RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 EIF5AP63241 154 aaKnown RBP1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 PRCDQ00LT1 54 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 ZNF90Q03938 601 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 WFDC2Q14508 124 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 MSMO1Q15800 293 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 KRTAP25-1Q3LHN0 102 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 DNLZQ5SXM8 178 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 FOXI2Q6ZQN5 318 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 TMEM136Q6ZRR5 245 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 WFDC10BQ8IUB3 73 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 C1orf64Q8NEQ6 169 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 OR10P1Q8NGE3 313 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 OR4C16Q8NGL9 310 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 IMMP2LQ96T52 175 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 FXYD6Q9H0Q3 95 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 SMDT1Q9H4I9 107 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 FKBP11Q9NYL4 201 aa1.84□□□□□ -2.11
HMGB1P6-201ENST00000569046 GABARAPH6UMI1 98 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 H7BYZ3 331 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 TMEM256-PLSCR3K7ERE1 68 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 PDCD5O14737 125 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 PSCAO43653 123 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 NPYP01303 97 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 IGLC1P0CG04 106 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 RPL28P46779 137 aaKnown RBP1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 XCL1P47992 114 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 AKR1C1Q04828 323 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 LINC01554Q52M75 96 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 LYPD5Q6UWN5 251 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 Q6ZTI0 123 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 C8orf59Q8N0T1 100 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 TERB2Q8NHR7 220 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 SMCR5Q8TEV8 140 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 DUSP21Q9H596 190 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 OSTCQ9NRP0 149 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 SPANXA1Q9NS26 97 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 RPRMQ9NS64 109 aa1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 TIMM8BQ9Y5J9 83 aaPredicted RBP1.83□□□□□ -2.12
HMGB1P6-201ENST00000569046 TRAV30A0A087WSZ9 112 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 A0A087WX48 190 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 TRAV12-3A0A0B4J271 114 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 TRDV1A0A1B0GX56 115 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 C11orf86A6NJI1 115 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 M0R378 163 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 IGHV3-30P01768 117 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 IGHV3-33P01772 117 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 CXCL1P09341 107 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 MT1HL1P0DM35 61 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 IGHV3-30-5P0DP03 117 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 HIST1H4AP62805 103 aaKnown RBP1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 SUPT4H1P63272 117 aaKnown RBP1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 HIST1H1AQ02539 215 aaPredicted RBP1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 MIAQ16674 131 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 MIR17HGQ75NE6 70 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 OR8I2Q8N0Y5 310 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 HIST3H2BBQ8N257 126 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 Q8N814 137 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 RNASE11Q8TAA1 199 aaKnown RBP1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 SCGB3A1Q96QR1 104 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 TP53RKQ96S44 253 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 VPS25Q9BRG1 176 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 PDCD10Q9BUL8 212 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 XAGE1AQ9HD64 81 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 LY96Q9Y6Y9 160 aa1.82□□□□□ -2.12
HMGB1P6-201ENST00000569046 LPAP08519 4548 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 TRGV2A0A075B6R0 118 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 TRGV1A0A0A0MS02 117 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 TRAV1-2A0A0B4J238 106 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 CEBPZOSA8MTT3 80 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 K7ERJ3 54 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 GZMBP10144 247 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 BCL2P10415 239 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 TMBIM6P55061 237 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 YPEL3P61236 119 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 UBE2BP63146 152 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 SLC38A11Q08AI6 406 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 MOBPQ13875 183 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 SPINT4Q6UDR6 99 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 TMEM229BQ8NBD8 167 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 NUP35Q8NFH5 326 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 SLC25A21Q9BQT8 299 aaPredicted RBP1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 OTORQ9NRC9 128 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 TXNL4BQ9NX01 149 aaKnown RBP1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 MRPL16Q9NX20 251 aaKnown RBP1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 SCN3BQ9NY72 215 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 COPZ2Q9P299 210 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 HSPB8Q9UJY1 196 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 PAIP2BQ9ULR5 123 aaKnown RBP1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 LAMTOR2Q9Y2Q5 125 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 TIMM9Q9Y5J7 89 aa1.81□□□□□ -2.12
HMGB1P6-201ENST00000569046 C3orf85A0A1B0GTC6 90 aa1.8□□□□□ -2.12
HMGB1P6-201ENST00000569046 A0A1B0GU33 70 aa1.8□□□□□ -2.12
HMGB1P6-201ENST00000569046 A8MTW9 85 aa1.8□□□□□ -2.12
HMGB1P6-201ENST00000569046 H3BPC8 53 aa1.8□□□□□ -2.12
HMGB1P6-201ENST00000569046 CORTO00230 105 aa1.8□□□□□ -2.12
HMGB1P6-201ENST00000569046 SFTA3P0C7M3 94 aa1.8□□□□□ -2.12
HMGB1P6-201ENST00000569046 FABP2P12104 132 aa1.8□□□□□ -2.12
HMGB1P6-201ENST00000569046 LGALS3P17931 250 aaKnown RBP1.8□□□□□ -2.12
HMGB1P6-201ENST00000569046 EVI2AP22794 236 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms