RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TRAV10A0A0B4J240 114 aa14.03□□□□□ -0.16
ATG4D-204ENST00000586417 HSD52Q0P140 79 aa14.03□□□□□ -0.16
ATG4D-204ENST00000586417 LELP1Q5T871 98 aa14.03□□□□□ -0.16
ATG4D-204ENST00000586417 IGHV1-58A0A0C4DH39 117 aa14.02□□□□□ -0.16
ATG4D-204ENST00000586417 SPINK8P0C7L1 97 aa14.02□□□□□ -0.16
ATG4D-204ENST00000586417 IGHV3-30-3P0DP02 117 aa14.02□□□□□ -0.16
ATG4D-204ENST00000586417 PLEKHB2Q96CS7 222 aa14.02□□□□□ -0.16
ATG4D-204ENST00000586417 H3BRM9 83 aa14.01□□□□□ -0.17
ATG4D-204ENST00000586417 LGALS3P17931 250 aaKnown RBP14.01□□□□□ -0.17
ATG4D-204ENST00000586417 LYPD5Q6UWN5 251 aa14.01□□□□□ -0.17
ATG4D-204ENST00000586417 COL5A1-AS1Q5SY13 56 aa13.99□□□□□ -0.17
ATG4D-204ENST00000586417 Q8N3U1 123 aa13.99□□□□□ -0.17
ATG4D-204ENST00000586417 DYNC2H1Q8NCM8 4307 aaKnown RBP13.99□□□□□ -0.17
ATG4D-204ENST00000586417 IGKV3OR2-268A0A0C4DH90 116 aa13.99□□□□□ -0.17
ATG4D-204ENST00000586417 IGLV5-39A0A0G2JS06 123 aa13.98□□□□□ -0.17
ATG4D-204ENST00000586417 LINC00959A0A1B0GUT2 108 aa13.97□□□□□ -0.17
ATG4D-204ENST00000586417 SMIM1B2RUZ4 78 aa13.96□□□□□ -0.17
ATG4D-204ENST00000586417 SCGB1D4Q6XE38 83 aa13.96□□□□□ -0.17
ATG4D-204ENST00000586417 STARD9Q9P2P6 4700 aa13.95□□□□□ -0.18
ATG4D-204ENST00000586417 IGLL5B9A064 214 aa13.95□□□□□ -0.18
ATG4D-204ENST00000586417 TAL2Q16559 108 aa13.95□□□□□ -0.18
ATG4D-204ENST00000586417 ORAOV1Q8WV07 137 aa13.95□□□□□ -0.18
ATG4D-204ENST00000586417 IGHV3OR16-9A0A0B4J2B5 98 aa13.94□□□□□ -0.18
ATG4D-204ENST00000586417 A0A1B0GV90 55 aa13.94□□□□□ -0.18
ATG4D-204ENST00000586417 C10orf126Q8N4M7 172 aa13.94□□□□□ -0.18
ATG4D-204ENST00000586417 WWC2-AS2Q96NR7 200 aa13.94□□□□□ -0.18
ATG4D-204ENST00000586417 ZFAND6Q6FIF0 208 aa13.94□□□□□ -0.18
ATG4D-204ENST00000586417 CLPSL2Q6UWE3 100 aa13.93□□□□□ -0.18
ATG4D-204ENST00000586417 LINC00269Q8N2A0 174 aa13.93□□□□□ -0.18
ATG4D-204ENST00000586417 TM2D2Q9BX73 214 aa13.93□□□□□ -0.18
ATG4D-204ENST00000586417 GCSHP23434 173 aa13.92□□□□□ -0.18
ATG4D-204ENST00000586417 CEND1Q8N111 149 aa13.92□□□□□ -0.18
ATG4D-204ENST00000586417 MUC7Q8TAX7 377 aa13.92□□□□□ -0.18
ATG4D-204ENST00000586417 NDUFA12Q9UI09 145 aa13.92□□□□□ -0.18
ATG4D-204ENST00000586417 ANGP03950 147 aaKnown RBP13.91□□□□□ -0.18
ATG4D-204ENST00000586417 FXYD2P54710 66 aa13.91□□□□□ -0.18
ATG4D-204ENST00000586417 C15orf53Q8NAA6 179 aa13.91□□□□□ -0.18
ATG4D-204ENST00000586417 HIST1H4GQ99525 98 aa13.91□□□□□ -0.18
ATG4D-204ENST00000586417 LYSTQ99698 3801 aa13.91□□□□□ -0.18
ATG4D-204ENST00000586417 K7EP13 123 aa13.91□□□□□ -0.18
ATG4D-204ENST00000586417 ESRGQ1W209 222 aa13.91□□□□□ -0.18
ATG4D-204ENST00000586417 A0A0J9YXY3 114 aa13.9□□□□□ -0.18
ATG4D-204ENST00000586417 SS18Q15532 418 aa13.9□□□□□ -0.18
ATG4D-204ENST00000586417 NUPR2A6NF83 97 aa13.89□□□□□ -0.19
ATG4D-204ENST00000586417 CCL25O15444 150 aa13.89□□□□□ -0.19
ATG4D-204ENST00000586417 REG3AQ06141 175 aa13.89□□□□□ -0.19
ATG4D-204ENST00000586417 SPANXB1Q9NS25 103 aaPredicted RBP13.89□□□□□ -0.19
ATG4D-204ENST00000586417 A0A087WZ39 114 aa13.88□□□□□ -0.19
ATG4D-204ENST00000586417 WFDC10BQ8IUB3 73 aa13.88□□□□□ -0.19
ATG4D-204ENST00000586417 NDUFA1O15239 70 aa13.88□□□□□ -0.19
ATG4D-204ENST00000586417 PLECQ15149 4684 aaKnown RBP13.88□□□□□ -0.19
ATG4D-204ENST00000586417 XCL1P47992 114 aa13.87□□□□□ -0.19
ATG4D-204ENST00000586417 TAX1BP3O14907 124 aa13.86□□□□□ -0.19
ATG4D-204ENST00000586417 C5orf38Q86SI9 138 aa13.86□□□□□ -0.19
ATG4D-204ENST00000586417 PRR34Q9NV39 138 aa13.86□□□□□ -0.19
ATG4D-204ENST00000586417 A6NDN8 102 aa13.86□□□□□ -0.19
ATG4D-204ENST00000586417 Q6ZVH6 145 aa13.86□□□□□ -0.19
ATG4D-204ENST00000586417 LITAFQ99732 161 aa13.86□□□□□ -0.19
ATG4D-204ENST00000586417 APLNQ9ULZ1 77 aa13.86□□□□□ -0.19
ATG4D-204ENST00000586417 SRSF9Q13242 221 aaKnown RBP eCLIP13.85□□□□□ -0.19
ATG4D-204ENST00000586417 KLK5Q9Y337 293 aaPredicted RBP13.85□□□□□ -0.19
ATG4D-204ENST00000586417 CHCHD10Q8WYQ3 142 aaPredicted RBP13.84□□□□□ -0.19
ATG4D-204ENST00000586417 ZNF625Q96I27 306 aaPredicted RBP13.84□□□□□ -0.19
ATG4D-204ENST00000586417 KLK12Q9UKR0 248 aa13.84□□□□□ -0.19
ATG4D-204ENST00000586417 IGHV3-30P01768 117 aa13.83□□□□□ -0.19
ATG4D-204ENST00000586417 IGHV3-33P01772 117 aa13.83□□□□□ -0.19
ATG4D-204ENST00000586417 IGHV3-30-5P0DP03 117 aa13.83□□□□□ -0.19
ATG4D-204ENST00000586417 PTTG1IPP53801 180 aa13.83□□□□□ -0.19
ATG4D-204ENST00000586417 Q9H8V8 135 aa13.83□□□□□ -0.19
ATG4D-204ENST00000586417 CD164L2Q6UWJ8 174 aa13.83□□□□□ -0.2
ATG4D-204ENST00000586417 IGLV10-54A0A075B6I4 117 aa13.82□□□□□ -0.2
ATG4D-204ENST00000586417 ENHOQ6UWT2 76 aa13.82□□□□□ -0.2
ATG4D-204ENST00000586417 COX7B2Q8TF08 81 aa13.82□□□□□ -0.2
ATG4D-204ENST00000586417 TMEM238C9JI98 176 aa13.81□□□□□ -0.2
ATG4D-204ENST00000586417 LINC01561Q8N1V8 128 aa13.81□□□□□ -0.2
ATG4D-204ENST00000586417 CASC10Q5T4H9 136 aa13.81□□□□□ -0.2
ATG4D-204ENST00000586417 NHP2Q9NX24 153 aaKnown RBP13.81□□□□□ -0.2
ATG4D-204ENST00000586417 COX11Q9Y6N1 276 aa13.81□□□□□ -0.2
ATG4D-204ENST00000586417 ADAMTSL4-AS1Q5T5F5 129 aa13.8□□□□□ -0.2
ATG4D-204ENST00000586417 TIMM17BO60830 172 aa13.79□□□□□ -0.2
ATG4D-204ENST00000586417 FOXI1Q12951 378 aa13.79□□□□□ -0.2
ATG4D-204ENST00000586417 A0A1B0GWB2 263 aa13.78□□□□□ -0.2
ATG4D-204ENST00000586417 K7ERJ3 54 aa13.78□□□□□ -0.2
ATG4D-204ENST00000586417 LINC01556Q5JQF7 62 aa13.78□□□□□ -0.2
ATG4D-204ENST00000586417 SPANXDQ9BXN6 97 aa13.78□□□□□ -0.2
ATG4D-204ENST00000586417 SPANXCQ9NY87 97 aa13.78□□□□□ -0.2
ATG4D-204ENST00000586417 TOMM7Q9P0U1 55 aa13.78□□□□□ -0.2
ATG4D-204ENST00000586417 COX7A2LO14548 114 aa13.77□□□□□ -0.21
ATG4D-204ENST00000586417 SMIM13P0DJ93 91 aa13.77□□□□□ -0.21
ATG4D-204ENST00000586417 CCL18P55774 89 aa13.76□□□□□ -0.21
ATG4D-204ENST00000586417 HERV-K104P63124 156 aa13.76□□□□□ -0.21
ATG4D-204ENST00000586417 UBE2WQ96B02 151 aa13.76□□□□□ -0.21
ATG4D-204ENST00000586417 LINC00588Q9Y4M8 146 aa13.76□□□□□ -0.21
ATG4D-204ENST00000586417 C3orf84H3BNL1 204 aa13.76□□□□□ -0.21
ATG4D-204ENST00000586417 GAGE12HA6NDE8 117 aa13.75□□□□□ -0.21
ATG4D-204ENST00000586417 CRPP02741 224 aa13.75□□□□□ -0.21
ATG4D-204ENST00000586417 MIAQ16674 131 aa13.75□□□□□ -0.21
ATG4D-204ENST00000586417 MUSTN1Q8IVN3 82 aa13.75□□□□□ -0.21
ATG4D-204ENST00000586417 TMEM238LA0A1B0GVL6 79 aa13.74□□□□□ -0.21
ATG4D-204ENST00000586417 A6NJY4 79 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms