RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 CAMK2N1Q7Z7J9 78 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 FRZBQ92765 325 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 UPK3BQ9BT76 320 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 RPP21Q9H633 154 aaKnown RBP2.45□□□□□ -2.02
VMP1-205ENST00000587470 MRPS16Q9Y3D3 137 aaKnown RBP2.45□□□□□ -2.02
VMP1-205ENST00000587470 ICOSQ9Y6W8 199 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 DNAH17Q9UFH2 4485 aa2.45□□□□□ -2.02
VMP1-205ENST00000587470 FAT2Q9NYQ8 4349 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 TRBV10-1A0A0K0K1A3 114 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 SMIM27A0A1W2PRY6 76 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 TMEM218A2RU14 115 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 HIGD1CA8MV81 97 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 H7C1H1 209 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 M0QY20 66 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 ADCYAP1P18509 176 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 PFN2P35080 140 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 CCL18P55774 89 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 RAB4BP61018 213 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 HERVK_113P61574 105 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 CACNG7P62955 275 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 RPL18AQ02543 176 aaKnown RBP2.44□□□□□ -2.02
VMP1-205ENST00000587470 RHOHQ15669 191 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 C10orf91Q5T1B1 145 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 SPANXN1Q5VSR9 72 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 NUP35Q8NFH5 326 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 TSKUQ8WUA8 353 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 NAT8Q9UHE5 227 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 V9GYY9 64 aa2.44□□□□□ -2.02
VMP1-205ENST00000587470 IGLV2-18A0A075B6J9 118 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 TRBV7-3A0A075B6L6 115 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 IGHV3OR16-9A0A0B4J2B5 98 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 NBDYA0A0U1RRE5 68 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 A0A1B0GUT8 65 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 M0R2N4 97 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 SRIP30626 198 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 NMUP48645 174 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 UBE2D3P61077 147 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 UBE2D2P62837 147 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 ADIRFQ15847 76 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 FAM74A4Q5TZK3 123 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 Q5VSD8 79 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 NTM-AS1Q6ZSK4 140 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 WFDC10BQ8IUB3 73 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 GATD1Q8NB37 220 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 ATP6V0E2Q8NHE4 81 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 AP1S3Q96PC3 154 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 PRADC1Q9BSG0 188 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 GTSF1LQ9H1H1 148 aa2.43□□□□□ -2.02
VMP1-205ENST00000587470 A0A1B0GXF2 115 aa2.42□□□□□ -2.02
VMP1-205ENST00000587470 TRGC1P0CF51 173 aa2.42□□□□□ -2.02
VMP1-205ENST00000587470 LELP1Q5T871 98 aa2.42□□□□□ -2.02
VMP1-205ENST00000587470 Q6ZRN7 208 aaPredicted RBP2.42□□□□□ -2.02
VMP1-205ENST00000587470 COMMD7Q86VX2 200 aa2.42□□□□□ -2.02
VMP1-205ENST00000587470 UBE2DNLQ8IWF7 75 aa2.42□□□□□ -2.02
VMP1-205ENST00000587470 SEC11CQ9BY50 192 aa2.42□□□□□ -2.02
VMP1-205ENST00000587470 TMEM191AQ9H0A3 160 aa2.42□□□□□ -2.02
VMP1-205ENST00000587470 DPH3P1Q9H4G8 78 aa2.42□□□□□ -2.02
VMP1-205ENST00000587470 CARHSP1Q9Y2V2 147 aaKnown RBP2.42□□□□□ -2.02
VMP1-205ENST00000587470 APOBP04114 4563 aaKnown RBP2.42□□□□□ -2.02
VMP1-205ENST00000587470 FLG2Q5D862 2391 aaPredicted RBP2.41□□□□□ -2.02
VMP1-205ENST00000587470 A0A087WWC5 75 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 TRBV6-8A0A0A6YYG3 113 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 TRAV26-2A0A0B4J265 109 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 A0A0J9YXV3 536 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 TRBV6-5A0A0K0K1A5 114 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 IBA57-AS1B1ANH7 110 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 SMIM17P0DL12 118 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 CXCL5P42830 114 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 RPS10P46783 165 aaKnown RBP2.41□□□□□ -2.02
VMP1-205ENST00000587470 POLR2KP53803 58 aaKnown RBP2.41□□□□□ -2.02
VMP1-205ENST00000587470 ZNF56Q15929 161 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 LINC01556Q5JQF7 62 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 C1orf134Q5TEV5 83 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 FAM104BQ5XKR9 115 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 RASL11AQ6T310 242 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 NIT1Q86X76 327 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 AMN1Q8IY45 258 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 LINC00469Q8N7U9 141 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 RPL39LQ96EH5 51 aaKnown RBP2.41□□□□□ -2.02
VMP1-205ENST00000587470 DNAJC30Q96LL9 226 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 NIT2Q9NQR4 276 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 NAT8BQ9UHF3 227 aa2.41□□□□□ -2.02
VMP1-205ENST00000587470 MYCBP2O75592 4640 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 IGKV2D-24A0A075B6R9 120 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 A0A1B0GW15 77 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 C7orf77A4D0Y5 90 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 F8W036 122 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 K7EP13 123 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 MT-ND4LP03901 98 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 MGPP08493 103 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 TAL2Q16559 108 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 IQCJQ1A5X6 159 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 MRPL51Q4U2R6 128 aaKnown RBP2.4□□□□□ -2.03
VMP1-205ENST00000587470 MRPL54Q6P161 138 aaKnown RBP2.4□□□□□ -2.03
VMP1-205ENST00000587470 DAZ4Q86SG3 579 aaKnown RBP2.4□□□□□ -2.03
VMP1-205ENST00000587470 IMMP2LQ96T52 175 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 TMEM70Q9BUB7 260 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 CHAC1Q9BUX1 264 aa2.4□□□□□ -2.03
VMP1-205ENST00000587470 TMEM242Q9NWH2 141 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms