RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 CD164L2Q6UWJ8 174 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 F8P00451 2351 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 NHLRC4P0CG21 123 aaPredicted RBP5.51□□□□□ -1.53
TCF4-216ENST00000562680 P0DMU3 169 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 FAM231AP0DMU4 169 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 FAM231CP0DMU5 169 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 XCL1P47992 114 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 NRACQ8N912 160 aa5.51□□□□□ -1.53
TCF4-216ENST00000562680 IGKV2D-24A0A075B6R9 120 aa5.5□□□□□ -1.53
TCF4-216ENST00000562680 IGHV4-30-4P0DP06 118 aa5.5□□□□□ -1.53
TCF4-216ENST00000562680 LAMA3Q16787 3333 aa5.5□□□□□ -1.53
TCF4-216ENST00000562680 TRAV13-2A0A0B4J235 113 aa5.5□□□□□ -1.53
TCF4-216ENST00000562680 A8MZ25 164 aa5.5□□□□□ -1.53
TCF4-216ENST00000562680 DEFB4AO15263 64 aa5.5□□□□□ -1.53
TCF4-216ENST00000562680 LINC00336Q6ZUF6 198 aa5.5□□□□□ -1.53
TCF4-216ENST00000562680 DEFB131BA0A096LNP1 70 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 RNASE13Q5GAN3 156 aaKnown RBP5.49□□□□□ -1.53
TCF4-216ENST00000562680 TTTY13Q9BZ97 58 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 FLNBO75369 2602 aaKnown RBP5.49□□□□□ -1.53
TCF4-216ENST00000562680 NACAE9PAV3 2078 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 SDIM1Q6ZPB5 146 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 Q9H8V8 135 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 TRBV6-8A0A0A6YYG3 113 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 WFDC10AQ9H1F0 79 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 IGHV1-58A0A0C4DH39 117 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 PLAC8L1A1L4L8 177 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 COX7B2Q8TF08 81 aa5.49□□□□□ -1.53
TCF4-216ENST00000562680 CDK2AP2O75956 126 aa5.48□□□□□ -1.53
TCF4-216ENST00000562680 UBE2AP49459 152 aa5.48□□□□□ -1.53
TCF4-216ENST00000562680 C1orf158Q8N1D5 194 aa5.48□□□□□ -1.53
TCF4-216ENST00000562680 C5orf38Q86SI9 138 aa5.48□□□□□ -1.53
TCF4-216ENST00000562680 USP24Q9UPU5 2620 aa5.48□□□□□ -1.53
TCF4-216ENST00000562680 KRTAP1-3Q8IUG1 177 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 NKAPP1Q8N9T2 125 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 CHCHD7Q9BUK0 85 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 BPTFQ12830 3046 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 NDUFA1O15239 70 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 CLPSL2Q6UWE3 100 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 FAM19A4Q96LR4 140 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 HECTD1Q9ULT8 2610 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 IGLV4-3A0A075B6K6 122 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 HAMPP81172 84 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 TRAV23DV6A0A075B6W5 121 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 C14orf177Q52M58 125 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 IGHV3-30P01768 117 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 IGHV3-33P01772 117 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 IGHV3-30-3P0DP02 117 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 IGHV3-30-5P0DP03 117 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 UBE2D3P61077 147 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 UBE2D2P62837 147 aa5.47□□□□□ -1.53
TCF4-216ENST00000562680 TSHBP01222 138 aa5.46□□□□□ -1.53
TCF4-216ENST00000562680 LELP1Q5T871 98 aa5.46□□□□□ -1.53
TCF4-216ENST00000562680 CAMK2N2Q96S95 79 aa5.46□□□□□ -1.53
TCF4-216ENST00000562680 KLK12Q9UKR0 248 aa5.46□□□□□ -1.53
TCF4-216ENST00000562680 HIST2H2BDQ6DRA6 164 aa5.46□□□□□ -1.54
TCF4-216ENST00000562680 H3BS24 57 aa5.45□□□□□ -1.54
TCF4-216ENST00000562680 SPAG11BQ08648 103 aa5.45□□□□□ -1.54
TCF4-216ENST00000562680 HELZ2Q9BYK8 2649 aaKnown RBP5.45□□□□□ -1.54
TCF4-216ENST00000562680 LINC01561Q8N1V8 128 aa5.45□□□□□ -1.54
TCF4-216ENST00000562680 Q9HAA7 133 aa5.45□□□□□ -1.54
TCF4-216ENST00000562680 PRO0461Q9UI25 63 aa5.45□□□□□ -1.54
TCF4-216ENST00000562680 TRBV7-6A0A0J9YX20 115 aa5.45□□□□□ -1.54
TCF4-216ENST00000562680 REG3AQ06141 175 aa5.45□□□□□ -1.54
TCF4-216ENST00000562680 Q6JHZ5 121 aa5.44□□□□□ -1.54
TCF4-216ENST00000562680 WFDC9Q8NEX5 89 aa5.44□□□□□ -1.54
TCF4-216ENST00000562680 MIAQ16674 131 aa5.44□□□□□ -1.54
TCF4-216ENST00000562680 TRBV30A0A0K0K1B3 111 aa5.44□□□□□ -1.54
TCF4-216ENST00000562680 A0A0J9YXY3 114 aa5.43□□□□□ -1.54
TCF4-216ENST00000562680 KPRPQ5T749 579 aaPredicted RBP5.43□□□□□ -1.54
TCF4-216ENST00000562680 SOSTDC1Q6X4U4 206 aa5.43□□□□□ -1.54
TCF4-216ENST00000562680 IGLV10-54A0A075B6I4 117 aa5.43□□□□□ -1.54
TCF4-216ENST00000562680 ZNF22P17026 224 aaPredicted RBP5.43□□□□□ -1.54
TCF4-216ENST00000562680 KRTAP24-1Q3LI83 254 aa5.43□□□□□ -1.54
TCF4-216ENST00000562680 DAND5Q8N907 189 aa5.43□□□□□ -1.54
TCF4-216ENST00000562680 UPK3BQ9BT76 320 aa5.43□□□□□ -1.54
TCF4-216ENST00000562680 CLEC2BQ92478 149 aa5.43□□□□□ -1.54
TCF4-216ENST00000562680 BRCA2P51587 3418 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 A8MTW9 85 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 MUC7Q8TAX7 377 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 UBE2D4Q9Y2X8 147 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 AGRNO00468 2067 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 KRTAP1-1Q07627 177 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 LINC00269Q8N2A0 174 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 CHCHD10Q8WYQ3 142 aaPredicted RBP5.42□□□□□ -1.54
TCF4-216ENST00000562680 OPRPNQ99935 248 aaPredicted RBP5.42□□□□□ -1.54
TCF4-216ENST00000562680 TMEM223A0PJW6 202 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 H0YGX0 51 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 TMEM256-PLSCR3K7ERE1 68 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 SND1-IT1Q9HBX3 110 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 ORMDL1Q9P0S3 153 aa5.42□□□□□ -1.54
TCF4-216ENST00000562680 TRAV7A0A075B6U4 112 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 CEMP1Q6PRD7 247 aaPredicted RBP5.41□□□□□ -1.54
TCF4-216ENST00000562680 IGKV2D-26A0A0A0MRZ7 120 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 H3BQ85 93 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 C11orf72Q8NBR9 251 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 CDKN2A-AS1Q9UH64 79 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 KIF25-AS1Q9Y6Z4 181 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 IGIPA6NJ69 53 aa5.41□□□□□ -1.54
TCF4-216ENST00000562680 CXCL6P80162 114 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms