RNA–Protein interactions for RNA: ENST00000559240.5

PBX1-215, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 2,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-215ENST00000559240 FAM231AP0DMU4 169 aa11.78□□□□□ -0.52
PBX1-215ENST00000559240 FAM231CP0DMU5 169 aa11.78□□□□□ -0.52
PBX1-215ENST00000559240 LAGE3Q14657 143 aa11.78□□□□□ -0.52
PBX1-215ENST00000559240 RBMY1FQ15415 496 aaKnown RBP11.78□□□□□ -0.52
PBX1-215ENST00000559240 IGHV4-4A0A075B6R2 117 aa11.77□□□□□ -0.52
PBX1-215ENST00000559240 TMEM263Q8WUH6 116 aaKnown RBP11.77□□□□□ -0.52
PBX1-215ENST00000559240 CLEC2BQ92478 149 aa11.77□□□□□ -0.52
PBX1-215ENST00000559240 TRAV12-2A0A075B6T6 113 aa11.77□□□□□ -0.53
PBX1-215ENST00000559240 LINC01546A6NGU7 62 aa11.77□□□□□ -0.53
PBX1-215ENST00000559240 NEXN-AS1Q8NBZ9 246 aa11.77□□□□□ -0.53
PBX1-215ENST00000559240 BRK1Q8WUW1 75 aa11.77□□□□□ -0.53
PBX1-215ENST00000559240 DNAH3Q8TD57 4116 aa11.77□□□□□ -0.53
PBX1-215ENST00000559240 ATOX1O00244 68 aa11.76□□□□□ -0.53
PBX1-215ENST00000559240 APOC4P55056 127 aa11.76□□□□□ -0.53
PBX1-215ENST00000559240 LINC00643Q86TS7 51 aa11.76□□□□□ -0.53
PBX1-215ENST00000559240 C1orf158Q8N1D5 194 aa11.76□□□□□ -0.53
PBX1-215ENST00000559240 NACAE9PAV3 2078 aa11.76□□□□□ -0.53
PBX1-215ENST00000559240 IGLV2-18A0A075B6J9 118 aa11.75□□□□□ -0.53
PBX1-215ENST00000559240 NXPH4O95158 308 aa11.75□□□□□ -0.53
PBX1-215ENST00000559240 SCGB3A1Q96QR1 104 aa11.75□□□□□ -0.53
PBX1-215ENST00000559240 TSPEAR-AS2P59090 65 aa11.74□□□□□ -0.53
PBX1-215ENST00000559240 PIK3CD-AS1Q5SR53 167 aa11.74□□□□□ -0.53
PBX1-215ENST00000559240 TRRAPQ9Y4A5 3859 aa11.74□□□□□ -0.53
PBX1-215ENST00000559240 IGHV3-16A0A0C4DH30 117 aa11.74□□□□□ -0.53
PBX1-215ENST00000559240 UPK3BQ9BT76 320 aa11.74□□□□□ -0.53
PBX1-215ENST00000559240 SORL1Q92673 2214 aa11.74□□□□□ -0.53
PBX1-215ENST00000559240 IGHV4-30-4P0DP06 118 aa11.73□□□□□ -0.53
PBX1-215ENST00000559240 TRAV8-3A0A0A6YYJ7 113 aa11.73□□□□□ -0.53
PBX1-215ENST00000559240 RNASE3P12724 160 aaKnown RBP11.73□□□□□ -0.53
PBX1-215ENST00000559240 C5orf38Q86SI9 138 aa11.73□□□□□ -0.53
PBX1-215ENST00000559240 SLC25A29Q8N8R3 303 aa11.73□□□□□ -0.53
PBX1-215ENST00000559240 XCL2Q9UBD3 114 aa11.73□□□□□ -0.53
PBX1-215ENST00000559240 NRACQ8N912 160 aa11.73□□□□□ -0.53
PBX1-215ENST00000559240 SDIM1Q6ZPB5 146 aa11.72□□□□□ -0.53
PBX1-215ENST00000559240 H3BT86 120 aa11.71□□□□□ -0.53
PBX1-215ENST00000559240 TRAV12-1A0A0B4J245 112 aa11.71□□□□□ -0.54
PBX1-215ENST00000559240 A0A0U1RRA0 63 aa11.71□□□□□ -0.54
PBX1-215ENST00000559240 GNRH2O43555 120 aa11.7□□□□□ -0.54
PBX1-215ENST00000559240 FHL2Q14192 279 aa11.7□□□□□ -0.54
PBX1-215ENST00000559240 DEFB121Q5J5C9 76 aa11.7□□□□□ -0.54
PBX1-215ENST00000559240 MUSTN1Q8IVN3 82 aa11.7□□□□□ -0.54
PBX1-215ENST00000559240 C11orf72Q8NBR9 251 aa11.7□□□□□ -0.54
PBX1-215ENST00000559240 LINC01600Q96MT4 127 aa11.7□□□□□ -0.54
PBX1-215ENST00000559240 PRSS2P07478 247 aa11.7□□□□□ -0.54
PBX1-215ENST00000559240 DEFB104AQ8WTQ1 72 aa11.69□□□□□ -0.54
PBX1-215ENST00000559240 SERP2Q8N6R1 65 aa11.69□□□□□ -0.54
PBX1-215ENST00000559240 TP53TG1Q9Y2A0 90 aa11.69□□□□□ -0.54
PBX1-215ENST00000559240 A0A087WVE0 104 aa11.69□□□□□ -0.54
PBX1-215ENST00000559240 RPL18AQ02543 176 aaKnown RBP11.69□□□□□ -0.54
PBX1-215ENST00000559240 RETNQ9HD89 108 aa11.69□□□□□ -0.54
PBX1-215ENST00000559240 C11orf86A6NJI1 115 aa11.68□□□□□ -0.54
PBX1-215ENST00000559240 S100A4P26447 101 aaKnown RBP11.68□□□□□ -0.54
PBX1-215ENST00000559240 HIST1H4AP62805 103 aaKnown RBP11.68□□□□□ -0.54
PBX1-215ENST00000559240 NPC2P61916 151 aa11.68□□□□□ -0.54
PBX1-215ENST00000559240 C16orf74Q96GX8 76 aa11.68□□□□□ -0.54
PBX1-215ENST00000559240 SPANXDQ9BXN6 97 aa11.68□□□□□ -0.54
PBX1-215ENST00000559240 TMEM223A0PJW6 202 aa11.66□□□□□ -0.54
PBX1-215ENST00000559240 ACYP1P07311 99 aa11.66□□□□□ -0.54
PBX1-215ENST00000559240 A0A0B4J2C4 111 aa11.66□□□□□ -0.54
PBX1-215ENST00000559240 TRBV30A0A0K0K1B3 111 aa11.66□□□□□ -0.54
PBX1-215ENST00000559240 CXCL5P42830 114 aa11.66□□□□□ -0.54
PBX1-215ENST00000559240 ICOSQ9Y6W8 199 aa11.66□□□□□ -0.54
PBX1-215ENST00000559240 DAZ2Q13117 558 aaKnown RBP11.65□□□□□ -0.54
PBX1-215ENST00000559240 PHLDA3Q9Y5J5 127 aa11.65□□□□□ -0.54
PBX1-215ENST00000559240 IGKV3D-7A0A0C4DH55 119 aa11.65□□□□□ -0.54
PBX1-215ENST00000559240 X6R8D5 127 aa11.65□□□□□ -0.54
PBX1-215ENST00000559240 OVOL2Q9BRP0 275 aa11.65□□□□□ -0.55
PBX1-215ENST00000559240 PLAC8L1A1L4L8 177 aa11.64□□□□□ -0.55
PBX1-215ENST00000559240 IGHV3-64A0A075B6Q5 118 aa11.64□□□□□ -0.55
PBX1-215ENST00000559240 SPANXN1Q5VSR9 72 aa11.63□□□□□ -0.55
PBX1-215ENST00000559240 K7EIL1 84 aa11.62□□□□□ -0.55
PBX1-215ENST00000559240 TMEM243Q9BU79 118 aa11.62□□□□□ -0.55
PBX1-215ENST00000559240 PKD1L1Q8TDX9 2849 aa11.62□□□□□ -0.55
PBX1-215ENST00000559240 MIFP14174 115 aa11.61□□□□□ -0.55
PBX1-215ENST00000559240 FP248Q71RG6 208 aaPredicted RBP11.61□□□□□ -0.55
PBX1-215ENST00000559240 KIF25-AS1Q9Y6Z4 181 aa11.61□□□□□ -0.55
PBX1-215ENST00000559240 COX6CP09669 75 aa11.61□□□□□ -0.55
PBX1-215ENST00000559240 LGALS3P17931 250 aaKnown RBP11.61□□□□□ -0.55
PBX1-215ENST00000559240 LINC00612Q8N6U2 182 aa11.61□□□□□ -0.55
PBX1-215ENST00000559240 AMELXQ99217 191 aa11.61□□□□□ -0.55
PBX1-215ENST00000559240 LST1O00453 97 aa11.6□□□□□ -0.55
PBX1-215ENST00000559240 SS18Q15532 418 aa11.6□□□□□ -0.55
PBX1-215ENST00000559240 C2orf66Q6UXQ4 117 aa11.6□□□□□ -0.55
PBX1-215ENST00000559240 TIMM21Q9BVV7 248 aa11.6□□□□□ -0.55
PBX1-215ENST00000559240 MUC4Q99102 2169 aa11.6□□□□□ -0.55
PBX1-215ENST00000559240 TOMM6Q96B49 74 aa11.6□□□□□ -0.55
PBX1-215ENST00000559240 NOTCH3Q9UM47 2321 aa11.59□□□□□ -0.55
PBX1-215ENST00000559240 IGLV4-69A0A075B6H9 119 aa11.59□□□□□ -0.55
PBX1-215ENST00000559240 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.59□□□□□ -0.55
PBX1-215ENST00000559240 LINC00474Q9P2X8 69 aa11.59□□□□□ -0.55
PBX1-215ENST00000559240 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
PBX1-215ENST00000559240 DEFB135Q30KP9 77 aa11.58□□□□□ -0.56
PBX1-215ENST00000559240 USP17L23D6RBM5 183 aa11.58□□□□□ -0.56
PBX1-215ENST00000559240 M0R381 172 aa11.58□□□□□ -0.56
PBX1-215ENST00000559240 ZNF876PQ49A33 203 aa11.58□□□□□ -0.56
PBX1-215ENST00000559240 DAZ4Q86SG3 579 aaKnown RBP11.58□□□□□ -0.56
PBX1-215ENST00000559240 SMIM2Q9BVW6 85 aa11.58□□□□□ -0.56
PBX1-215ENST00000559240 I3L3M4 83 aa11.57□□□□□ -0.56
PBX1-215ENST00000559240 LINC00315P59091 139 aa11.57□□□□□ -0.56
PBX1-215ENST00000559240 Q8NAQ8 132 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 134.7 ms