RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 MYH6P13533 1939 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 EP300Q09472 2414 aaPredicted RBP0.56□□□□□ -2.32
LINC00557-201ENST00000563184 CEP250Q9BV73 2442 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 C5orf42Q9H799 3197 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 CD163L1Q9NR16 1453 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 XRN1Q8IZH2 1706 aaKnown RBP0.56□□□□□ -2.32
LINC00557-201ENST00000563184 ABCA3Q99758 1704 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 TNS1Q9HBL0 1735 aaKnown RBP0.56□□□□□ -2.32
LINC00557-201ENST00000563184 MYO5CQ9NQX4 1742 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 DNHD1Q96M86 4753 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 USP34Q70CQ2 3546 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 MTORP42345 2549 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 SPAARA0A1B0GVQ0 90 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 HCG22E2RYF7 251 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 FXYD1O00168 92 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 UBE2D1P51668 147 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 ZNF137PP52743 207 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 ATP5EP56381 51 aaPredicted RBP0.56□□□□□ -2.32
LINC00557-201ENST00000563184 C9orf153Q5TBE3 101 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 COMMD6Q7Z4G1 85 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 SPTSSBQ8NFR3 76 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 MYOZ3Q8TDC0 251 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 LSM10Q969L4 123 aaKnown RBP0.56□□□□□ -2.32
LINC00557-201ENST00000563184 SMR3AQ99954 134 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 FAM186AA6NE01 2351 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 PAPPAQ13219 1627 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 FLNCQ14315 2725 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 ATG2AQ2TAZ0 1938 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 TNRC6CQ9HCJ0 1690 aaKnown RBP0.56□□□□□ -2.32
LINC00557-201ENST00000563184 LRRK2Q5S007 2527 aa0.56□□□□□ -2.32
LINC00557-201ENST00000563184 MYH9P35579 1960 aaKnown RBP0.56□□□□□ -2.32
LINC00557-201ENST00000563184 SMG1Q96Q15 3661 aaKnown RBP0.56□□□□□ -2.32
LINC00557-201ENST00000563184 HTTP42858 3142 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 VPS8Q8N3P4 1428 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 SETD2Q9BYW2 2564 aaPredicted RBP0.55□□□□□ -2.32
LINC00557-201ENST00000563184 NUP188Q5SRE5 1749 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 SUPT6HQ7KZ85 1726 aaKnown RBP0.55□□□□□ -2.32
LINC00557-201ENST00000563184 PARP4Q9UKK3 1724 aaKnown RBP0.55□□□□□ -2.32
LINC00557-201ENST00000563184 ITPR3Q14573 2671 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 ZZEF1O43149 2961 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 KALRNO60229 2985 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 TRIOO75962 3097 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 PRUNE2Q8WUY3 3088 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 PIEZO2Q9H5I5 2752 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 DOPEY1Q5JWR5 2465 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 ANK1P16157 1881 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 SSC5DA1L4H1 1573 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 UBE2L5PA0A1B0GUS4 154 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 LOC285095A0A1B0GVY8 99 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 TMEM218A2RU14 115 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 TMEM262E9PQX1 116 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 ATP6V1G2-DDX39BF2Z307 99 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 RBP2P50120 134 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 EDDM3BP56851 147 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 UBE2L3P68036 154 aaKnown RBP0.55□□□□□ -2.32
LINC00557-201ENST00000563184 RBM3P98179 157 aaKnown RBP0.55□□□□□ -2.32
LINC00557-201ENST00000563184 HSD52Q0P140 79 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 S100A7L2Q5SY68 101 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 C10orf128Q5T292 105 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 C6orf52Q5T4I8 152 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 Q5VV11 94 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 C14orf144Q96I85 54 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 C12orf57Q99622 126 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 DPH3P1Q9H4G8 78 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 LINC00312Q9Y6C7 94 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 R4GMQ9 66 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 DSPP15924 2871 aaKnown RBP0.55□□□□□ -2.32
LINC00557-201ENST00000563184 LRRC37A3O60309 1634 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 TEP1Q99973 2627 aaKnown RBP0.55□□□□□ -2.32
LINC00557-201ENST00000563184 HECTD1Q9ULT8 2610 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 NBEAL1Q6ZS30 2694 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 CFAP46Q8IYW2 2715 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 QSER1Q2KHR3 1735 aa0.55□□□□□ -2.32
LINC00557-201ENST00000563184 CPSF1Q10570 1443 aaKnown RBP0.55□□□□□ -2.32
LINC00557-201ENST00000563184 DMDP11532 3685 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 MRC1P22897 1456 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 ZFHX3Q15911 3703 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 AKAP11Q9UKA4 1901 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 CACNA1EQ15878 2313 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 NF1P21359 2839 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 CREBBPQ92793 2442 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 CLTCL1P53675 1640 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 IQGAP3Q86VI3 1631 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 TRAV30A0A087WSZ9 112 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 F2Z2F3 143 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 KRTAP2-3P0C7H8 128 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 KRTDAPP60985 99 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 RPL37P61927 97 aaKnown RBP0.54□□□□□ -2.32
LINC00557-201ENST00000563184 BAGE3Q86Y29 109 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 TTC9CQ8N5M4 171 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 C10orf82Q8WW14 230 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 AMELXQ99217 191 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 WFDC6Q9BQY6 131 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 KRTAP2-4Q9BYR9 128 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 KRTAP2-1Q9BYU5 128 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 BPESC1Q9GZL8 116 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 LENEPQ9Y5L5 61 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 POLQO75417 2590 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 LRRIQ1Q96JM4 1722 aa0.54□□□□□ -2.32
LINC00557-201ENST00000563184 MARF1Q9Y4F3 1742 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms