RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 XKRY2A2RUG3 117 aa3.67□□□□□ -1.82
HERPUD1-217ENST00000569429 M0R381 172 aa3.67□□□□□ -1.82
HERPUD1-217ENST00000569429 ARMS2P0C7Q2 107 aa3.67□□□□□ -1.82
HERPUD1-217ENST00000569429 RAB5AP20339 215 aa3.67□□□□□ -1.82
HERPUD1-217ENST00000569429 RPS20P60866 119 aaKnown RBP3.67□□□□□ -1.82
HERPUD1-217ENST00000569429 LINC00526Q96FQ7 95 aa3.67□□□□□ -1.82
HERPUD1-217ENST00000569429 RNASE7Q9H1E1 156 aaKnown RBP3.67□□□□□ -1.82
HERPUD1-217ENST00000569429 H3BVH4 76 aa3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 GATCO43716 136 aaKnown RBP3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 ADIRFQ15847 76 aa3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 SPANXN1Q5VSR9 72 aa3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 SMIM12Q96EX1 92 aa3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 SFRP2Q96HF1 295 aa3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 IMMP2LQ96T52 175 aa3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 KIR2DL4Q99706 377 aa3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 IL36BQ9NZH7 164 aa3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 GPR98Q8WXG9 6306 aa3.66□□□□□ -1.82
HERPUD1-217ENST00000569429 IGLV8-61A0A075B6I0 122 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 TRBV24-1A0A075B6N3 115 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 TRAV9-1A0A075B6T8 112 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 IGHV1-24A0A0C4DH33 117 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 IGHV1-58A0A0C4DH39 117 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 APOMO95445 188 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 SMIM17P0DL12 118 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 SUMO2P61956 95 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 RPL23P62829 140 aaKnown RBP3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 TWIST1Q15672 202 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 COX8CQ7Z4L0 72 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 CHCHD10Q8WYQ3 142 aaPredicted RBP3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 BORCS7Q96B45 105 aa3.65□□□□□ -1.83
HERPUD1-217ENST00000569429 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 TRBV20OR9-2A0A075B6H5 130 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 A8MWL6 223 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 K7EN84 100 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 S100A8P05109 93 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 FOXI1Q12951 378 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 LINC00242Q5T6M2 205 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 LYZL1Q6UWQ5 148 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 COX6B2Q6YFQ2 88 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 SMIM15Q7Z3B0 74 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 LINC01551Q86U37 167 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 ZFP82Q8N141 532 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 NUP35Q8NFH5 326 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 ISOC2Q96AB3 205 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 PGLYRP4Q96LB8 373 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 YPEL4Q96NS1 127 aa3.64□□□□□ -1.83
HERPUD1-217ENST00000569429 IGLV4-69A0A075B6H9 119 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 C19orf71A6NCJ1 209 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 F2Z2F3 143 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 MGPP08493 103 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 NTF3P20783 257 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 CAMPP49913 170 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 RAB4BP61018 213 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 ZNF56Q15929 161 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 COX19Q49B96 90 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 FAM229BQ4G0N7 80 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 OR10AG1Q8NH19 301 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
HERPUD1-217ENST00000569429 LOC100996750A0A140TA64 210 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 FAM168BA1KXE4 195 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 C5orf52A6NGY3 159 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 PRYO14603 147 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 OR5AL1P0C617 328 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 AKR1D1P51857 326 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 LINC00310P59036 64 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 SNRPEP62304 92 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 UBE2BP63146 152 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 RPL18AQ02543 176 aaKnown RBP3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 DNLZQ5SXM8 178 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 FAM231DQ6ZW35 169 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 OSTCQ9NRP0 149 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 ANAPC11Q9NYG5 84 aa3.62□□□□□ -1.83
HERPUD1-217ENST00000569429 TGIF2-C20orf24A0A0A6YYL0 155 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 IGKV3OR2-268A0A0C4DH90 116 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 SNAI2O43623 268 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 TRGC2P03986 189 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 CXCL1P09341 107 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 TRGC1P0CF51 173 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 S100A2P29034 98 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 FABP9Q0Z7S8 132 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 RIGQ13278 110 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 PCOTHQ58A44 107 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 SPAG11AQ6PDA7 123 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 DAND5Q8N907 189 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 TMEM243Q9BU79 118 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 NAT8BQ9UHF3 227 aa3.61□□□□□ -1.83
HERPUD1-217ENST00000569429 A0A1B0GUT8 65 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 HIGD1CA8MV81 97 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 NUPR1O60356 82 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 IGLC6P0CF74 106 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 SMIM6P0DI80 62 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 NDUFA6P56556 154 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 RASL11AQ6T310 242 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 KRTAP7-1Q8IUC3 87 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 LINC00518Q8N0U6 118 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 AP1S3Q96PC3 154 aa3.6□□□□□ -1.83
HERPUD1-217ENST00000569429 OPRPNQ99935 248 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms