0A087WSX0 123 aa6.09□□□□□ -1.43
SMAD4-206ENST00000588860 IGHV1-58A0A0C4DH39 117 aa6.09□□□□□ -1.43
SMAD4-206ENST00000588860 IGKV3OR2-268A0A0C4DH90 116 aa6.09□□□□□ -1.43
SMAD4-206ENST00000588860 PRB2P02812 416 aaPredicted RBP6.09□□□□□ -1.43
SMAD4-206ENST00000588860 FXYD2P54710 66 aa6.09□□□□□ -1.43
SMAD4-206ENST00000588860 COX6A2Q02221 97 aa6.09□□□□□ -1.43
SMAD4-206ENST00000588860 C12orf74Q32Q52 190 aa6.09□□□□□ -1.43
SMAD4-206ENST00000588860 FAM19A3Q7Z5A8 133 aa6.09□□□□□ -1.43
SMAD4-206ENST00000588860 C11orf68Q9H3H3 251 aaKnown RBP6.09□□□□□ -1.43
SMAD4-206ENST00000588860 CDKN2A-AS1Q9UH64 79 aa6.09□□□□□ -1.43
SMAD4-206ENST00000588860 ICOSQ9Y6W8 199 aa6.09□□□□□ -1.43
SMAD4-206ENST00000588860 EPPK1P58107 5090 aaKnown RBP6.09□□□□□ -1.43
SMAD4-206ENST00000588860 IGLV4-60A0A075B6I1 120 aa6.08□□□□□ -1.44
SMAD4-206ENST00000588860 TMEM262E9PQX1 116 aa6.08□□□□□ -1.44
SMAD4-206ENST00000588860 TM2D2Q9BX73 214 aa6.08□□□□□ -1.44
SMAD4-206ENST00000588860 A0A0J9YWU9 116 aa6.07□□□□□ -1.44
SMAD4-206ENST00000588860 K7EP13 123 aa6.07□□□□□ -1.44
SMAD4-206ENST00000588860 SMIM13P0DJ93 91 aa6.07□□□□□ -1.44
SMAD4-206ENST00000588860 SRSF9Q13242 221 aaKnown RBP eCLIP6.07□□□□□ -1.44
SMAD4-206ENST00000588860 MRPL23Q16540 153 aaKnown RBP6.07□□□□□ -1.44
SMAD4-206ENST00000588860 SH2D6Q7Z4S9 175 aa6.07□□□□□ -1.44
SMAD4-206ENST00000588860 RAB37Q96AX2 223 aa6.07□□□□□ -1.44
SMAD4-206ENST00000588860 NHP2Q9NX24 153 aaKnown RBP6.07□□□□□ -1.44
SMAD4-206ENST00000588860 K7ERJ3 54 aa6.06□□□□□ -1.44
SMAD4-206ENST00000588860 RBX1P62877 108 aa6.06□□□□□ -1.44
SMAD4-206ENST00000588860 SPANXB1Q9NS25 103 aaPredicted RBP6.06□□□□□ -1.44
SMAD4-206ENST00000588860 NDUFA12Q9UI09 145 aa6.06□□□□□ -1.44
SMAD4-206ENST00000588860 A0A0J9YXY3 114 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 C9orf118A6NHY6 69 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 SMIM1B2RUZ4 78 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 K7EIL1 84 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 VAMP3Q15836 100 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 DEFB121Q5J5C9 76 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 ZFAND6Q6FIF0 208 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 Q6ZTC4 211 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 C10orf126Q8N4M7 172 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 SPATA25Q9BR10 227 aa6.05□□□□□ -1.44
SMAD4-206ENST00000588860 IGLV5-39A0A0G2JS06 123 aa6.04□□□□□ -1.44
SMAD4-206ENST00000588860 LINC00959A0A1B0GUT2 108 aa6.04□□□□□ -1.44
SMAD4-206ENST00000588860 A0A1B0GUV1 79 aa6.04□□□□□ -1.44
SMAD4-206ENST00000588860 TMEM238C9JI98 176 aa6.04□□□□□ -1.44
SMAD4-206ENST00000588860 NDUFA1O15239 70 aa6.04□□□□□ -1.44
SMAD4-206ENST00000588860 NANOS2P60321 138 aaKnown RBP6.04□□□□□ -1.44
SMAD4-206ENST00000588860 KPRPQ5T749 579 aaPredicted RBP6.04□□□□□ -1.44
SMAD4-206ENST00000588860 LELP1Q5T871 98 aa6.04□□□□□ -1.44
SMAD4-206ENST00000588860 CLPSL2Q6UWE3 100 aa6.04□□□□□ -1.44
SMAD4-206ENST00000588860 NAA38Q9BRA0 125 aaKnown RBP6.04□□□□□ -1.44
SMAD4-206ENST00000588860 TENM3Q9P273 2699 aa6.03□□□□□ -1.44
SMAD4-206ENST00000588860 IGHV3-30P01768 117 aa6.03□□□□□ -1.44
SMAD4-206ENST00000588860 IGHV3-30-5P0DP03 117 aa6.03□□□□□ -1.44
SMAD4-206ENST00000588860 SS18Q15532 418 aa6.03□□□□□ -1.44
SMAD4-206ENST00000588860 C11orf45Q8TAV5 145 aa6.03□□□□□ -1.44
SMAD4-206ENST00000588860 MRAPQ8TCY5 172 aa6.03□□□□□ -1.44
SMAD4-206ENST00000588860 H3BNG1 76 aa6.02□□□□□ -1.45
SMAD4-206ENST00000588860 H3BUT2 72 aa6.02□□□□□ -1.45
SMAD4-206ENST00000588860 ANGP03950 147 aaKnown RBP6.02□□□□□ -1.45
SMAD4-206ENST00000588860 TM2D3Q9BRN9 247 aa6.02□□□□□ -1.45
SMAD4-206ENST00000588860 DEFB131BA0A096LNP1 70 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 A0A1B0GWB2 263 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 CCL25O15444 150 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 TIMM17BO60830 172 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 XCL1P47992 114 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 LYPD5Q6UWN5 251 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 C5orf38Q86SI9 138 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 MUSTN1Q8IVN3 82 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 LINC00269Q8N2A0 174 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 COX7B2Q8TF08 81 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 LITAFQ99732 161 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 Q9H8V8 135 aa6.01□□□□□ -1.45
SMAD4-206ENST00000588860 A0A087WZ39 114 aa6□□□□□ -1.45
SMAD4-206ENST00000588860 IGHV3OR16-9A0A0B4J2B5 98 aa6□□□□□ -1.45
SMAD4-206ENST00000588860 A0A1W2PPM0 123 aa6□□□□□ -1.45
SMAD4-206ENST00000588860 IGLL5B9A064 214 aa6□□□□□ -1.45
SMAD4-206ENST00000588860 APOMO95445 188 aa6□□□□□ -1.45
SMAD4-206ENST00000588860 RPL24P83731 157 aaKnown RBP6□□□□□ -1.45
SMAD4-206ENST00000588860 REG3AQ06141 175 aa6□□□□□ -1.45
SMAD4-206ENST00000588860 UBE2V1Q13404 147 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms