RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 LEPROTL1O95214 131 aa9.56□□□□□ -0.88
NPLOC4-209ENST00000572760 LINC00242Q5T6M2 205 aa9.56□□□□□ -0.88
NPLOC4-209ENST00000572760 IFI27L1Q96BM0 104 aa9.56□□□□□ -0.88
NPLOC4-209ENST00000572760 GEMIN7Q9H840 131 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-209ENST00000572760 IGHV1-58A0A0C4DH39 117 aa9.55□□□□□ -0.88
NPLOC4-209ENST00000572760 hDV102S1A0JD36 115 aa9.55□□□□□ -0.88
NPLOC4-209ENST00000572760 APOMO95445 188 aa9.55□□□□□ -0.88
NPLOC4-209ENST00000572760 FABP4P15090 132 aa9.55□□□□□ -0.88
NPLOC4-209ENST00000572760 CST9LQ9H4G1 147 aa9.55□□□□□ -0.88
NPLOC4-209ENST00000572760 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
NPLOC4-209ENST00000572760 A0A0J9YXV3 536 aa9.54□□□□□ -0.88
NPLOC4-209ENST00000572760 HERVK_113P63121 156 aa9.54□□□□□ -0.88
NPLOC4-209ENST00000572760 HSPB8Q9UJY1 196 aa9.54□□□□□ -0.88
NPLOC4-209ENST00000572760 IGLV5-52A0A0A0MRZ9 124 aa9.53□□□□□ -0.88
NPLOC4-209ENST00000572760 IGHV3OR16-9A0A0B4J2B5 98 aa9.53□□□□□ -0.88
NPLOC4-209ENST00000572760 COX6A2Q02221 97 aa9.53□□□□□ -0.88
NPLOC4-209ENST00000572760 HIGD2BQ4VC39 106 aa9.53□□□□□ -0.88
NPLOC4-209ENST00000572760 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
NPLOC4-209ENST00000572760 FUSP35637 526 aaKnown RBP eCLIP9.52□□□□□ -0.89
NPLOC4-209ENST00000572760 KRTAP10-2P60368 255 aa9.52□□□□□ -0.89
NPLOC4-209ENST00000572760 CDPF1Q6NVV7 123 aa9.52□□□□□ -0.89
NPLOC4-209ENST00000572760 C15orf56Q8N910 161 aa9.52□□□□□ -0.89
NPLOC4-209ENST00000572760 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 C16orf90A8MZG2 172 aa9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 H0Y8G0 127 aa9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 ZNF561-AS1K7EIQ3 104 aa9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 S100A6P06703 90 aa9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 COA6Q5JTJ3 125 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 FAM19A3Q7Z5A8 133 aa9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 LINC00469Q8N7U9 141 aa9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 PACRGQ96M98 296 aaPredicted RBP9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 CHTOPQ9Y3Y2 248 aaKnown RBP9.51□□□□□ -0.89
NPLOC4-209ENST00000572760 A0A087WZ39 114 aa9.5□□□□□ -0.89
NPLOC4-209ENST00000572760 ORAOV1Q8WV07 137 aa9.5□□□□□ -0.89
NPLOC4-209ENST00000572760 GVQW2A0A096LPI5 108 aaPredicted RBP9.49□□□□□ -0.89
NPLOC4-209ENST00000572760 TRAV12-1A0A0B4J245 112 aa9.49□□□□□ -0.89
NPLOC4-209ENST00000572760 CHAC1Q9BUX1 264 aa9.49□□□□□ -0.89
NPLOC4-209ENST00000572760 MAP1LC3CQ9BXW4 147 aa9.49□□□□□ -0.89
NPLOC4-209ENST00000572760 CDKN2A-AS1Q9UH64 79 aa9.49□□□□□ -0.89
NPLOC4-209ENST00000572760 FAT2Q9NYQ8 4349 aa9.49□□□□□ -0.89
NPLOC4-209ENST00000572760 IGHV3-64A0A075B6Q5 118 aa9.48□□□□□ -0.89
NPLOC4-209ENST00000572760 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.48□□□□□ -0.89
NPLOC4-209ENST00000572760 IGLC3P0DOY3 106 aa9.48□□□□□ -0.89
NPLOC4-209ENST00000572760 SPAG11BQ08648 103 aa9.48□□□□□ -0.89
NPLOC4-209ENST00000572760 LINC01561Q8N1V8 128 aa9.48□□□□□ -0.89
NPLOC4-209ENST00000572760 H3BRM9 83 aa9.47□□□□□ -0.89
NPLOC4-209ENST00000572760 GCSHP23434 173 aa9.47□□□□□ -0.89
NPLOC4-209ENST00000572760 OR10D4PQ8NGN7 298 aa9.47□□□□□ -0.89
NPLOC4-209ENST00000572760 LINC00526Q96FQ7 95 aa9.47□□□□□ -0.89
NPLOC4-209ENST00000572760 IGLV4-69A0A075B6H9 119 aa9.46□□□□□ -0.9
NPLOC4-209ENST00000572760 F8VRH5 84 aa9.46□□□□□ -0.9
NPLOC4-209ENST00000572760 PRSS2P07478 247 aa9.46□□□□□ -0.9
NPLOC4-209ENST00000572760 S100A2P29034 98 aa9.46□□□□□ -0.9
NPLOC4-209ENST00000572760 TOMM7Q9P0U1 55 aa9.46□□□□□ -0.9
NPLOC4-209ENST00000572760 IGLV5-45A0A087WSX0 123 aa9.45□□□□□ -0.9
NPLOC4-209ENST00000572760 C11orf86A6NJI1 115 aa9.45□□□□□ -0.9
NPLOC4-209ENST00000572760 TMEM170BQ5T4T1 132 aa9.45□□□□□ -0.9
NPLOC4-209ENST00000572760 CAMK2N2Q96S95 79 aa9.45□□□□□ -0.9
NPLOC4-209ENST00000572760 MRPL35Q9NZE8 188 aaKnown RBP9.45□□□□□ -0.9
NPLOC4-209ENST00000572760 CNBPP62633 177 aaKnown RBP9.44□□□□□ -0.9
NPLOC4-209ENST00000572760 SYCNQ0VAF6 134 aa9.44□□□□□ -0.9
NPLOC4-209ENST00000572760 SPINK8P0C7L1 97 aa9.43□□□□□ -0.9
NPLOC4-209ENST00000572760 ZNF22P17026 224 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-209ENST00000572760 ODF1Q14990 250 aa9.43□□□□□ -0.9
NPLOC4-209ENST00000572760 C2orf48Q96LS8 159 aa9.43□□□□□ -0.9
NPLOC4-209ENST00000572760 CARD19Q96LW7 228 aa9.43□□□□□ -0.9
NPLOC4-209ENST00000572760 PKD1P98161 4303 aa9.42□□□□□ -0.9
NPLOC4-209ENST00000572760 SLPIP03973 132 aa9.42□□□□□ -0.9
NPLOC4-209ENST00000572760 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
NPLOC4-209ENST00000572760 C6orf226Q5I0X4 101 aa9.42□□□□□ -0.9
NPLOC4-209ENST00000572760 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
NPLOC4-209ENST00000572760 SMIM1B2RUZ4 78 aa9.41□□□□□ -0.9
NPLOC4-209ENST00000572760 F8WDY8 70 aa9.41□□□□□ -0.9
NPLOC4-209ENST00000572760 SYS1-DBNDD2H3BUS1 97 aa9.41□□□□□ -0.9
NPLOC4-209ENST00000572760 NDUFA1O15239 70 aa9.41□□□□□ -0.9
NPLOC4-209ENST00000572760 KRTDAPP60985 99 aa9.41□□□□□ -0.9
NPLOC4-209ENST00000572760 CKS1BP61024 79 aa9.41□□□□□ -0.9
NPLOC4-209ENST00000572760 SNRPEP62304 92 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-209ENST00000572760 Q8IZM0 81 aa9.41□□□□□ -0.9
NPLOC4-209ENST00000572760 PMCHL2Q9BQD1 86 aa9.41□□□□□ -0.9
NPLOC4-209ENST00000572760 DNAH11Q96DT5 4516 aa9.4□□□□□ -0.9
NPLOC4-209ENST00000572760 DPM2O94777 84 aa9.4□□□□□ -0.9
NPLOC4-209ENST00000572760 PLNP26678 52 aa9.4□□□□□ -0.9
NPLOC4-209ENST00000572760 KRTAP10-1P60331 282 aa9.4□□□□□ -0.9
NPLOC4-209ENST00000572760 PET117Q6UWS5 81 aa9.4□□□□□ -0.9
NPLOC4-209ENST00000572760 Q6ZRU5 148 aa9.4□□□□□ -0.9
NPLOC4-209ENST00000572760 HIST3H2BBQ8N257 126 aa9.4□□□□□ -0.9
NPLOC4-209ENST00000572760 COX7B2Q8TF08 81 aa9.4□□□□□ -0.9
NPLOC4-209ENST00000572760 C3orf79P0CE67 100 aa9.39□□□□□ -0.91
NPLOC4-209ENST00000572760 KIAA0087Q14695 138 aa9.39□□□□□ -0.91
NPLOC4-209ENST00000572760 PKIGQ9Y2B9 76 aa9.39□□□□□ -0.91
NPLOC4-209ENST00000572760 IGKCP01834 107 aa9.38□□□□□ -0.91
NPLOC4-209ENST00000572760 C2orf82Q6UX34 121 aa9.38□□□□□ -0.91
NPLOC4-209ENST00000572760 C20orf202A1L168 122 aa9.37□□□□□ -0.91
NPLOC4-209ENST00000572760 CXCL5P42830 114 aa9.37□□□□□ -0.91
NPLOC4-209ENST00000572760 UNQ6190/PRO20217Q6UXQ8 127 aa9.37□□□□□ -0.91
NPLOC4-209ENST00000572760 HIST1H2BLQ99880 126 aa9.37□□□□□ -0.91
NPLOC4-209ENST00000572760 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
NPLOC4-209ENST00000572760 HERVK_113P61574 105 aa9.36□□□□□ -0.91
NPLOC4-209ENST00000572760 LINC01545Q5VT33 79 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms