RNA–Protein interactions for RNA: ENST00000559043.1

CDC42BPB-204, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 5

Gene CDC42BPB, Length 1,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-204ENST00000559043 CSMD3Q7Z407 3707 aa11.04□□□□□ -0.64
CDC42BPB-204ENST00000559043 IGLV5-45A0A087WSX0 123 aa11.04□□□□□ -0.64
CDC42BPB-204ENST00000559043 HTN3P15516 51 aa11.04□□□□□ -0.64
CDC42BPB-204ENST00000559043 TIRAPP58753 221 aa11.04□□□□□ -0.64
CDC42BPB-204ENST00000559043 VSIG2Q96IQ7 327 aa11.04□□□□□ -0.64
CDC42BPB-204ENST00000559043 CBY1Q9Y3M2 126 aa11.04□□□□□ -0.64
CDC42BPB-204ENST00000559043 TRAV8-3A0A0A6YYJ7 113 aa11.03□□□□□ -0.64
CDC42BPB-204ENST00000559043 A0A0J9YXY3 114 aa11.03□□□□□ -0.64
CDC42BPB-204ENST00000559043 TRBV6-4A0A1B0GX49 114 aa11.03□□□□□ -0.64
CDC42BPB-204ENST00000559043 K7ERU9 68 aa11.03□□□□□ -0.64
CDC42BPB-204ENST00000559043 ATP5G1P05496 136 aa11.03□□□□□ -0.64
CDC42BPB-204ENST00000559043 CFC1BP0CG36 223 aa11.03□□□□□ -0.64
CDC42BPB-204ENST00000559043 CFC1P0CG37 223 aa11.03□□□□□ -0.64
CDC42BPB-204ENST00000559043 DGAT2L7PQ6IED9 249 aa11.03□□□□□ -0.64
CDC42BPB-204ENST00000559043 FAM19A3Q7Z5A8 133 aa11.03□□□□□ -0.64
CDC42BPB-204ENST00000559043 TMEM238C9JI98 176 aa11.02□□□□□ -0.65
CDC42BPB-204ENST00000559043 TSPAN13O95857 204 aa11.02□□□□□ -0.65
CDC42BPB-204ENST00000559043 LINC00694P0DN24 101 aa11.02□□□□□ -0.65
CDC42BPB-204ENST00000559043 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
CDC42BPB-204ENST00000559043 GAGE12JA6NER3 117 aa11.01□□□□□ -0.65
CDC42BPB-204ENST00000559043 APOMO95445 188 aa11.01□□□□□ -0.65
CDC42BPB-204ENST00000559043 GAGE4Q13068 117 aa11.01□□□□□ -0.65
CDC42BPB-204ENST00000559043 GAGE5Q13069 117 aa11.01□□□□□ -0.65
CDC42BPB-204ENST00000559043 GAGE13Q4V321 117 aa11.01□□□□□ -0.65
CDC42BPB-204ENST00000559043 GEMIN7Q9H840 131 aaKnown RBP11.01□□□□□ -0.65
CDC42BPB-204ENST00000559043 F5H768 121 aa11.01□□□□□ -0.65
CDC42BPB-204ENST00000559043 F8W1H4 67 aa11.01□□□□□ -0.65
CDC42BPB-204ENST00000559043 LITAFQ99732 161 aa11.01□□□□□ -0.65
CDC42BPB-204ENST00000559043 DEFB131BA0A096LNP1 70 aa11□□□□□ -0.65
CDC42BPB-204ENST00000559043 H3BMG7 143 aa10.99□□□□□ -0.65
CDC42BPB-204ENST00000559043 SPINK8P0C7L1 97 aa10.99□□□□□ -0.65
CDC42BPB-204ENST00000559043 SMAGPQ0VAQ4 97 aa10.99□□□□□ -0.65
CDC42BPB-204ENST00000559043 CDKN2A-AS1Q9UH64 79 aa10.99□□□□□ -0.65
CDC42BPB-204ENST00000559043 TRGV4A0A0C4DH28 118 aa10.99□□□□□ -0.65
CDC42BPB-204ENST00000559043 RPL24P83731 157 aaKnown RBP10.99□□□□□ -0.65
CDC42BPB-204ENST00000559043 ZFAND6Q6FIF0 208 aa10.99□□□□□ -0.65
CDC42BPB-204ENST00000559043 NDUFA12Q9UI09 145 aa10.99□□□□□ -0.65
CDC42BPB-204ENST00000559043 A4D1N5 150 aa10.98□□□□□ -0.65
CDC42BPB-204ENST00000559043 HERVK_113P63121 156 aa10.98□□□□□ -0.65
CDC42BPB-204ENST00000559043 LINC00242Q5T6M2 205 aa10.98□□□□□ -0.65
CDC42BPB-204ENST00000559043 MUSTN1Q8IVN3 82 aa10.98□□□□□ -0.65
CDC42BPB-204ENST00000559043 TRAV10A0A0B4J240 114 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 LOC100131303A0A0U1RQF7 123 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 COX6A2Q02221 97 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 RNF151Q2KHN1 245 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 PRO1854Q9UHT4 67 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 PRO0461Q9UI25 63 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 TRAV26-1A0A087WT03 109 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 A0A0B4J2C4 111 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 H7C423 109 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 WWC2-AS2Q96NR7 200 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 SPANXDQ9BXN6 97 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 SPANXCQ9NY87 97 aa10.97□□□□□ -0.65
CDC42BPB-204ENST00000559043 EIF4EBP3O60516 100 aaPredicted RBP10.96□□□□□ -0.65
CDC42BPB-204ENST00000559043 TMEM101Q96IK0 257 aa10.96□□□□□ -0.65
CDC42BPB-204ENST00000559043 TMEM243Q9BU79 118 aa10.96□□□□□ -0.65
CDC42BPB-204ENST00000559043 PRO0255Q9UI72 69 aa10.96□□□□□ -0.65
CDC42BPB-204ENST00000559043 IGLV5-39A0A0G2JS06 123 aa10.96□□□□□ -0.66
CDC42BPB-204ENST00000559043 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.95□□□□□ -0.66
CDC42BPB-204ENST00000559043 TIMM17BO60830 172 aa10.95□□□□□ -0.66
CDC42BPB-204ENST00000559043 WFDC2Q14508 124 aa10.95□□□□□ -0.66
CDC42BPB-204ENST00000559043 LYRM7Q5U5X0 104 aa10.95□□□□□ -0.66
CDC42BPB-204ENST00000559043 DYNC2H1Q8NCM8 4307 aaKnown RBP10.95□□□□□ -0.66
CDC42BPB-204ENST00000559043 STARD9Q9P2P6 4700 aa10.95□□□□□ -0.66
CDC42BPB-204ENST00000559043 TENM2Q9NT68 2774 aa10.95□□□□□ -0.66
CDC42BPB-204ENST00000559043 NDUFA1O15239 70 aa10.94□□□□□ -0.66
CDC42BPB-204ENST00000559043 ADAMTSL4-AS1Q5T5F5 129 aa10.94□□□□□ -0.66
CDC42BPB-204ENST00000559043 MUC7Q8TAX7 377 aa10.94□□□□□ -0.66
CDC42BPB-204ENST00000559043 LOC107984156A0A0G2JMH3 177 aa10.94□□□□□ -0.66
CDC42BPB-204ENST00000559043 PAX4O43316 350 aa10.94□□□□□ -0.66
CDC42BPB-204ENST00000559043 ARL17AQ8IVW1 177 aa10.94□□□□□ -0.66
CDC42BPB-204ENST00000559043 UBE2L6O14933 153 aa10.93□□□□□ -0.66
CDC42BPB-204ENST00000559043 IGHV3-33P01772 117 aa10.93□□□□□ -0.66
CDC42BPB-204ENST00000559043 MIAQ16674 131 aa10.93□□□□□ -0.66
CDC42BPB-204ENST00000559043 VPS25Q9BRG1 176 aa10.92□□□□□ -0.66
CDC42BPB-204ENST00000559043 TRAV13-1A0A0B4J241 112 aa10.92□□□□□ -0.66
CDC42BPB-204ENST00000559043 SMIM1B2RUZ4 78 aa10.92□□□□□ -0.66
CDC42BPB-204ENST00000559043 TRBV20-1A0A075B6N2 111 aa10.91□□□□□ -0.66
CDC42BPB-204ENST00000559043 GYPEP15421 78 aa10.91□□□□□ -0.66
CDC42BPB-204ENST00000559043 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
CDC42BPB-204ENST00000559043 TRBV6-8A0A0A6YYG3 113 aa10.9□□□□□ -0.66
CDC42BPB-204ENST00000559043 PSMB2P49721 201 aa10.9□□□□□ -0.66
CDC42BPB-204ENST00000559043 A0A096LPF7 62 aa10.9□□□□□ -0.66
CDC42BPB-204ENST00000559043 ERG28Q9UKR5 140 aa10.9□□□□□ -0.66
CDC42BPB-204ENST00000559043 TCL1BO95988 128 aa10.89□□□□□ -0.67
CDC42BPB-204ENST00000559043 PRSS2P07478 247 aa10.89□□□□□ -0.67
CDC42BPB-204ENST00000559043 H3BNG1 76 aa10.88□□□□□ -0.67
CDC42BPB-204ENST00000559043 IFITM1P13164 125 aa10.88□□□□□ -0.67
CDC42BPB-204ENST00000559043 NUPR2A6NF83 97 aa10.88□□□□□ -0.67
CDC42BPB-204ENST00000559043 MTURNQ8N3F0 131 aa10.88□□□□□ -0.67
CDC42BPB-204ENST00000559043 APLNQ9ULZ1 77 aa10.88□□□□□ -0.67
CDC42BPB-204ENST00000559043 SMCPP49901 116 aaPredicted RBP10.87□□□□□ -0.67
CDC42BPB-204ENST00000559043 ETDBQ3ZM63 59 aa10.87□□□□□ -0.67
CDC42BPB-204ENST00000559043 SH2D6Q7Z4S9 175 aa10.87□□□□□ -0.67
CDC42BPB-204ENST00000559043 Q9H8V8 135 aa10.87□□□□□ -0.67
CDC42BPB-204ENST00000559043 PLECQ15149 4684 aaKnown RBP10.87□□□□□ -0.67
CDC42BPB-204ENST00000559043 GAGE6Q13070 117 aa10.86□□□□□ -0.67
CDC42BPB-204ENST00000559043 CASC10Q5T4H9 136 aa10.86□□□□□ -0.67
CDC42BPB-204ENST00000559043 ZNF625Q96I27 306 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms