RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 TEN1Q86WV5 123 aa14.27□□□□□ -0.12
SMG8-203ENST00000578922 FAM104AQ969W3 186 aa14.27□□□□□ -0.12
SMG8-203ENST00000578922 A0A0J9YXY3 114 aa14.27□□□□□ -0.13
SMG8-203ENST00000578922 M0QXV9 152 aa14.27□□□□□ -0.13
SMG8-203ENST00000578922 IGHV3-33P01772 117 aa14.27□□□□□ -0.13
SMG8-203ENST00000578922 MUSTN1Q8IVN3 82 aa14.27□□□□□ -0.13
SMG8-203ENST00000578922 PPDPFLQ8WWR9 84 aa14.27□□□□□ -0.13
SMG8-203ENST00000578922 TRBV10-1A0A0K0K1A3 114 aa14.26□□□□□ -0.13
SMG8-203ENST00000578922 TINCRA0A1B0GVN0 87 aa14.26□□□□□ -0.13
SMG8-203ENST00000578922 LYRM9A8MSI8 78 aa14.26□□□□□ -0.13
SMG8-203ENST00000578922 ERG28Q9UKR5 140 aa14.26□□□□□ -0.13
SMG8-203ENST00000578922 IGHV1-58A0A0C4DH39 117 aa14.25□□□□□ -0.13
SMG8-203ENST00000578922 SMAGPQ0VAQ4 97 aa14.25□□□□□ -0.13
SMG8-203ENST00000578922 IGHV3-64A0A075B6Q5 118 aa14.24□□□□□ -0.13
SMG8-203ENST00000578922 TRBV6-4A0A1B0GX49 114 aa14.24□□□□□ -0.13
SMG8-203ENST00000578922 CIDEAO60543 219 aa14.24□□□□□ -0.13
SMG8-203ENST00000578922 CHCHD7Q9BUK0 85 aa14.24□□□□□ -0.13
SMG8-203ENST00000578922 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.24□□□□□ -0.13
SMG8-203ENST00000578922 IGKV2-29A2NJV5 120 aaPredicted RBP14.24□□□□□ -0.13
SMG8-203ENST00000578922 DAD1P61803 113 aa14.23□□□□□ -0.13
SMG8-203ENST00000578922 UBE2D4Q9Y2X8 147 aa14.23□□□□□ -0.13
SMG8-203ENST00000578922 CEMP1Q6PRD7 247 aaPredicted RBP14.23□□□□□ -0.13
SMG8-203ENST00000578922 SPANXDQ9BXN6 97 aa14.22□□□□□ -0.13
SMG8-203ENST00000578922 SPANXCQ9NY87 97 aa14.22□□□□□ -0.13
SMG8-203ENST00000578922 EIF4EBP3O60516 100 aaPredicted RBP14.22□□□□□ -0.13
SMG8-203ENST00000578922 VSIG2Q96IQ7 327 aa14.21□□□□□ -0.13
SMG8-203ENST00000578922 LITAFQ99732 161 aa14.21□□□□□ -0.13
SMG8-203ENST00000578922 SPART-AS1P0CW21 52 aa14.2□□□□□ -0.14
SMG8-203ENST00000578922 DAZ4Q86SG3 579 aaKnown RBP14.2□□□□□ -0.14
SMG8-203ENST00000578922 DAZ3Q9NR90 486 aaKnown RBP14.2□□□□□ -0.14
SMG8-203ENST00000578922 NDUFA12Q9UI09 145 aa14.2□□□□□ -0.14
SMG8-203ENST00000578922 HTN3P15516 51 aa14.19□□□□□ -0.14
SMG8-203ENST00000578922 DEFB121Q5J5C9 76 aa14.19□□□□□ -0.14
SMG8-203ENST00000578922 NTM-AS1Q6ZSK4 140 aa14.19□□□□□ -0.14
SMG8-203ENST00000578922 CARD19Q96LW7 228 aa14.19□□□□□ -0.14
SMG8-203ENST00000578922 TENM3Q9P273 2699 aa14.19□□□□□ -0.14
SMG8-203ENST00000578922 TRBV30A0A0K0K1B3 111 aa14.18□□□□□ -0.14
SMG8-203ENST00000578922 K7EIL1 84 aa14.18□□□□□ -0.14
SMG8-203ENST00000578922 CDIP1Q9H305 208 aa14.18□□□□□ -0.14
SMG8-203ENST00000578922 TRAV8-3A0A0A6YYJ7 113 aa14.17□□□□□ -0.14
SMG8-203ENST00000578922 GYPEP15421 78 aa14.17□□□□□ -0.14
SMG8-203ENST00000578922 RNASE13Q5GAN3 156 aaKnown RBP14.17□□□□□ -0.14
SMG8-203ENST00000578922 MRAPQ8TCY5 172 aa14.17□□□□□ -0.14
SMG8-203ENST00000578922 LINC01600Q96MT4 127 aa14.17□□□□□ -0.14
SMG8-203ENST00000578922 SLC25A20O43772 301 aa14.17□□□□□ -0.14
SMG8-203ENST00000578922 TIMM17BO60830 172 aa14.17□□□□□ -0.14
SMG8-203ENST00000578922 TIRAPP58753 221 aa14.17□□□□□ -0.14
SMG8-203ENST00000578922 ATXN8Q156A1 80 aa14.17□□□□□ -0.14
SMG8-203ENST00000578922 PRO0255Q9UI72 69 aa14.17□□□□□ -0.14
SMG8-203ENST00000578922 GEMIN7Q9H840 131 aaKnown RBP14.16□□□□□ -0.14
SMG8-203ENST00000578922 MIAQ16674 131 aa14.16□□□□□ -0.14
SMG8-203ENST00000578922 Q1RN00 199 aa14.16□□□□□ -0.14
SMG8-203ENST00000578922 ZFAND6Q6FIF0 208 aa14.16□□□□□ -0.14
SMG8-203ENST00000578922 ANKRD29Q8N6D5 301 aa14.16□□□□□ -0.14
SMG8-203ENST00000578922 A0A096LPF7 62 aa14.15□□□□□ -0.14
SMG8-203ENST00000578922 PAX4O43316 350 aa14.15□□□□□ -0.14
SMG8-203ENST00000578922 ATP5G1P05496 136 aa14.15□□□□□ -0.14
SMG8-203ENST00000578922 Q6ZUT4 128 aa14.15□□□□□ -0.14
SMG8-203ENST00000578922 IGLV5-45A0A087WSX0 123 aa14.15□□□□□ -0.15
SMG8-203ENST00000578922 F5H768 121 aa14.15□□□□□ -0.15
SMG8-203ENST00000578922 C9JAW5 83 aa14.14□□□□□ -0.15
SMG8-203ENST00000578922 TMEM262E9PQX1 116 aa14.14□□□□□ -0.15
SMG8-203ENST00000578922 PRSS2P07478 247 aa14.14□□□□□ -0.15
SMG8-203ENST00000578922 LINC00694P0DN24 101 aa14.14□□□□□ -0.15
SMG8-203ENST00000578922 IFITM1P13164 125 aa14.14□□□□□ -0.15
SMG8-203ENST00000578922 H7C2G1 150 aa14.13□□□□□ -0.15
SMG8-203ENST00000578922 A0A1B0GV72 72 aa14.13□□□□□ -0.15
SMG8-203ENST00000578922 TRAV26-1A0A087WT03 109 aa14.12□□□□□ -0.15
SMG8-203ENST00000578922 SPINK8P0C7L1 97 aa14.12□□□□□ -0.15
SMG8-203ENST00000578922 ADAMTSL4-AS1Q5T5F5 129 aa14.12□□□□□ -0.15
SMG8-203ENST00000578922 KPRPQ5T749 579 aaPredicted RBP14.12□□□□□ -0.15
SMG8-203ENST00000578922 A0A0J9YWU9 116 aa14.11□□□□□ -0.15
SMG8-203ENST00000578922 LINC01620Q4KN68 170 aa14.11□□□□□ -0.15
SMG8-203ENST00000578922 DGAT2L7PQ6IED9 249 aa14.11□□□□□ -0.15
SMG8-203ENST00000578922 NDUFA1O15239 70 aa14.1□□□□□ -0.15
SMG8-203ENST00000578922 TRIAP1O43715 76 aa14.09□□□□□ -0.15
SMG8-203ENST00000578922 COX6CP09669 75 aa14.09□□□□□ -0.15
SMG8-203ENST00000578922 HERVK_113P63121 156 aa14.09□□□□□ -0.15
SMG8-203ENST00000578922 FAM19A3Q7Z5A8 133 aa14.09□□□□□ -0.15
SMG8-203ENST00000578922 TMEM243Q9BU79 118 aa14.09□□□□□ -0.15
SMG8-203ENST00000578922 CDKN2A-AS1Q9UH64 79 aa14.09□□□□□ -0.15
SMG8-203ENST00000578922 CSDC2Q9Y534 153 aaKnown RBP14.09□□□□□ -0.15
SMG8-203ENST00000578922 ICOSQ9Y6W8 199 aa14.09□□□□□ -0.15
SMG8-203ENST00000578922 TRBV10-2A0A0K0K1G8 114 aa14.08□□□□□ -0.16
SMG8-203ENST00000578922 UBE2L6O14933 153 aa14.08□□□□□ -0.16
SMG8-203ENST00000578922 TRBV6-8A0A0A6YYG3 113 aa14.07□□□□□ -0.16
SMG8-203ENST00000578922 CIRBPQ14011 172 aaKnown RBP14.07□□□□□ -0.16
SMG8-203ENST00000578922 GAGE6Q13070 117 aa14.07□□□□□ -0.16
SMG8-203ENST00000578922 IGLV5-39A0A0G2JS06 123 aa14.06□□□□□ -0.16
SMG8-203ENST00000578922 TMEM101Q96IK0 257 aa14.06□□□□□ -0.16
SMG8-203ENST00000578922 C11orf68Q9H3H3 251 aaKnown RBP14.06□□□□□ -0.16
SMG8-203ENST00000578922 Q6ZTC4 211 aa14.06□□□□□ -0.16
SMG8-203ENST00000578922 CHCHD5Q9BSY4 110 aa14.06□□□□□ -0.16
SMG8-203ENST00000578922 RPL13AP40429 203 aaKnown RBP14.05□□□□□ -0.16
SMG8-203ENST00000578922 XGP55808 180 aa14.05□□□□□ -0.16
SMG8-203ENST00000578922 MT-ATP8P03928 68 aa14.04□□□□□ -0.16
SMG8-203ENST00000578922 NANOS2P60321 138 aaKnown RBP14.04□□□□□ -0.16
SMG8-203ENST00000578922 COPS9Q8WXC6 57 aa14.04□□□□□ -0.16
SMG8-203ENST00000578922 CKS1BP61024 79 aa14.03□□□□□ -0.16
SMG8-203ENST00000578922 LINC00242Q5T6M2 205 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms