RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 RBM12B-AS1Q9P1G2 102 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 SPCS1Q9Y6A9 102 aa3.27□□□□□ -1.89
ZNF540-204ENST00000586792 DYNC2H1Q8NCM8 4307 aaKnown RBP3.27□□□□□ -1.89
ZNF540-204ENST00000586792 IGKV2-40A0A087WW87 121 aaPredicted RBP3.26□□□□□ -1.89
ZNF540-204ENST00000586792 TRAV12-3A0A0B4J271 114 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 A8MTW9 85 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 SMIM1B2RUZ4 78 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 NDUFC2-KCTD14E9PQ53 114 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 M0R3E3 92 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 UQCRQO14949 82 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 SNCGO76070 127 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 IGKV2D-40P01614 121 aaPredicted RBP3.26□□□□□ -1.89
ZNF540-204ENST00000586792 SLC25A5P05141 298 aaKnown RBP3.26□□□□□ -1.89
ZNF540-204ENST00000586792 SRP19P09132 144 aaKnown RBP3.26□□□□□ -1.89
ZNF540-204ENST00000586792 P0DMU3 169 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 FAM231AP0DMU4 169 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 FAM231CP0DMU5 169 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 DEFB130BP0DP73 79 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 DEFB130AP0DP74 79 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 PRB4P10163 310 aaPredicted RBP3.26□□□□□ -1.89
ZNF540-204ENST00000586792 BCL2P10415 239 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 TDRG1Q3Y452 100 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 LGALS9CQ6DKI2 356 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 ATOH7Q8N100 152 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 LYPD1Q8N2G4 141 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 EXOC3-AS1Q8N2X6 119 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 PRAC1Q96KF2 57 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 Q9H3A6 140 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 CELA1Q9UNI1 258 aa3.26□□□□□ -1.89
ZNF540-204ENST00000586792 TIMM8BQ9Y5J9 83 aaPredicted RBP3.26□□□□□ -1.89
ZNF540-204ENST00000586792 APOMO95445 188 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 CXorf1O96002 111 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 CRISP2P16562 243 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 RNASE4P34096 147 aaKnown RBP3.25□□□□□ -1.89
ZNF540-204ENST00000586792 RPL23P62829 140 aaKnown RBP3.25□□□□□ -1.89
ZNF540-204ENST00000586792 HERVK_113P63121 156 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 SERF2P84101 59 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 MEIG1Q5JSS6 88 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 C15orf53Q8NAA6 179 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 PPDPFLQ8WWR9 84 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 KCNS1Q96KK3 526 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 FAM167A-AS1Q96KT0 104 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 OTORQ9NRC9 128 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 TMEM167BQ9NRX6 74 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 TRAPPC1Q9Y5R8 145 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 ALMS1Q8TCU4 4167 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 STAB2Q8WWQ8 2551 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 DNAH7Q8WXX0 4024 aa3.25□□□□□ -1.89
ZNF540-204ENST00000586792 TENM3Q9P273 2699 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 IGLV4-3A0A075B6K6 122 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 TRGV2A0A075B6R0 118 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 TRAV4A0A0B4J268 109 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 RBAKDNA6NC62 111 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 KLLNB2CW77 178 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 M0R2P5 195 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 PEX7O00628 323 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 ZNF324O75467 553 aaPredicted RBP3.24□□□□□ -1.89
ZNF540-204ENST00000586792 ARL14EPLP0DKL9 152 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 ORMDL2Q53FV1 153 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 RPL7L1Q6DKI1 246 aaKnown RBP3.24□□□□□ -1.89
ZNF540-204ENST00000586792 Q6ZRP5 223 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 FAM19A3Q7Z5A8 133 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 LINC00337Q8N6G1 96 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 TMEM75Q8N9X5 138 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 Q8TAT8 98 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 AGPAT4-IT1Q9H0P7 198 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 NOP10Q9NPE3 64 aaKnown RBP3.24□□□□□ -1.89
ZNF540-204ENST00000586792 ZNF492Q9P255 531 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 APLNQ9ULZ1 77 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 LENEPQ9Y5L5 61 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 LY96Q9Y6Y9 160 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 SACSQ9NZJ4 4579 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 AGRNO00468 2067 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 DNAH1Q9P2D7 4330 aa3.24□□□□□ -1.89
ZNF540-204ENST00000586792 KMT2CQ8NEZ4 4911 aaKnown RBP3.23□□□□□ -1.89
ZNF540-204ENST00000586792 TRGV1A0A0A0MS02 117 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 CTXND1A0A1B0GTU2 59 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 C9JQL5 133 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 NTF3P20783 257 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 CCL18P55774 89 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 MPV17L2Q567V2 206 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 ZC2HC1BQ5TFG8 222 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 C2orf66Q6UXQ4 117 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 TMEM136Q6ZRR5 245 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 BAGE3Q86Y29 109 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 BAGE2Q86Y30 109 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 LINC00526Q96FQ7 95 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 LINC01600Q96MT4 127 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 JPT2Q9H910 190 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 MANBALQ9NQG1 85 aa3.23□□□□□ -1.89
ZNF540-204ENST00000586792 STARD9Q9P2P6 4700 aa3.22□□□□□ -1.89
ZNF540-204ENST00000586792 TRBV20-1A0A075B6N2 111 aa3.22□□□□□ -1.89
ZNF540-204ENST00000586792 TRAV21A0A0B4J279 112 aa3.22□□□□□ -1.89
ZNF540-204ENST00000586792 RPL37AP8A6NKH3 93 aa3.22□□□□□ -1.89
ZNF540-204ENST00000586792 SYS1-DBNDD2H3BUS1 97 aa3.22□□□□□ -1.89
ZNF540-204ENST00000586792 HLA-DQA1P01909 254 aa3.22□□□□□ -1.89
ZNF540-204ENST00000586792 PRM2P04554 102 aa3.22□□□□□ -1.89
ZNF540-204ENST00000586792 CHTF8P0CG12 524 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms