RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 C5orf38Q86SI9 138 aa8.21□□□□□ -1.1
GABPB1-208ENST00000558970 EREGO14944 169 aa8.2□□□□□ -1.1
GABPB1-208ENST00000558970 ATP5LO75964 103 aa8.2□□□□□ -1.1
GABPB1-208ENST00000558970 LEPROTL1O95214 131 aa8.2□□□□□ -1.1
GABPB1-208ENST00000558970 UBE2D1P51668 147 aa8.2□□□□□ -1.1
GABPB1-208ENST00000558970 CD164L2Q6UWJ8 174 aa8.2□□□□□ -1.1
GABPB1-208ENST00000558970 A0A0J9YXV3 536 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 PRSS1P07477 247 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 NPSP0C0P6 89 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 COX6A2Q02221 97 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 PMVKQ15126 192 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 HIGD2BQ4VC39 106 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 LINC00242Q5T6M2 205 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 SPATA12Q7Z6I5 190 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 IFI27L1Q96BM0 104 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 CST9LQ9H4G1 147 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 DNAH11Q96DT5 4516 aa8.19□□□□□ -1.1
GABPB1-208ENST00000558970 COX7A2LO14548 114 aa8.18□□□□□ -1.1
GABPB1-208ENST00000558970 MALP21145 153 aa8.18□□□□□ -1.1
GABPB1-208ENST00000558970 KRTAP10-2P60368 255 aa8.18□□□□□ -1.1
GABPB1-208ENST00000558970 Q8N814 137 aa8.18□□□□□ -1.1
GABPB1-208ENST00000558970 LINC00526Q96FQ7 95 aa8.18□□□□□ -1.1
GABPB1-208ENST00000558970 A0A1B0GVY2 172 aa8.17□□□□□ -1.1
GABPB1-208ENST00000558970 hDV102S1A0JD36 115 aa8.17□□□□□ -1.1
GABPB1-208ENST00000558970 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
GABPB1-208ENST00000558970 GEMIN7Q9H840 131 aaKnown RBP8.17□□□□□ -1.1
GABPB1-208ENST00000558970 S100A6P06703 90 aa8.16□□□□□ -1.1
GABPB1-208ENST00000558970 IGHV3OR16-9A0A0B4J2B5 98 aa8.15□□□□□ -1.1
GABPB1-208ENST00000558970 LINC00469Q8N7U9 141 aa8.15□□□□□ -1.1
GABPB1-208ENST00000558970 CHAC1Q9BUX1 264 aa8.15□□□□□ -1.1
GABPB1-208ENST00000558970 CDKN2A-AS1Q9UH64 79 aa8.15□□□□□ -1.1
GABPB1-208ENST00000558970 HSPB8Q9UJY1 196 aa8.15□□□□□ -1.1
GABPB1-208ENST00000558970 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
GABPB1-208ENST00000558970 IGLV5-52A0A0A0MRZ9 124 aa8.14□□□□□ -1.11
GABPB1-208ENST00000558970 HERVK_113P63121 156 aa8.14□□□□□ -1.11
GABPB1-208ENST00000558970 LINC01620Q4KN68 170 aa8.14□□□□□ -1.11
GABPB1-208ENST00000558970 C14orf177Q52M58 125 aa8.14□□□□□ -1.11
GABPB1-208ENST00000558970 COA6Q5JTJ3 125 aaKnown RBP8.14□□□□□ -1.11
GABPB1-208ENST00000558970 ORAOV1Q8WV07 137 aa8.14□□□□□ -1.11
GABPB1-208ENST00000558970 PMCHL2Q9BQD1 86 aa8.14□□□□□ -1.11
GABPB1-208ENST00000558970 IGLV4-69A0A075B6H9 119 aa8.13□□□□□ -1.11
GABPB1-208ENST00000558970 IGHV1-58A0A0C4DH39 117 aa8.13□□□□□ -1.11
GABPB1-208ENST00000558970 TINCRA0A1B0GVN0 87 aa8.13□□□□□ -1.11
GABPB1-208ENST00000558970 SEC11AP67812 179 aa8.13□□□□□ -1.11
GABPB1-208ENST00000558970 CFAP161Q6P656 301 aa8.13□□□□□ -1.11
GABPB1-208ENST00000558970 IGHV3-64A0A075B6Q5 118 aa8.12□□□□□ -1.11
GABPB1-208ENST00000558970 C11orf86A6NJI1 115 aa8.12□□□□□ -1.11
GABPB1-208ENST00000558970 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
GABPB1-208ENST00000558970 APOMO95445 188 aa8.12□□□□□ -1.11
GABPB1-208ENST00000558970 SPINK8P0C7L1 97 aa8.12□□□□□ -1.11
GABPB1-208ENST00000558970 IGLC3P0DOY3 106 aa8.12□□□□□ -1.11
GABPB1-208ENST00000558970 SNRPEP62304 92 aaKnown RBP8.12□□□□□ -1.11
GABPB1-208ENST00000558970 FAM19A3Q7Z5A8 133 aa8.12□□□□□ -1.11
GABPB1-208ENST00000558970 PACRGQ96M98 296 aaPredicted RBP8.12□□□□□ -1.11
GABPB1-208ENST00000558970 MAP1LC3CQ9BXW4 147 aa8.12□□□□□ -1.11
GABPB1-208ENST00000558970 MRPL35Q9NZE8 188 aaKnown RBP8.12□□□□□ -1.11
GABPB1-208ENST00000558970 TOMM7Q9P0U1 55 aa8.12□□□□□ -1.11
GABPB1-208ENST00000558970 A0A087WZ39 114 aa8.11□□□□□ -1.11
GABPB1-208ENST00000558970 C16orf90A8MZG2 172 aa8.11□□□□□ -1.11
GABPB1-208ENST00000558970 S100A2P29034 98 aa8.11□□□□□ -1.11
GABPB1-208ENST00000558970 SPAG11BQ08648 103 aa8.11□□□□□ -1.11
GABPB1-208ENST00000558970 TMEM170BQ5T4T1 132 aa8.11□□□□□ -1.11
GABPB1-208ENST00000558970 GVQW2A0A096LPI5 108 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-208ENST00000558970 TRAV12-1A0A0B4J245 112 aa8.1□□□□□ -1.11
GABPB1-208ENST00000558970 F8VRH5 84 aa8.1□□□□□ -1.11
GABPB1-208ENST00000558970 ZNF22P17026 224 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-208ENST00000558970 KRTDAPP60985 99 aa8.1□□□□□ -1.11
GABPB1-208ENST00000558970 ODF1Q14990 250 aa8.1□□□□□ -1.11
GABPB1-208ENST00000558970 HIST3H2BBQ8N257 126 aa8.1□□□□□ -1.11
GABPB1-208ENST00000558970 NTN5Q8WTR8 489 aaPredicted RBP8.1□□□□□ -1.11
GABPB1-208ENST00000558970 PKHD1P08F94 4074 aa8.09□□□□□ -1.11
GABPB1-208ENST00000558970 SLPIP03973 132 aa8.09□□□□□ -1.11
GABPB1-208ENST00000558970 C3orf79P0CE67 100 aa8.09□□□□□ -1.11
GABPB1-208ENST00000558970 DNAH5Q8TE73 4624 aa8.08□□□□□ -1.12
GABPB1-208ENST00000558970 C5orf52A6NGY3 159 aa8.08□□□□□ -1.12
GABPB1-208ENST00000558970 SMIM1B2RUZ4 78 aa8.08□□□□□ -1.12
GABPB1-208ENST00000558970 H3BRM9 83 aa8.08□□□□□ -1.12
GABPB1-208ENST00000558970 SYS1-DBNDD2H3BUS1 97 aa8.08□□□□□ -1.12
GABPB1-208ENST00000558970 OR10D4PQ8NGN7 298 aa8.08□□□□□ -1.12
GABPB1-208ENST00000558970 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
GABPB1-208ENST00000558970 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
GABPB1-208ENST00000558970 DYNC1H1Q14204 4646 aaKnown RBP8.07□□□□□ -1.12
GABPB1-208ENST00000558970 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
GABPB1-208ENST00000558970 PRSS2P07478 247 aa8.07□□□□□ -1.12
GABPB1-208ENST00000558970 GCSHP23434 173 aa8.07□□□□□ -1.12
GABPB1-208ENST00000558970 C2orf82Q6UX34 121 aa8.07□□□□□ -1.12
GABPB1-208ENST00000558970 HIST1H2BLQ99880 126 aa8.07□□□□□ -1.12
GABPB1-208ENST00000558970 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.06□□□□□ -1.12
GABPB1-208ENST00000558970 SYCNQ0VAF6 134 aa8.06□□□□□ -1.12
GABPB1-208ENST00000558970 CDPF1Q6NVV7 123 aa8.06□□□□□ -1.12
GABPB1-208ENST00000558970 Q6ZRU5 148 aa8.06□□□□□ -1.12
GABPB1-208ENST00000558970 CARD19Q96LW7 228 aa8.06□□□□□ -1.12
GABPB1-208ENST00000558970 ABCA13Q86UQ4 5058 aa8.06□□□□□ -1.12
GABPB1-208ENST00000558970 DPM2O94777 84 aa8.05□□□□□ -1.12
GABPB1-208ENST00000558970 IGKCP01834 107 aa8.05□□□□□ -1.12
GABPB1-208ENST00000558970 KRTAP10-1P60331 282 aa8.05□□□□□ -1.12
GABPB1-208ENST00000558970 CNBPP62633 177 aaKnown RBP8.05□□□□□ -1.12
GABPB1-208ENST00000558970 C6orf226Q5I0X4 101 aa8.05□□□□□ -1.12
GABPB1-208ENST00000558970 NDUFA1O15239 70 aa8.04□□□□□ -1.12
GABPB1-208ENST00000558970 SMIM6P0DI80 62 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms