RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 RMI2Q96E14 147 aa6.17□□□□□ -1.42
NPLOC4-219ENST00000576713 MAP1LC3AQ9H492 121 aa6.17□□□□□ -1.42
NPLOC4-219ENST00000576713 LINC00959A0A1B0GUT2 108 aa6.16□□□□□ -1.42
NPLOC4-219ENST00000576713 PRSS1P07477 247 aa6.16□□□□□ -1.42
NPLOC4-219ENST00000576713 ZNF664Q8N3J9 261 aa6.16□□□□□ -1.42
NPLOC4-219ENST00000576713 OR5A1Q8NGJ0 315 aa6.16□□□□□ -1.42
NPLOC4-219ENST00000576713 PRSS3P2Q8NHM4 247 aa6.16□□□□□ -1.42
NPLOC4-219ENST00000576713 CHCHD10Q8WYQ3 142 aaPredicted RBP6.16□□□□□ -1.42
NPLOC4-219ENST00000576713 URB1-AS1Q96HZ7 61 aa6.16□□□□□ -1.42
NPLOC4-219ENST00000576713 LAMTOR2Q9Y2Q5 125 aa6.16□□□□□ -1.42
NPLOC4-219ENST00000576713 PCLOQ9Y6V0 5065 aa6.16□□□□□ -1.42
NPLOC4-219ENST00000576713 VPS13BQ7Z7G8 4022 aa6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 IGLV5-52A0A0A0MRZ9 124 aa6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 CDK2AP2O75956 126 aa6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 HAMPP81172 84 aa6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 FABP9Q0Z7S8 132 aa6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 C10orf25Q5T742 122 aa6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 ZC2HC1BQ5TFG8 222 aa6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 C15orf56Q8N910 161 aa6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 TIMM21Q9BVV7 248 aa6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.42
NPLOC4-219ENST00000576713 TRAV8-4A0A0B4J246 113 aa6.14□□□□□ -1.43
NPLOC4-219ENST00000576713 CCL25O15444 150 aa6.14□□□□□ -1.43
NPLOC4-219ENST00000576713 XCL1P47992 114 aa6.14□□□□□ -1.43
NPLOC4-219ENST00000576713 TMEM101Q96IK0 257 aa6.14□□□□□ -1.43
NPLOC4-219ENST00000576713 IGLV4-3A0A075B6K6 122 aa6.13□□□□□ -1.43
NPLOC4-219ENST00000576713 LOC105371267A0A1B0GV96 52 aa6.13□□□□□ -1.43
NPLOC4-219ENST00000576713 SCO1O75880 301 aa6.13□□□□□ -1.43
NPLOC4-219ENST00000576713 MT-ND6P03923 174 aa6.13□□□□□ -1.43
NPLOC4-219ENST00000576713 RAB5AP20339 215 aa6.13□□□□□ -1.43
NPLOC4-219ENST00000576713 XGP55808 180 aa6.13□□□□□ -1.43
NPLOC4-219ENST00000576713 LINC00173Q6ZV60 143 aa6.13□□□□□ -1.43
NPLOC4-219ENST00000576713 TRAPPC1Q9Y5R8 145 aa6.13□□□□□ -1.43
NPLOC4-219ENST00000576713 A0A096LNJ9 63 aa6.12□□□□□ -1.43
NPLOC4-219ENST00000576713 TRAV13-1A0A0B4J241 112 aa6.12□□□□□ -1.43
NPLOC4-219ENST00000576713 LINC01546A6NGU7 62 aa6.12□□□□□ -1.43
NPLOC4-219ENST00000576713 IGIPA6NJ69 53 aa6.12□□□□□ -1.43
NPLOC4-219ENST00000576713 COX19Q49B96 90 aa6.12□□□□□ -1.43
NPLOC4-219ENST00000576713 C2orf66Q6UXQ4 117 aa6.12□□□□□ -1.43
NPLOC4-219ENST00000576713 C18orf32Q8TCD1 76 aa6.12□□□□□ -1.43
NPLOC4-219ENST00000576713 NXT2Q9NPJ8 142 aaKnown RBP6.12□□□□□ -1.43
NPLOC4-219ENST00000576713 SPANXA1Q9NS26 97 aa6.12□□□□□ -1.43
NPLOC4-219ENST00000576713 MRPS36P82909 103 aaKnown RBP6.11□□□□□ -1.43
NPLOC4-219ENST00000576713 HIGD2BQ4VC39 106 aa6.11□□□□□ -1.43
NPLOC4-219ENST00000576713 LINC00526Q96FQ7 95 aa6.11□□□□□ -1.43
NPLOC4-219ENST00000576713 SMCO4Q9NRQ5 59 aa6.11□□□□□ -1.43
NPLOC4-219ENST00000576713 PYGO1Q9Y3Y4 419 aa6.11□□□□□ -1.43
NPLOC4-219ENST00000576713 SRRM2Q9UQ35 2752 aaKnown RBP6.1□□□□□ -1.43
NPLOC4-219ENST00000576713 COLCA2A8K830 154 aa6.1□□□□□ -1.43
NPLOC4-219ENST00000576713 PANO1I0J062 215 aa6.1□□□□□ -1.43
NPLOC4-219ENST00000576713 COX6A2Q02221 97 aa6.1□□□□□ -1.43
NPLOC4-219ENST00000576713 ORMDL2Q53FV1 153 aa6.1□□□□□ -1.43
NPLOC4-219ENST00000576713 TMEM18Q96B42 140 aa6.1□□□□□ -1.43
NPLOC4-219ENST00000576713 CYSLTR1Q9Y271 337 aa6.1□□□□□ -1.43
NPLOC4-219ENST00000576713 hDV102S1A0JD36 115 aa6.09□□□□□ -1.43
NPLOC4-219ENST00000576713 SS18Q15532 418 aa6.09□□□□□ -1.43
NPLOC4-219ENST00000576713 PMCHL1Q16048 86 aa6.09□□□□□ -1.43
NPLOC4-219ENST00000576713 CD164L2Q6UWJ8 174 aa6.09□□□□□ -1.43
NPLOC4-219ENST00000576713 Q6ZSA8 131 aa6.09□□□□□ -1.43
NPLOC4-219ENST00000576713 C5orf38Q86SI9 138 aa6.09□□□□□ -1.43
NPLOC4-219ENST00000576713 TOMM6Q96B49 74 aa6.09□□□□□ -1.43
NPLOC4-219ENST00000576713 GVQW2A0A096LPI5 108 aaPredicted RBP6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 A0A0A0MQY5 61 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 IGHV3OR16-9A0A0B4J2B5 98 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 IFITM10A6NMD0 228 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 C1orf196B1AJZ1 125 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 K7EMI3 77 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 TRGC2P03986 189 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 LINC00242Q5T6M2 205 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 TMEM141Q96I45 108 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 AMELXQ99217 191 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 MYCBP2O75592 4640 aa6.08□□□□□ -1.44
NPLOC4-219ENST00000576713 UBE2D1P51668 147 aa6.07□□□□□ -1.44
NPLOC4-219ENST00000576713 CNBPP62633 177 aaKnown RBP6.07□□□□□ -1.44
NPLOC4-219ENST00000576713 C14orf177Q52M58 125 aa6.07□□□□□ -1.44
NPLOC4-219ENST00000576713 C9orf163Q8N9P6 203 aa6.07□□□□□ -1.44
NPLOC4-219ENST00000576713 MPLKIPQ8TAP9 179 aa6.07□□□□□ -1.44
NPLOC4-219ENST00000576713 PKHD1L1Q86WI1 4243 aa6.06□□□□□ -1.44
NPLOC4-219ENST00000576713 COX7A2LO14548 114 aa6.06□□□□□ -1.44
NPLOC4-219ENST00000576713 LINC00614P0C842 121 aa6.06□□□□□ -1.44
NPLOC4-219ENST00000576713 SMAGPQ0VAQ4 97 aa6.06□□□□□ -1.44
NPLOC4-219ENST00000576713 SDIM1Q6ZPB5 146 aa6.06□□□□□ -1.44
NPLOC4-219ENST00000576713 FA2HQ7L5A8 372 aa6.06□□□□□ -1.44
NPLOC4-219ENST00000576713 TIMM17AQ99595 171 aa6.06□□□□□ -1.44
NPLOC4-219ENST00000576713 IGLV4-69A0A075B6H9 119 aa6.05□□□□□ -1.44
NPLOC4-219ENST00000576713 IGHV1-58A0A0C4DH39 117 aa6.05□□□□□ -1.44
NPLOC4-219ENST00000576713 SMR3BP02814 79 aaPredicted RBP6.05□□□□□ -1.44
NPLOC4-219ENST00000576713 TEX43Q6ZNM6 134 aa6.05□□□□□ -1.44
NPLOC4-219ENST00000576713 ERASQ7Z444 233 aa6.05□□□□□ -1.44
NPLOC4-219ENST00000576713 SCGB3A1Q96QR1 104 aa6.05□□□□□ -1.44
NPLOC4-219ENST00000576713 A0A0J9YXV3 536 aa6.04□□□□□ -1.44
NPLOC4-219ENST00000576713 CHTF8P0CG12 524 aa6.04□□□□□ -1.44
NPLOC4-219ENST00000576713 PDZD11Q5EBL8 140 aa6.04□□□□□ -1.44
NPLOC4-219ENST00000576713 SCXQ7RTU7 201 aa6.04□□□□□ -1.44
NPLOC4-219ENST00000576713 FAM19A3Q7Z5A8 133 aa6.04□□□□□ -1.44
NPLOC4-219ENST00000576713 VCX2Q9H322 139 aa6.04□□□□□ -1.44
NPLOC4-219ENST00000576713 IGHV3-64A0A075B6Q5 118 aa6.03□□□□□ -1.44
NPLOC4-219ENST00000576713 NUPR1O60356 82 aa6.03□□□□□ -1.44
NPLOC4-219ENST00000576713 KIAA0087Q14695 138 aa6.03□□□□□ -1.44
NPLOC4-219ENST00000576713 CFAP161Q6P656 301 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms