RNA–Protein interactions for RNA: ENST00000566126.5

CLK3-217, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 732 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-217ENST00000566126 MRPL55Q7Z7F7 128 aaKnown RBP9.19□□□□□ -0.94
CLK3-217ENST00000566126 ST20Q9HBF5 79 aa9.19□□□□□ -0.94
CLK3-217ENST00000566126 TRBV27A0A0K0K1C4 114 aa9.18□□□□□ -0.94
CLK3-217ENST00000566126 A0A1B0GVG6 124 aa9.18□□□□□ -0.94
CLK3-217ENST00000566126 LINC00469Q8N7U9 141 aa9.18□□□□□ -0.94
CLK3-217ENST00000566126 ENKURQ8TC29 256 aa9.18□□□□□ -0.94
CLK3-217ENST00000566126 TP73-AS1Q9UF72 201 aa9.18□□□□□ -0.94
CLK3-217ENST00000566126 UPK1BO75841 260 aa9.17□□□□□ -0.94
CLK3-217ENST00000566126 CENPWQ5EE01 88 aa9.17□□□□□ -0.94
CLK3-217ENST00000566126 RPL37AP8A6NKH3 93 aa9.16□□□□□ -0.94
CLK3-217ENST00000566126 PFDN1O60925 122 aa9.16□□□□□ -0.94
CLK3-217ENST00000566126 XAGE1AQ9HD64 81 aa9.16□□□□□ -0.94
CLK3-217ENST00000566126 ZNF727A8MUV8 499 aa9.15□□□□□ -0.94
CLK3-217ENST00000566126 UBE2AP49459 152 aa9.15□□□□□ -0.94
CLK3-217ENST00000566126 DAND5Q8N907 189 aa9.15□□□□□ -0.94
CLK3-217ENST00000566126 FAM104AQ969W3 186 aa9.15□□□□□ -0.94
CLK3-217ENST00000566126 LINC00167Q96N53 147 aa9.15□□□□□ -0.94
CLK3-217ENST00000566126 MARVELD1Q9BSK0 173 aa9.15□□□□□ -0.94
CLK3-217ENST00000566126 BORCS7-ASMTA0A0B4J1R7 106 aa9.14□□□□□ -0.95
CLK3-217ENST00000566126 KRTAP4-16G5E9R7 235 aaPredicted RBP9.13□□□□□ -0.95
CLK3-217ENST00000566126 SMIM15Q7Z3B0 74 aa9.13□□□□□ -0.95
CLK3-217ENST00000566126 IGLV8-61A0A075B6I0 122 aa9.12□□□□□ -0.95
CLK3-217ENST00000566126 A0A1B0GV50 99 aa9.12□□□□□ -0.95
CLK3-217ENST00000566126 SMAGPQ0VAQ4 97 aa9.12□□□□□ -0.95
CLK3-217ENST00000566126 C11orf52Q96A22 123 aa9.11□□□□□ -0.95
CLK3-217ENST00000566126 TIMM21Q9BVV7 248 aa9.11□□□□□ -0.95
CLK3-217ENST00000566126 RAB19A4D1S5 217 aa9.1□□□□□ -0.95
CLK3-217ENST00000566126 FCER1GP30273 86 aa9.1□□□□□ -0.95
CLK3-217ENST00000566126 PCOTHQ58A44 107 aa9.1□□□□□ -0.95
CLK3-217ENST00000566126 Q5BKY6 102 aa9.1□□□□□ -0.95
CLK3-217ENST00000566126 NUDT10Q8NFP7 164 aa9.1□□□□□ -0.95
CLK3-217ENST00000566126 NUDT11Q96G61 164 aa9.1□□□□□ -0.95
CLK3-217ENST00000566126 C4orf48Q5BLP8 95 aa9.09□□□□□ -0.95
CLK3-217ENST00000566126 SFT2D1Q8WV19 159 aa9.09□□□□□ -0.95
CLK3-217ENST00000566126 GAGE10A6NGK3 116 aa9.08□□□□□ -0.96
CLK3-217ENST00000566126 KRTAP19-1Q8IUB9 90 aa9.08□□□□□ -0.96
CLK3-217ENST00000566126 KCNRGQ8N5I3 272 aa9.08□□□□□ -0.96
CLK3-217ENST00000566126 MBD3L1Q8WWY6 194 aa9.08□□□□□ -0.96
CLK3-217ENST00000566126 SMIM12Q96EX1 92 aa9.08□□□□□ -0.96
CLK3-217ENST00000566126 TRBV20OR9-2A0A075B6H5 130 aa9.07□□□□□ -0.96
CLK3-217ENST00000566126 VCYO14598 125 aa9.07□□□□□ -0.96
CLK3-217ENST00000566126 GNG4P50150 75 aa9.07□□□□□ -0.96
CLK3-217ENST00000566126 PRLHP81277 87 aa9.07□□□□□ -0.96
CLK3-217ENST00000566126 PNRC1Q12796 327 aaPredicted RBP9.07□□□□□ -0.96
CLK3-217ENST00000566126 CCL20P78556 96 aa9.06□□□□□ -0.96
CLK3-217ENST00000566126 PLEKHB2Q96CS7 222 aa9.06□□□□□ -0.96
CLK3-217ENST00000566126 KIR2DL4Q99706 377 aa9.06□□□□□ -0.96
CLK3-217ENST00000566126 TGIF2-C20orf24A0A0A6YYL0 155 aa9.05□□□□□ -0.96
CLK3-217ENST00000566126 RPL32P62910 135 aaKnown RBP9.05□□□□□ -0.96
CLK3-217ENST00000566126 Q8NBF4 154 aa9.05□□□□□ -0.96
CLK3-217ENST00000566126 IFITM10A6NMD0 228 aa9.04□□□□□ -0.96
CLK3-217ENST00000566126 RPL39P62891 51 aaKnown RBP9.04□□□□□ -0.96
CLK3-217ENST00000566126 IFITM3Q01628 133 aa9.03□□□□□ -0.96
CLK3-217ENST00000566126 NDUFA12Q9UI09 145 aa9.03□□□□□ -0.96
CLK3-217ENST00000566126 SPINK1P00995 79 aa9.02□□□□□ -0.97
CLK3-217ENST00000566126 FAM213BQ8TBF2 198 aa9.02□□□□□ -0.97
CLK3-217ENST00000566126 TMEM18Q96B42 140 aa9.02□□□□□ -0.97
CLK3-217ENST00000566126 BIN3Q9NQY0 253 aa9.02□□□□□ -0.97
CLK3-217ENST00000566126 SMKR1H3BMG3 65 aa9.01□□□□□ -0.97
CLK3-217ENST00000566126 RAB4AP20338 218 aa9.01□□□□□ -0.97
CLK3-217ENST00000566126 HBBP68871 147 aa9.01□□□□□ -0.97
CLK3-217ENST00000566126 SUMO2P61956 95 aaKnown RBP9□□□□□ -0.97
CLK3-217ENST00000566126 MRPS36P82909 103 aaKnown RBP9□□□□□ -0.97
CLK3-217ENST00000566126 Q8N377 158 aa9□□□□□ -0.97
CLK3-217ENST00000566126 COX6B2Q6YFQ2 88 aa8.99□□□□□ -0.97
CLK3-217ENST00000566126 NRACQ8N912 160 aa8.99□□□□□ -0.97
CLK3-217ENST00000566126 IGKV2-28A0A075B6P5 120 aa8.98□□□□□ -0.97
CLK3-217ENST00000566126 FXYD6-FXYD2A0A087WZ82 144 aa8.98□□□□□ -0.97
CLK3-217ENST00000566126 IGKV2D-28P01615 120 aa8.98□□□□□ -0.97
CLK3-217ENST00000566126 CKS1BP61024 79 aa8.98□□□□□ -0.97
CLK3-217ENST00000566126 FAM19A1Q7Z5A9 133 aa8.98□□□□□ -0.97
CLK3-217ENST00000566126 AMN1Q8IY45 258 aa8.98□□□□□ -0.97
CLK3-217ENST00000566126 TMEM191AQ9H0A3 160 aa8.98□□□□□ -0.97
CLK3-217ENST00000566126 SPANXA1Q9NS26 97 aa8.98□□□□□ -0.97
CLK3-217ENST00000566126 IGLV5-37A0A075B6J1 123 aa8.97□□□□□ -0.97
CLK3-217ENST00000566126 FAM19A2Q8N3H0 131 aa8.97□□□□□ -0.97
CLK3-217ENST00000566126 K7EN84 100 aa8.96□□□□□ -0.98
CLK3-217ENST00000566126 SCO1O75880 301 aa8.96□□□□□ -0.98
CLK3-217ENST00000566126 PRSS2P07478 247 aa8.96□□□□□ -0.98
CLK3-217ENST00000566126 LINC01561Q8N1V8 128 aa8.96□□□□□ -0.98
CLK3-217ENST00000566126 SPRR4Q96PI1 79 aa8.96□□□□□ -0.98
CLK3-217ENST00000566126 TOMM7Q9P0U1 55 aa8.96□□□□□ -0.98
CLK3-217ENST00000566126 GNG13Q9P2W3 67 aa8.96□□□□□ -0.98
CLK3-217ENST00000566126 H2AFB1P0C5Y9 115 aa8.95□□□□□ -0.98
CLK3-217ENST00000566126 CFC1P0CG37 223 aa8.95□□□□□ -0.98
CLK3-217ENST00000566126 MANBALQ9NQG1 85 aa8.95□□□□□ -0.98
CLK3-217ENST00000566126 CBLN2Q8IUK8 224 aa8.94□□□□□ -0.98
CLK3-217ENST00000566126 TMEM126AQ9H061 195 aa8.94□□□□□ -0.98
CLK3-217ENST00000566126 TMEM238C9JI98 176 aa8.93□□□□□ -0.98
CLK3-217ENST00000566126 C6orf226Q5I0X4 101 aa8.93□□□□□ -0.98
CLK3-217ENST00000566126 Q8IZM0 81 aa8.93□□□□□ -0.98
CLK3-217ENST00000566126 KRTAP9-8Q9BYQ0 159 aa8.93□□□□□ -0.98
CLK3-217ENST00000566126 UMAD1C9J7I0 102 aa8.92□□□□□ -0.98
CLK3-217ENST00000566126 NKAPP1Q8N9T2 125 aa8.92□□□□□ -0.98
CLK3-217ENST00000566126 GNB1LQ9BYB4 327 aa8.92□□□□□ -0.98
CLK3-217ENST00000566126 MED9Q9NWA0 146 aa8.92□□□□□ -0.98
CLK3-217ENST00000566126 PPP1R17O96001 155 aa8.91□□□□□ -0.98
CLK3-217ENST00000566126 RPS29P62273 56 aaKnown RBP8.91□□□□□ -0.98
CLK3-217ENST00000566126 OCC1Q8TAD7 63 aa8.91□□□□□ -0.98
CLK3-217ENST00000566126 F8VRH5 84 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms