RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 SS18Q15532 418 aa9.5□□□□□ -0.89
TPM1-215ENST00000558868 BATFQ16520 125 aa9.5□□□□□ -0.89
TPM1-215ENST00000558868 TAL2Q16559 108 aa9.5□□□□□ -0.89
TPM1-215ENST00000558868 MPV17L2Q567V2 206 aa9.5□□□□□ -0.89
TPM1-215ENST00000558868 SCGB1D4Q6XE38 83 aa9.5□□□□□ -0.89
TPM1-215ENST00000558868 C15orf53Q8NAA6 179 aa9.5□□□□□ -0.89
TPM1-215ENST00000558868 CDKN2A-AS1Q9UH64 79 aa9.5□□□□□ -0.89
TPM1-215ENST00000558868 NHLRC4P0CG21 123 aaPredicted RBP9.49□□□□□ -0.89
TPM1-215ENST00000558868 IGHV3-30-3P0DP02 117 aa9.49□□□□□ -0.89
TPM1-215ENST00000558868 COX6A2Q02221 97 aa9.49□□□□□ -0.89
TPM1-215ENST00000558868 COL5A1-AS1Q5SY13 56 aa9.49□□□□□ -0.89
TPM1-215ENST00000558868 LINC00959A0A1B0GUT2 108 aa9.48□□□□□ -0.89
TPM1-215ENST00000558868 SPINK8P0C7L1 97 aa9.48□□□□□ -0.89
TPM1-215ENST00000558868 BVES-AS1Q5T3Y7 98 aa9.48□□□□□ -0.89
TPM1-215ENST00000558868 IGHV3-64A0A075B6Q5 118 aa9.47□□□□□ -0.89
TPM1-215ENST00000558868 IGKV3OR2-268A0A0C4DH90 116 aa9.47□□□□□ -0.89
TPM1-215ENST00000558868 TSPEAR-AS2P59090 65 aa9.47□□□□□ -0.89
TPM1-215ENST00000558868 TRAV8-3A0A0A6YYJ7 113 aa9.46□□□□□ -0.9
TPM1-215ENST00000558868 IGLV5-39A0A0G2JS06 123 aa9.46□□□□□ -0.9
TPM1-215ENST00000558868 ANGP03950 147 aaKnown RBP9.46□□□□□ -0.9
TPM1-215ENST00000558868 ORAOV1Q8WV07 137 aa9.46□□□□□ -0.9
TPM1-215ENST00000558868 ZFAND6Q6FIF0 208 aa9.45□□□□□ -0.9
TPM1-215ENST00000558868 LINC01561Q8N1V8 128 aa9.45□□□□□ -0.9
TPM1-215ENST00000558868 LINC00269Q8N2A0 174 aa9.45□□□□□ -0.9
TPM1-215ENST00000558868 HIST1H4GQ99525 98 aa9.45□□□□□ -0.9
TPM1-215ENST00000558868 A6NDN8 102 aa9.44□□□□□ -0.9
TPM1-215ENST00000558868 SMIM1B2RUZ4 78 aa9.44□□□□□ -0.9
TPM1-215ENST00000558868 REG3AQ06141 175 aa9.44□□□□□ -0.9
TPM1-215ENST00000558868 NDUFA12Q9UI09 145 aa9.44□□□□□ -0.9
TPM1-215ENST00000558868 A0A087WZ39 114 aa9.43□□□□□ -0.9
TPM1-215ENST00000558868 IGHV3OR16-9A0A0B4J2B5 98 aa9.43□□□□□ -0.9
TPM1-215ENST00000558868 GCSHP23434 173 aa9.43□□□□□ -0.9
TPM1-215ENST00000558868 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
TPM1-215ENST00000558868 CEND1Q8N111 149 aa9.43□□□□□ -0.9
TPM1-215ENST00000558868 TM2D2Q9BX73 214 aa9.43□□□□□ -0.9
TPM1-215ENST00000558868 SPANXB1Q9NS25 103 aaPredicted RBP9.43□□□□□ -0.9
TPM1-215ENST00000558868 TMEM238C9JI98 176 aa9.42□□□□□ -0.9
TPM1-215ENST00000558868 NDUFA1O15239 70 aa9.42□□□□□ -0.9
TPM1-215ENST00000558868 ESRGQ1W209 222 aa9.42□□□□□ -0.9
TPM1-215ENST00000558868 PTTG1IPP53801 180 aa9.41□□□□□ -0.9
TPM1-215ENST00000558868 CD164L2Q6UWJ8 174 aa9.41□□□□□ -0.9
TPM1-215ENST00000558868 PRR34Q9NV39 138 aa9.41□□□□□ -0.9
TPM1-215ENST00000558868 TRAV8-4A0A0B4J246 113 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 A0A0J9YXY3 114 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 TMEM238LA0A1B0GVL6 79 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 A6NJY4 79 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 TIMM17BO60830 172 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 CRPP02741 224 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 XCL1P47992 114 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 HERV-K104P63124 156 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 CIRBPQ14011 172 aaKnown RBP9.4□□□□□ -0.9
TPM1-215ENST00000558868 SFTA2Q6UW10 78 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 CLPSL2Q6UWE3 100 aa9.4□□□□□ -0.9
TPM1-215ENST00000558868 CHCHD10Q8WYQ3 142 aaPredicted RBP9.4□□□□□ -0.9
TPM1-215ENST00000558868 CCL18P55774 89 aa9.39□□□□□ -0.91
TPM1-215ENST00000558868 Q6ZVH6 145 aa9.39□□□□□ -0.91
TPM1-215ENST00000558868 WFDC10BQ8IUB3 73 aa9.39□□□□□ -0.91
TPM1-215ENST00000558868 C10orf126Q8N4M7 172 aa9.39□□□□□ -0.91
TPM1-215ENST00000558868 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
TPM1-215ENST00000558868 KLK12Q9UKR0 248 aa9.39□□□□□ -0.91
TPM1-215ENST00000558868 TENM3Q9P273 2699 aa9.38□□□□□ -0.91
TPM1-215ENST00000558868 IGLL5B9A064 214 aa9.38□□□□□ -0.91
TPM1-215ENST00000558868 COX7A2LO14548 114 aa9.38□□□□□ -0.91
TPM1-215ENST00000558868 IGHV3-30P01768 117 aa9.38□□□□□ -0.91
TPM1-215ENST00000558868 IGHV3-33P01772 117 aa9.38□□□□□ -0.91
TPM1-215ENST00000558868 IGHV3-30-5P0DP03 117 aa9.38□□□□□ -0.91
TPM1-215ENST00000558868 LINC01556Q5JQF7 62 aa9.38□□□□□ -0.91
TPM1-215ENST00000558868 C5orf38Q86SI9 138 aa9.38□□□□□ -0.91
TPM1-215ENST00000558868 HYDINQ4G0P3 5121 aa9.38□□□□□ -0.91
TPM1-215ENST00000558868 SMIM13P0DJ93 91 aa9.37□□□□□ -0.91
TPM1-215ENST00000558868 MIAQ16674 131 aa9.37□□□□□ -0.91
TPM1-215ENST00000558868 Q8N3U1 123 aa9.37□□□□□ -0.91
TPM1-215ENST00000558868 Q9H8V8 135 aa9.37□□□□□ -0.91
TPM1-215ENST00000558868 APOMO95445 188 aa9.36□□□□□ -0.91
TPM1-215ENST00000558868 PRSS2P07478 247 aa9.36□□□□□ -0.91
TPM1-215ENST00000558868 MALP21145 153 aa9.36□□□□□ -0.91
TPM1-215ENST00000558868 FXYD2P54710 66 aa9.36□□□□□ -0.91
TPM1-215ENST00000558868 ZNF625Q96I27 306 aaPredicted RBP9.36□□□□□ -0.91
TPM1-215ENST00000558868 SPANXDQ9BXN6 97 aa9.36□□□□□ -0.91
TPM1-215ENST00000558868 SPANXCQ9NY87 97 aa9.36□□□□□ -0.91
TPM1-215ENST00000558868 TOMM7Q9P0U1 55 aa9.36□□□□□ -0.91
TPM1-215ENST00000558868 DNAH10OSP0CZ25 163 aa9.35□□□□□ -0.91
TPM1-215ENST00000558868 ENHOQ6UWT2 76 aa9.35□□□□□ -0.91
TPM1-215ENST00000558868 Q8IZM0 81 aa9.35□□□□□ -0.91
TPM1-215ENST00000558868 COPS9Q8WXC6 57 aa9.35□□□□□ -0.91
TPM1-215ENST00000558868 UBE2WQ96B02 151 aa9.35□□□□□ -0.91
TPM1-215ENST00000558868 HUWE1Q7Z6Z7 4374 aaKnown RBP9.34□□□□□ -0.91
TPM1-215ENST00000558868 IGLV10-54A0A075B6I4 117 aa9.34□□□□□ -0.91
TPM1-215ENST00000558868 A0A1B0GV90 55 aa9.34□□□□□ -0.91
TPM1-215ENST00000558868 GAGE12HA6NDE8 117 aa9.34□□□□□ -0.91
TPM1-215ENST00000558868 IFITM1P13164 125 aa9.34□□□□□ -0.91
TPM1-215ENST00000558868 RPL24P83731 157 aaKnown RBP9.34□□□□□ -0.91
TPM1-215ENST00000558868 FOXI1Q12951 378 aa9.34□□□□□ -0.91
TPM1-215ENST00000558868 C6orf226Q5I0X4 101 aa9.34□□□□□ -0.91
TPM1-215ENST00000558868 TAX1BP3O14907 124 aa9.33□□□□□ -0.92
TPM1-215ENST00000558868 CXCL5P42830 114 aa9.33□□□□□ -0.92
TPM1-215ENST00000558868 MEIG1Q5JSS6 88 aa9.33□□□□□ -0.92
TPM1-215ENST00000558868 CFAP161Q6P656 301 aa9.33□□□□□ -0.92
TPM1-215ENST00000558868 UPK3BQ9BT76 320 aa9.33□□□□□ -0.92
TPM1-215ENST00000558868 NHP2Q9NX24 153 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms