RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 LOC107984640A0A0U1RRK4 108 aa11.47□□□□□ -0.57
COMMD4-218ENST00000567377 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
COMMD4-218ENST00000567377 Q8N8P6 123 aa11.47□□□□□ -0.57
COMMD4-218ENST00000567377 CAMK2N2Q96S95 79 aa11.47□□□□□ -0.57
COMMD4-218ENST00000567377 TRAV9-1A0A075B6T8 112 aa11.46□□□□□ -0.57
COMMD4-218ENST00000567377 IGHV3OR16-9A0A0B4J2B5 98 aa11.46□□□□□ -0.57
COMMD4-218ENST00000567377 TMEM218A2RU14 115 aa11.46□□□□□ -0.57
COMMD4-218ENST00000567377 IFITM10A6NMD0 228 aa11.46□□□□□ -0.57
COMMD4-218ENST00000567377 Q6ZRU5 148 aa11.46□□□□□ -0.57
COMMD4-218ENST00000567377 FAM104AQ969W3 186 aa11.46□□□□□ -0.57
COMMD4-218ENST00000567377 NPSP0C0P6 89 aa11.45□□□□□ -0.58
COMMD4-218ENST00000567377 G0S2P27469 103 aa11.45□□□□□ -0.58
COMMD4-218ENST00000567377 RNF151Q2KHN1 245 aa11.45□□□□□ -0.58
COMMD4-218ENST00000567377 ORMDL2Q53FV1 153 aa11.45□□□□□ -0.58
COMMD4-218ENST00000567377 LOC389332A0A1B0GUA5 103 aa11.44□□□□□ -0.58
COMMD4-218ENST00000567377 TMEM141Q96I45 108 aa11.44□□□□□ -0.58
COMMD4-218ENST00000567377 OPRPNQ99935 248 aaPredicted RBP11.44□□□□□ -0.58
COMMD4-218ENST00000567377 SEC11CQ9BY50 192 aa11.44□□□□□ -0.58
COMMD4-218ENST00000567377 NXT2Q9NPJ8 142 aaKnown RBP11.44□□□□□ -0.58
COMMD4-218ENST00000567377 CYSLTR1Q9Y271 337 aa11.44□□□□□ -0.58
COMMD4-218ENST00000567377 TGIF2-C20orf24A0A0A6YYL0 155 aa11.43□□□□□ -0.58
COMMD4-218ENST00000567377 PTTG1IPP53801 180 aa11.43□□□□□ -0.58
COMMD4-218ENST00000567377 IFITM2Q01629 132 aa11.43□□□□□ -0.58
COMMD4-218ENST00000567377 SPAG11BQ08648 103 aa11.43□□□□□ -0.58
COMMD4-218ENST00000567377 Q6ZN92 141 aa11.42□□□□□ -0.58
COMMD4-218ENST00000567377 IGLV4-3A0A075B6K6 122 aa11.41□□□□□ -0.58
COMMD4-218ENST00000567377 HNRNPA3P51991 378 aaKnown RBP11.41□□□□□ -0.58
COMMD4-218ENST00000567377 C2orf66Q6UXQ4 117 aa11.41□□□□□ -0.58
COMMD4-218ENST00000567377 TEX43Q6ZNM6 134 aa11.41□□□□□ -0.58
COMMD4-218ENST00000567377 ORAOV1Q8WV07 137 aa11.41□□□□□ -0.58
COMMD4-218ENST00000567377 C2orf88Q9BSF0 95 aa11.41□□□□□ -0.58
COMMD4-218ENST00000567377 LRP1Q07954 4544 aaKnown RBP11.4□□□□□ -0.58
COMMD4-218ENST00000567377 A0A087WZ39 114 aa11.4□□□□□ -0.58
COMMD4-218ENST00000567377 ADCYAP1P18509 176 aa11.4□□□□□ -0.58
COMMD4-218ENST00000567377 S100PP25815 95 aa11.4□□□□□ -0.58
COMMD4-218ENST00000567377 PAPPA-AS1Q5QFB9 102 aa11.4□□□□□ -0.58
COMMD4-218ENST00000567377 MRPL35Q9NZE8 188 aaKnown RBP11.4□□□□□ -0.58
COMMD4-218ENST00000567377 PKHD1L1Q86WI1 4243 aa11.39□□□□□ -0.59
COMMD4-218ENST00000567377 NDUFA1O15239 70 aa11.39□□□□□ -0.59
COMMD4-218ENST00000567377 GAGE2BQ13066 116 aa11.39□□□□□ -0.59
COMMD4-218ENST00000567377 COX19Q49B96 90 aa11.39□□□□□ -0.59
COMMD4-218ENST00000567377 SERTAD4-AS1Q5TG53 156 aa11.39□□□□□ -0.59
COMMD4-218ENST00000567377 LINC01561Q8N1V8 128 aa11.39□□□□□ -0.59
COMMD4-218ENST00000567377 VCX2Q9H322 139 aa11.39□□□□□ -0.59
COMMD4-218ENST00000567377 LINC00242Q5T6M2 205 aa11.38□□□□□ -0.59
COMMD4-218ENST00000567377 LINC01549A6NIU2 74 aa11.37□□□□□ -0.59
COMMD4-218ENST00000567377 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.37□□□□□ -0.59
COMMD4-218ENST00000567377 GNB1LQ9BYB4 327 aa11.37□□□□□ -0.59
COMMD4-218ENST00000567377 UBE2D1P51668 147 aa11.36□□□□□ -0.59
COMMD4-218ENST00000567377 PRR3P79522 188 aaKnown RBP11.36□□□□□ -0.59
COMMD4-218ENST00000567377 AMELXQ99217 191 aa11.36□□□□□ -0.59
COMMD4-218ENST00000567377 FAT3Q8TDW7 4589 aa11.35□□□□□ -0.59
COMMD4-218ENST00000567377 IGIPA6NJ69 53 aa11.35□□□□□ -0.59
COMMD4-218ENST00000567377 SEC11AP67812 179 aa11.35□□□□□ -0.59
COMMD4-218ENST00000567377 Q6ZRP5 223 aa11.35□□□□□ -0.59
COMMD4-218ENST00000567377 COMMD7Q86VX2 200 aa11.35□□□□□ -0.59
COMMD4-218ENST00000567377 TLX1NBP0CAT3 122 aa11.34□□□□□ -0.59
COMMD4-218ENST00000567377 RPL18AQ02543 176 aaKnown RBP11.34□□□□□ -0.59
COMMD4-218ENST00000567377 TIMM17AQ99595 171 aa11.34□□□□□ -0.59
COMMD4-218ENST00000567377 MT-ND6P03923 174 aa11.33□□□□□ -0.6
COMMD4-218ENST00000567377 RHEBQ15382 184 aa11.33□□□□□ -0.6
COMMD4-218ENST00000567377 C10orf91Q5T1B1 145 aa11.33□□□□□ -0.6
COMMD4-218ENST00000567377 FAM19A3Q7Z5A8 133 aa11.33□□□□□ -0.6
COMMD4-218ENST00000567377 TRBV30A0A0K0K1B3 111 aa11.32□□□□□ -0.6
COMMD4-218ENST00000567377 KIAA0087Q14695 138 aa11.32□□□□□ -0.6
COMMD4-218ENST00000567377 KIAA1644Q3SXP7 199 aa11.32□□□□□ -0.6
COMMD4-218ENST00000567377 TOMM6Q96B49 74 aa11.32□□□□□ -0.6
COMMD4-218ENST00000567377 C9orf116Q5BN46 136 aaPredicted RBP11.31□□□□□ -0.6
COMMD4-218ENST00000567377 UNQ6190/PRO20217Q6UXQ8 127 aa11.31□□□□□ -0.6
COMMD4-218ENST00000567377 LINC00173Q6ZV60 143 aa11.31□□□□□ -0.6
COMMD4-218ENST00000567377 CARHSP1Q9Y2V2 147 aaKnown RBP11.31□□□□□ -0.6
COMMD4-218ENST00000567377 A0A0J9YXV3 536 aa11.3□□□□□ -0.6
COMMD4-218ENST00000567377 A0A1W2PNN7 141 aa11.3□□□□□ -0.6
COMMD4-218ENST00000567377 HERVK_113P63121 156 aa11.3□□□□□ -0.6
COMMD4-218ENST00000567377 SPINK6Q6UWN8 80 aa11.3□□□□□ -0.6
COMMD4-218ENST00000567377 ERASQ7Z444 233 aa11.3□□□□□ -0.6
COMMD4-218ENST00000567377 C10orf25Q5T742 122 aa11.29□□□□□ -0.6
COMMD4-218ENST00000567377 PACRGQ96M98 296 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-218ENST00000567377 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
COMMD4-218ENST00000567377 C6orf48Q9UBA6 75 aa11.29□□□□□ -0.6
COMMD4-218ENST00000567377 LINC01546A6NGU7 62 aa11.28□□□□□ -0.6
COMMD4-218ENST00000567377 PRSS2P07478 247 aa11.28□□□□□ -0.6
COMMD4-218ENST00000567377 SCGB3A1Q96QR1 104 aa11.28□□□□□ -0.6
COMMD4-218ENST00000567377 RPS10P5Q9NQ39 176 aa11.28□□□□□ -0.6
COMMD4-218ENST00000567377 REG3GQ6UW15 175 aa11.27□□□□□ -0.61
COMMD4-218ENST00000567377 GEMIN7Q9H840 131 aaKnown RBP11.27□□□□□ -0.61
COMMD4-218ENST00000567377 FABP9Q0Z7S8 132 aa11.26□□□□□ -0.61
COMMD4-218ENST00000567377 C6orf226Q5I0X4 101 aa11.26□□□□□ -0.61
COMMD4-218ENST00000567377 ZC2HC1BQ5TFG8 222 aa11.26□□□□□ -0.61
COMMD4-218ENST00000567377 Q8IZM0 81 aa11.26□□□□□ -0.61
COMMD4-218ENST00000567377 NDUFC2-KCTD14E9PQ53 114 aa11.25□□□□□ -0.61
COMMD4-218ENST00000567377 MT1HL1P0DM35 61 aa11.25□□□□□ -0.61
COMMD4-218ENST00000567377 CKS1BP61024 79 aa11.25□□□□□ -0.61
COMMD4-218ENST00000567377 SRSF9Q13242 221 aaKnown RBP eCLIP11.25□□□□□ -0.61
COMMD4-218ENST00000567377 MRPL18Q9H0U6 180 aaKnown RBP11.25□□□□□ -0.61
COMMD4-218ENST00000567377 FA2HQ7L5A8 372 aa11.24□□□□□ -0.61
COMMD4-218ENST00000567377 LINC01600Q96MT4 127 aa11.24□□□□□ -0.61
COMMD4-218ENST00000567377 SMCO4Q9NRQ5 59 aa11.24□□□□□ -0.61
COMMD4-218ENST00000567377 NDUFA5Q16718 116 aa11.23□□□□□ -0.61
COMMD4-218ENST00000567377 GAGE2EQ4V326 116 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms