RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 MOBPQ13875 183 aa3.15□□□□□ -1.9
SMG1-207ENST00000563235 MIR7-3HGQ8N6C7 128 aa3.15□□□□□ -1.9
SMG1-207ENST00000563235 MYOFQ9NZM1 2061 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 F8WEM9 126 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 H3BVH4 76 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 GIG44P09565 113 aaPredicted RBP3.15□□□□□ -1.91
SMG1-207ENST00000563235 CFC1P0CG37 223 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 EDDM3BP56851 147 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 NNATQ16517 81 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 PIGYQ3MUY2 71 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 Q5VV11 94 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 VMO1Q7Z5L0 202 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 Q8N6K4 173 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 ZNF355PQ9NSJ1 428 aa3.15□□□□□ -1.91
SMG1-207ENST00000563235 SPTBP11277 2137 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 IGKV3-11P04433 115 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 MUC7Q8TAX7 377 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 KRTAP4-5Q9BYR2 181 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 CCL26Q9Y258 94 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 ABCA2Q9BZC7 2435 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 ITPR3Q14573 2671 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 IGLV11-55A0A075B6I3 123 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 TRAV7A0A075B6U4 112 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 IGHV1-3A0A0C4DH29 117 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 TMEM30CPA0ZSE6 113 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 DNAH10OSP0CZ25 163 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 Q8N377 158 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 DEFB126Q9BYW3 111 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 FRYLO94915 3013 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 ESPL1Q14674 2120 aa3.14□□□□□ -1.91
SMG1-207ENST00000563235 DMXL2Q8TDJ6 3036 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 SDHAF1A6NFY7 115 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 PROP1O75360 226 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 MSMBP08118 114 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 Q6ZTC4 211 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 CDC42SE1Q9NRR8 79 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 STATHP02808 62 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 C10orf128Q5T292 105 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 TIMM21Q9BVV7 248 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 DOPEY2Q9Y3R5 2298 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 PCNX1Q96RV3 2341 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 HEATR1Q9H583 2144 aaKnown RBP3.13□□□□□ -1.91
SMG1-207ENST00000563235 CREBBPQ92793 2442 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 KALRNO60229 2985 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 DEFB134Q4QY38 66 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 FAM167A-AS1Q96KT0 104 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 C20orf166-AS1Q96NR2 134 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 PRO1854Q9UHT4 67 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 S4R3C0 116 aa3.13□□□□□ -1.91
SMG1-207ENST00000563235 MIR22HGQ0VDD5 57 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 LINC01560Q8TB33 94 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 F5P12259 2224 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.12□□□□□ -1.91
SMG1-207ENST00000563235 TRBV10-2A0A0K0K1G8 114 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 M0R135 149 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 MIFP14174 115 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 CASC2Q6XLA1 102 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 DYNAPQ8N1N2 210 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 CYP4F30PQ9H0H9 118 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 MINOS1-NBL1R4GNA1 71 aa3.12□□□□□ -1.91
SMG1-207ENST00000563235 C11orf86A6NJI1 115 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 LYZP61626 148 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 NDUFA11Q86Y39 141 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 TRAV12-1A0A0B4J245 112 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 A0A1B0GUT8 65 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 KRTAP9-7A8MTY7 169 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 IGHV4-34P06331 123 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 FCER1GP30273 86 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 IFI27P40305 119 aaPredicted RBP3.11□□□□□ -1.91
SMG1-207ENST00000563235 KLF14Q8TD94 323 aaPredicted RBP3.11□□□□□ -1.91
SMG1-207ENST00000563235 ZGRF1Q86YA3 2104 aa3.11□□□□□ -1.91
SMG1-207ENST00000563235 IGLV7-46A0A075B6I9 117 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 TRBV10-3A0A0K0K1G6 114 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 LINC01549A6NIU2 74 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 COX6B1P14854 86 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 CD24P25063 80 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 PLNP26678 52 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 LCE5AQ5TCM9 118 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 LINC00322Q6ZN03 302 aaPredicted RBP3.1□□□□□ -1.91
SMG1-207ENST00000563235 LINC00467Q9BRT7 94 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 DYNLRB1Q9NP97 96 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 ZFHX3Q15911 3703 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 H7C2G1 150 aa3.1□□□□□ -1.91
SMG1-207ENST00000563235 IGHV3-64DA0A0J9YX35 117 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 C16orf74Q96GX8 76 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 FAM215AQ9Y5M1 114 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 LOC400499M0QZD8 3231 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 URB1O60287 2271 aaKnown RBP3.09□□□□□ -1.91
SMG1-207ENST00000563235 CACNA1CQ13936 2221 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 ACACAQ13085 2346 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 H0YGG7 62 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 BCE1O60756 84 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 Q8TAT8 98 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 KRTAP3-1Q9BYR8 98 aa3.09□□□□□ -1.91
SMG1-207ENST00000563235 APC2O95996 2303 aa3.09□□□□□ -1.92
SMG1-207ENST00000563235 NF1P21359 2839 aa3.09□□□□□ -1.92
SMG1-207ENST00000563235 IGLV3-32A0A0A0MS00 114 aa3.09□□□□□ -1.92
SMG1-207ENST00000563235 BAALC-AS2P0C853 105 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms