RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SLC35B3Q9H1N7 401 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 FAT4Q6V0I7 4981 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 CADP27708 2225 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 HERC1Q15751 4861 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 APOMO95445 188 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 EVI2AP22794 236 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 PKD1P98161 4303 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 IFITM2Q01629 132 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 DEFB121Q5J5C9 76 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 LELP1Q5T871 98 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 MALRD1Q5VYJ5 2156 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 OR11H2Q8NH07 326 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 FAM167A-AS1Q96KT0 104 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 LINC00167Q96N53 147 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 DPH3P1Q9H4G8 78 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 SND1-IT1Q9HBX3 110 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 COL7A1Q02388 2944 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 PKDREJQ9NTG1 2253 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 GGTLC3B5MD39 225 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 H3BQ85 93 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 CRYGDP07320 174 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 ALKAL2Q6UX46 152 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 NEGR1Q7Z3B1 354 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 Q86TA4 180 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 ATP6V0E2Q8NHE4 81 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 CIRBP-AS1Q8TBR5 109 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 SCRT1Q9BWW7 348 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 GNB1LQ9BYB4 327 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 NAT8BQ9UHF3 227 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 HMCN2Q8NDA2 5059 aa1.26□□□□□ -2.21
SMCHD1-211ENST00000584897 TRBV24-1A0A075B6N3 115 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 TMEM218A2RU14 115 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 SLC17A3O00476 420 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 RTL8CO15255 209 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 FAM24BQ8N5W8 94 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 DAND5Q8N907 189 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 FAM103A1Q9BTL3 118 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 SPANXA1Q9NS26 97 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 PHLDA3Q9Y5J5 127 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 ABCA4P78363 2273 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 IZUMO1RA6ND01 250 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 TMEM238C9JI98 176 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 C8orf87E5RJ46 101 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 PPP5D1E7EU14 171 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 ZNF861PO60384 105 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 ZNF324O75467 553 aaPredicted RBP1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 IGHV3-53P01767 116 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 CD7P09564 240 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 TGFBR1P36897 503 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 S100A12P80511 92 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 MIAQ16674 131 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 LINC01556Q5JQF7 62 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 C10orf55Q5SWW7 151 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 LINC01545Q5VT33 79 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 MIC13Q5XKP0 118 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 BAGE2Q86Y30 109 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 KRTAP7-1Q8IUC3 87 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 UBE2DNLQ8IWF7 75 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 Q8N9L7 120 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 Q8NAQ8 132 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 TVP23CQ96ET8 276 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 LINC00052Q96N35 136 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 SEC11CQ9BY50 192 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 NXT2Q9NPJ8 142 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 ANAPC11Q9NYG5 84 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 TRBV20OR9-2A0A075B6H5 130 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 C1orf196B1AJZ1 125 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 ARPC5O15511 151 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 IGLV2-8P01709 118 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 FXYD7P58549 80 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 TMEM141Q96I45 108 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 SAMD10Q9BYL1 202 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 TMEM191AQ9H0A3 160 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 ZNF586Q9NXT0 402 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 DEFB131BA0A096LNP1 70 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 IGHV1-24A0A0C4DH33 117 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 COX7A2LO14548 114 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 ZNF207O43670 478 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 CST7O76096 145 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 SRP19P09132 144 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 ARL14EPLP0DKL9 152 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 MRPS36P82909 103 aaKnown RBP1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 UNQ9165/PRO28630Q6UXU0 137 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 PATE2Q6UY27 113 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 FAM213BQ8TBF2 198 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 CSMD3Q7Z407 3707 aa1.25□□□□□ -2.21
SMCHD1-211ENST00000584897 TENM2Q9NT68 2774 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 TRGV2A0A075B6R0 118 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 IGHV3OR16-8A0A075B7F1 116 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 TRGV4A0A0C4DH28 118 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 A0A1B0GUT8 65 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 NTF3P20783 257 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 CD24P25063 80 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 SPINT4Q6UDR6 99 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 SVBPQ8N300 66 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 C9orf62Q8N4C0 152 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 ZFAND2AQ8N6M9 145 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 SFT2D1Q8WV19 159 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 HIGD2AQ9BW72 106 aa1.24□□□□□ -2.21
SMCHD1-211ENST00000584897 MRPL16Q9NX20 251 aaKnown RBP1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms