RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 DEFB136Q30KP8 78 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 DEFB114Q30KQ6 69 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 C12orf74Q32Q52 190 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 OCIAD2Q56VL3 154 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 TMEM170BQ5T4T1 132 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 NEGR1Q7Z3B1 354 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 DNAJC30Q96LL9 226 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 LINC01587Q99440 93 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 VPS25Q9BRG1 176 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 LINC00467Q9BRT7 94 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 TTTY13Q9BZ97 58 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 SPTA1P02549 2419 aa2.34□□□□□ -2.03
UBR1-211ENST00000569971 SPTBN2O15020 2390 aa2.34□□□□□ -2.04
UBR1-211ENST00000569971 ABCA2Q9BZC7 2435 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 TRBV7-3A0A075B6L6 115 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 A0A0U1RQV1 116 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 IGLL5B9A064 214 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 NDUFC2-KCTD14E9PQ53 114 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 J3QQQ9 107 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 K7ERJ3 54 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 LEPROTO15243 131 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 CD28P10747 220 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 CRYBA4P53673 196 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 RPL39P62891 51 aaKnown RBP2.33□□□□□ -2.04
UBR1-211ENST00000569971 SYCNQ0VAF6 134 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 SMAGPQ0VAQ4 97 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 RRN3P1Q2M238 152 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 PLEKHB2Q96CS7 222 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 CAMK2N2Q96S95 79 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 NAA38Q9BRA0 125 aaKnown RBP2.33□□□□□ -2.04
UBR1-211ENST00000569971 SPANXB1Q9NS25 103 aaPredicted RBP2.33□□□□□ -2.04
UBR1-211ENST00000569971 SPANXA1Q9NS26 97 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 TPRP12270 2363 aaKnown RBP2.33□□□□□ -2.04
UBR1-211ENST00000569971 COL6A6A6NMZ7 2263 aa2.33□□□□□ -2.04
UBR1-211ENST00000569971 DCHS1Q96JQ0 3298 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 HIVEP3Q5T1R4 2406 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 TMEM223A0PJW6 202 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 TMEM238C9JI98 176 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 F8W1H4 67 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 J3QR89 54 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 IGHV3-53P01767 116 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 EMP1P54849 157 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 RBX1P62877 108 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 COTL1Q14019 142 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 CFAP126Q5VTH2 177 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 MORN3Q6PF18 240 aaPredicted RBP2.32□□□□□ -2.04
UBR1-211ENST00000569971 SLC25A29Q8N8R3 303 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 Q8N9L7 120 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 ZNF418Q8TF45 676 aaPredicted RBP2.32□□□□□ -2.04
UBR1-211ENST00000569971 TIMM21Q9BVV7 248 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 MRPL16Q9NX20 251 aaKnown RBP2.32□□□□□ -2.04
UBR1-211ENST00000569971 BSNQ9UPA5 3926 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 LAMA5O15230 3695 aa2.32□□□□□ -2.04
UBR1-211ENST00000569971 TRBV20-1A0A075B6N2 111 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.31□□□□□ -2.04
UBR1-211ENST00000569971 IGHV3-73A0A0B4J1V6 119 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 LOC107984156A0A0G2JMH3 177 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 A0A0J9YY99 117 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 TRBV10-1A0A0K0K1A3 114 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 TINCRA0A1B0GVN0 87 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 APOMO95445 188 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 P0DMU3 169 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 FAM231AP0DMU4 169 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 FAM231CP0DMU5 169 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 ZNF22P17026 224 aaPredicted RBP2.31□□□□□ -2.04
UBR1-211ENST00000569971 UBE2D1P51668 147 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 KRTAP12-2P59991 146 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 ARL17AQ8IVW1 177 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 WFDC11Q8NEX6 87 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 ZNRF2Q8NHG8 242 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 DEFB104AQ8WTQ1 72 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 C16orf95Q9H693 158 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 PRO1854Q9UHT4 67 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 PRO0461Q9UI25 63 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 ABCA1O95477 2261 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 WNK2Q9Y3S1 2297 aa2.31□□□□□ -2.04
UBR1-211ENST00000569971 SMG1Q96Q15 3661 aaKnown RBP2.3□□□□□ -2.04
UBR1-211ENST00000569971 DOPEY1Q5JWR5 2465 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 PKD1L2Q7Z442 2459 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 SPTBN4Q9H254 2564 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 TRGV1A0A0A0MS02 117 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 TRAV4A0A0B4J268 109 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 IGHV1-58A0A0C4DH39 117 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 H3BMG7 143 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 J3QKU1 62 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 IGHV3-30P01768 117 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 IGHV3-30-3P0DP02 117 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 IGHV3-30-5P0DP03 117 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 PSMB2P49721 201 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 TSPEAR-AS2P59090 65 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 MRPS36P82909 103 aaKnown RBP2.3□□□□□ -2.04
UBR1-211ENST00000569971 CIRBPQ14011 172 aaKnown RBP2.3□□□□□ -2.04
UBR1-211ENST00000569971 DAZ4Q86SG3 579 aaKnown RBP2.3□□□□□ -2.04
UBR1-211ENST00000569971 NDUFA11Q86Y39 141 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 TMEM263Q8WUH6 116 aaKnown RBP2.3□□□□□ -2.04
UBR1-211ENST00000569971 COPS9Q8WXC6 57 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 AMELXQ99217 191 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 C8orf17Q9NRJ1 99 aa2.3□□□□□ -2.04
UBR1-211ENST00000569971 KLK12Q9UKR0 248 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms