RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 USP17L23D6RBM5 183 aa11.72□□□□□ -0.53
TPM1-228ENST00000560975 Q6JHZ5 121 aa11.72□□□□□ -0.53
TPM1-228ENST00000560975 DPH3Q96FX2 82 aa11.72□□□□□ -0.53
TPM1-228ENST00000560975 PF4P02776 101 aa11.71□□□□□ -0.53
TPM1-228ENST00000560975 RPL36AP83881 106 aaKnown RBP11.71□□□□□ -0.53
TPM1-228ENST00000560975 RPL36ALQ969Q0 106 aaKnown RBP11.71□□□□□ -0.53
TPM1-228ENST00000560975 PFN2P35080 140 aa11.7□□□□□ -0.54
TPM1-228ENST00000560975 RPS28P62857 69 aaKnown RBP11.7□□□□□ -0.54
TPM1-228ENST00000560975 COX7B2Q8TF08 81 aa11.7□□□□□ -0.54
TPM1-228ENST00000560975 INSP01308 110 aa11.7□□□□□ -0.54
TPM1-228ENST00000560975 UBE2L6O14933 153 aa11.69□□□□□ -0.54
TPM1-228ENST00000560975 OXTP01178 125 aa11.69□□□□□ -0.54
TPM1-228ENST00000560975 CCL18P55774 89 aa11.69□□□□□ -0.54
TPM1-228ENST00000560975 FAM19A3Q7Z5A8 133 aa11.69□□□□□ -0.54
TPM1-228ENST00000560975 MAP6D1Q9H9H5 199 aa11.69□□□□□ -0.54
TPM1-228ENST00000560975 NCOR2Q9Y618 2525 aa11.69□□□□□ -0.54
TPM1-228ENST00000560975 WFDC9Q8NEX5 89 aa11.69□□□□□ -0.54
TPM1-228ENST00000560975 UPK3BQ9BT76 320 aa11.69□□□□□ -0.54
TPM1-228ENST00000560975 USP9YO00507 2555 aaPredicted RBP11.69□□□□□ -0.54
TPM1-228ENST00000560975 OVOL2Q9BRP0 275 aa11.69□□□□□ -0.54
TPM1-228ENST00000560975 ZANQ9Y493 2812 aa11.68□□□□□ -0.54
TPM1-228ENST00000560975 HILS1P60008 231 aa11.68□□□□□ -0.54
TPM1-228ENST00000560975 TMEM258P61165 79 aa11.68□□□□□ -0.54
TPM1-228ENST00000560975 CCL19Q99731 98 aa11.68□□□□□ -0.54
TPM1-228ENST00000560975 PAX4O43316 350 aa11.68□□□□□ -0.54
TPM1-228ENST00000560975 WNK1Q9H4A3 2382 aa11.68□□□□□ -0.54
TPM1-228ENST00000560975 A8MTW9 85 aa11.67□□□□□ -0.54
TPM1-228ENST00000560975 K7EQD1 137 aa11.67□□□□□ -0.54
TPM1-228ENST00000560975 Q6ZTI0 123 aa11.67□□□□□ -0.54
TPM1-228ENST00000560975 C11orf68Q9H3H3 251 aaKnown RBP11.67□□□□□ -0.54
TPM1-228ENST00000560975 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
TPM1-228ENST00000560975 H0YGX0 51 aa11.66□□□□□ -0.54
TPM1-228ENST00000560975 C4orf26Q17RF5 130 aa11.65□□□□□ -0.54
TPM1-228ENST00000560975 KHDC1LQ5JSQ8 128 aa11.65□□□□□ -0.54
TPM1-228ENST00000560975 OBSCN-AS1Q96MR7 158 aa11.65□□□□□ -0.54
TPM1-228ENST00000560975 CHD8Q9HCK8 2581 aa11.65□□□□□ -0.54
TPM1-228ENST00000560975 UCNP55089 124 aa11.65□□□□□ -0.55
TPM1-228ENST00000560975 DYNLRB2Q8TF09 96 aa11.65□□□□□ -0.55
TPM1-228ENST00000560975 TMEM243Q9BU79 118 aa11.65□□□□□ -0.55
TPM1-228ENST00000560975 LOC100131303A0A0U1RQF7 123 aa11.64□□□□□ -0.55
TPM1-228ENST00000560975 TRAV23DV6A0A075B6W5 121 aa11.63□□□□□ -0.55
TPM1-228ENST00000560975 MAPK1IP1LQ8NDC0 245 aa11.63□□□□□ -0.55
TPM1-228ENST00000560975 B4DSR2 109 aa11.62□□□□□ -0.55
TPM1-228ENST00000560975 C1orf158Q8N1D5 194 aa11.62□□□□□ -0.55
TPM1-228ENST00000560975 FHL2Q14192 279 aa11.61□□□□□ -0.55
TPM1-228ENST00000560975 HRCT1Q6UXD1 115 aa11.61□□□□□ -0.55
TPM1-228ENST00000560975 ORMDL1Q9P0S3 153 aa11.61□□□□□ -0.55
TPM1-228ENST00000560975 GHRHP01286 108 aa11.61□□□□□ -0.55
TPM1-228ENST00000560975 SS18Q15532 418 aa11.61□□□□□ -0.55
TPM1-228ENST00000560975 MXRA5Q9NR99 2828 aa11.6□□□□□ -0.55
TPM1-228ENST00000560975 FAM19A1Q7Z5A9 133 aa11.6□□□□□ -0.55
TPM1-228ENST00000560975 NOP10Q9NPE3 64 aaKnown RBP11.6□□□□□ -0.55
TPM1-228ENST00000560975 JMJD1CQ15652 2540 aa11.6□□□□□ -0.55
TPM1-228ENST00000560975 TRBV10-1A0A0K0K1A3 114 aa11.6□□□□□ -0.55
TPM1-228ENST00000560975 ZNF702PQ9H963 129 aa11.6□□□□□ -0.55
TPM1-228ENST00000560975 USP9XQ93008 2570 aaPredicted RBP11.59□□□□□ -0.55
TPM1-228ENST00000560975 IGLV4-60A0A075B6I1 120 aa11.59□□□□□ -0.55
TPM1-228ENST00000560975 RNASE1P07998 156 aaKnown RBP11.59□□□□□ -0.55
TPM1-228ENST00000560975 CCKP06307 115 aa11.59□□□□□ -0.55
TPM1-228ENST00000560975 CHD6Q8TD26 2715 aa11.59□□□□□ -0.55
TPM1-228ENST00000560975 GNLYP22749 145 aa11.58□□□□□ -0.56
TPM1-228ENST00000560975 ENHOQ6UWT2 76 aa11.58□□□□□ -0.56
TPM1-228ENST00000560975 STHQ8IWL8 128 aa11.58□□□□□ -0.56
TPM1-228ENST00000560975 POLQO75417 2590 aa11.57□□□□□ -0.56
TPM1-228ENST00000560975 ITPR1Q14643 2758 aa11.57□□□□□ -0.56
TPM1-228ENST00000560975 PRR3P79522 188 aaKnown RBP11.57□□□□□ -0.56
TPM1-228ENST00000560975 NBL1P41271 181 aa11.57□□□□□ -0.56
TPM1-228ENST00000560975 IBA57-AS1B1ANH7 110 aa11.56□□□□□ -0.56
TPM1-228ENST00000560975 DEFB114Q30KQ6 69 aa11.56□□□□□ -0.56
TPM1-228ENST00000560975 TLN2Q9Y4G6 2542 aa11.56□□□□□ -0.56
TPM1-228ENST00000560975 ODF3L2Q3SX64 289 aa11.56□□□□□ -0.56
TPM1-228ENST00000560975 TRBV6-4A0A1B0GX49 114 aa11.55□□□□□ -0.56
TPM1-228ENST00000560975 Q5XG85 94 aa11.55□□□□□ -0.56
TPM1-228ENST00000560975 C20orf197Q8N268 126 aa11.55□□□□□ -0.56
TPM1-228ENST00000560975 TRGV2A0A075B6R0 118 aa11.55□□□□□ -0.56
TPM1-228ENST00000560975 IGHV3OR16-9A0A0B4J2B5 98 aa11.55□□□□□ -0.56
TPM1-228ENST00000560975 SPTBN4Q9H254 2564 aa11.55□□□□□ -0.56
TPM1-228ENST00000560975 C6orf226Q5I0X4 101 aa11.54□□□□□ -0.56
TPM1-228ENST00000560975 IL17DQ8TAD2 202 aa11.54□□□□□ -0.56
TPM1-228ENST00000560975 UTP20O75691 2785 aaKnown RBP11.54□□□□□ -0.56
TPM1-228ENST00000560975 AKAP9Q99996 3911 aa11.53□□□□□ -0.56
TPM1-228ENST00000560975 PLA2G2AP14555 144 aa11.53□□□□□ -0.56
TPM1-228ENST00000560975 FBN2P35556 2912 aa11.52□□□□□ -0.57
TPM1-228ENST00000560975 TRAV25A0A0B4J276 109 aa11.51□□□□□ -0.57
TPM1-228ENST00000560975 S100A7L2Q5SY68 101 aa11.51□□□□□ -0.57
TPM1-228ENST00000560975 A0A087WZ39 114 aa11.5□□□□□ -0.57
TPM1-228ENST00000560975 CENPEQ02224 2701 aa11.5□□□□□ -0.57
TPM1-228ENST00000560975 SETD2Q9BYW2 2564 aaPredicted RBP11.5□□□□□ -0.57
TPM1-228ENST00000560975 NBPF19A0A087WUL8 3843 aa11.5□□□□□ -0.57
TPM1-228ENST00000560975 TRGV4A0A0C4DH28 118 aa11.5□□□□□ -0.57
TPM1-228ENST00000560975 XCL1P47992 114 aa11.5□□□□□ -0.57
TPM1-228ENST00000560975 Q8N814 137 aa11.5□□□□□ -0.57
TPM1-228ENST00000560975 C11orf44Q8N8P7 122 aa11.5□□□□□ -0.57
TPM1-228ENST00000560975 JMJD7-PLA2G4BH0Y9G9 81 aa11.49□□□□□ -0.57
TPM1-228ENST00000560975 WIPF1O43516 503 aa11.49□□□□□ -0.57
TPM1-228ENST00000560975 LY6G6DO95868 133 aa11.49□□□□□ -0.57
TPM1-228ENST00000560975 FLNCQ14315 2725 aa11.49□□□□□ -0.57
TPM1-228ENST00000560975 CLPSL2Q6UWE3 100 aa11.49□□□□□ -0.57
TPM1-228ENST00000560975 LINC01356Q8N9X3 169 aa11.49□□□□□ -0.57
TPM1-228ENST00000560975 NIPBLQ6KC79 2804 aaeCLIP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms