RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CEND1Q8N111 149 aa6.48□□□□□ -1.37
SS18-220ENST00000582092 DNAH3Q8TD57 4116 aa6.47□□□□□ -1.37
SS18-220ENST00000582092 A0A1B0GUV1 79 aa6.47□□□□□ -1.37
SS18-220ENST00000582092 IGHV3-30-3P0DP02 117 aa6.47□□□□□ -1.37
SS18-220ENST00000582092 CIRBPQ14011 172 aaKnown RBP6.47□□□□□ -1.37
SS18-220ENST00000582092 CASC10Q5T4H9 136 aa6.47□□□□□ -1.37
SS18-220ENST00000582092 TMEM238C9JI98 176 aa6.46□□□□□ -1.38
SS18-220ENST00000582092 H3BNG1 76 aa6.46□□□□□ -1.38
SS18-220ENST00000582092 CCL25O15444 150 aa6.46□□□□□ -1.38
SS18-220ENST00000582092 LINC00242Q5T6M2 205 aa6.46□□□□□ -1.38
SS18-220ENST00000582092 CDKN2A-AS1Q9UH64 79 aa6.46□□□□□ -1.38
SS18-220ENST00000582092 NDUFA12Q9UI09 145 aa6.46□□□□□ -1.38
SS18-220ENST00000582092 STAB2Q8WWQ8 2551 aa6.46□□□□□ -1.38
SS18-220ENST00000582092 DEFB131BA0A096LNP1 70 aa6.45□□□□□ -1.38
SS18-220ENST00000582092 TRAV8-3A0A0A6YYJ7 113 aa6.45□□□□□ -1.38
SS18-220ENST00000582092 ANGP03950 147 aaKnown RBP6.45□□□□□ -1.38
SS18-220ENST00000582092 RBX1P62877 108 aa6.45□□□□□ -1.38
SS18-220ENST00000582092 LELP1Q5T871 98 aa6.45□□□□□ -1.38
SS18-220ENST00000582092 FAM19A3Q7Z5A8 133 aa6.45□□□□□ -1.38
SS18-220ENST00000582092 FAM104AQ969W3 186 aa6.45□□□□□ -1.38
SS18-220ENST00000582092 IGLV4-60A0A075B6I1 120 aa6.44□□□□□ -1.38
SS18-220ENST00000582092 IGLV5-45A0A087WSX0 123 aa6.44□□□□□ -1.38
SS18-220ENST00000582092 NANOS2P60321 138 aaKnown RBP6.44□□□□□ -1.38
SS18-220ENST00000582092 COX6A2Q02221 97 aa6.44□□□□□ -1.38
SS18-220ENST00000582092 VAMP3Q15836 100 aa6.44□□□□□ -1.38
SS18-220ENST00000582092 ZFAND6Q6FIF0 208 aa6.44□□□□□ -1.38
SS18-220ENST00000582092 Q6ZTC4 211 aa6.44□□□□□ -1.38
SS18-220ENST00000582092 TENM3Q9P273 2699 aa6.43□□□□□ -1.38
SS18-220ENST00000582092 TRAV10A0A0B4J240 114 aa6.43□□□□□ -1.38
SS18-220ENST00000582092 LINC00959A0A1B0GUT2 108 aa6.43□□□□□ -1.38
SS18-220ENST00000582092 PRSS2P07478 247 aa6.43□□□□□ -1.38
SS18-220ENST00000582092 RPL24P83731 157 aaKnown RBP6.43□□□□□ -1.38
SS18-220ENST00000582092 COPS9Q8WXC6 57 aa6.43□□□□□ -1.38
SS18-220ENST00000582092 RAB37Q96AX2 223 aa6.43□□□□□ -1.38
SS18-220ENST00000582092 TM2D2Q9BX73 214 aa6.43□□□□□ -1.38
SS18-220ENST00000582092 SPANXB1Q9NS25 103 aaPredicted RBP6.43□□□□□ -1.38
SS18-220ENST00000582092 NHP2Q9NX24 153 aaKnown RBP6.43□□□□□ -1.38
SS18-220ENST00000582092 COX11Q9Y6N1 276 aa6.43□□□□□ -1.38
SS18-220ENST00000582092 CRPP02741 224 aa6.42□□□□□ -1.38
SS18-220ENST00000582092 MALP21145 153 aa6.42□□□□□ -1.38
SS18-220ENST00000582092 TSPEAR-AS2P59090 65 aa6.42□□□□□ -1.38
SS18-220ENST00000582092 LYPD5Q6UWN5 251 aa6.42□□□□□ -1.38
SS18-220ENST00000582092 LINC00269Q8N2A0 174 aa6.42□□□□□ -1.38
SS18-220ENST00000582092 TOMM7Q9P0U1 55 aa6.42□□□□□ -1.38
SS18-220ENST00000582092 A0A0J9YXY3 114 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 NDUFA1O15239 70 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 XCL1P47992 114 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 FXYD2P54710 66 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 HERV-K104P63124 156 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 REG3AQ06141 175 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 C6orf226Q5I0X4 101 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 MEIG1Q5JSS6 88 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 CLPSL2Q6UWE3 100 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 Q6ZVH6 145 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 COX7B2Q8TF08 81 aa6.41□□□□□ -1.38
SS18-220ENST00000582092 DNAH9Q9NYC9 4486 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 NBEAL2Q6ZNJ1 2754 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 NUPR2A6NF83 97 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 C9orf118A6NHY6 69 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 TAX1BP3O14907 124 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 CFAP161Q6P656 301 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 SFTA2Q6UW10 78 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 C5orf38Q86SI9 138 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 C15orf53Q8NAA6 179 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 Q9H8V8 135 aa6.4□□□□□ -1.38
SS18-220ENST00000582092 KLK5Q9Y337 293 aaPredicted RBP6.4□□□□□ -1.38
SS18-220ENST00000582092 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.39□□□□□ -1.39
SS18-220ENST00000582092 IGLV5-39A0A0G2JS06 123 aa6.39□□□□□ -1.39
SS18-220ENST00000582092 SMIM1B2RUZ4 78 aa6.39□□□□□ -1.39
SS18-220ENST00000582092 H3BUT2 72 aa6.39□□□□□ -1.39
SS18-220ENST00000582092 COX7A2LO14548 114 aa6.39□□□□□ -1.39
SS18-220ENST00000582092 TIMM17BO60830 172 aa6.39□□□□□ -1.39
SS18-220ENST00000582092 APOMO95445 188 aa6.39□□□□□ -1.39
SS18-220ENST00000582092 GTF2H5Q6ZYL4 71 aa6.39□□□□□ -1.39
SS18-220ENST00000582092 A0A087WZ39 114 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 LCE6AA0A183 80 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 IGHV3-30P01768 117 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 IGHV3-33P01772 117 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 IGHV3-30-5P0DP03 117 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 FABP2P12104 132 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 IFITM1P13164 125 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 CD164L2Q6UWJ8 174 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 LINC01561Q8N1V8 128 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 CHCHD10Q8WYQ3 142 aaPredicted RBP6.38□□□□□ -1.39
SS18-220ENST00000582092 ZNF625Q96I27 306 aaPredicted RBP6.38□□□□□ -1.39
SS18-220ENST00000582092 KLK12Q9UKR0 248 aa6.38□□□□□ -1.39
SS18-220ENST00000582092 IGLV10-54A0A075B6I4 117 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 TRAV8-4A0A0B4J246 113 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 IGHV3OR16-9A0A0B4J2B5 98 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 GAGE10A6NGK3 116 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 CCL18P55774 89 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 CKS1BP61024 79 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 LYRM7Q5U5X0 104 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 MUSTN1Q8IVN3 82 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 C10orf126Q8N4M7 172 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 SPANXDQ9BXN6 97 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 SPANXCQ9NY87 97 aa6.37□□□□□ -1.39
SS18-220ENST00000582092 K7EP13 123 aa6.36□□□□□ -1.39
SS18-220ENST00000582092 LINC00158P58513 81 aa6.36□□□□□ -1.39
SS18-220ENST00000582092 MIAQ16674 131 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms