RNA–Protein interactions for RNA: ENST00000556309.5

SUPT16H-206, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 3

Gene SUPT16H, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-206ENST00000556309 COL24A1Q17RW2 1714 aa0.43□□□□□ -2.34
SUPT16H-206ENST00000556309 ARAP2Q8WZ64 1704 aa0.43□□□□□ -2.34
SUPT16H-206ENST00000556309 ANKRD31Q8N7Z5 1873 aa0.43□□□□□ -2.34
SUPT16H-206ENST00000556309 CPS1P31327 1500 aa0.43□□□□□ -2.34
SUPT16H-206ENST00000556309 AGLP35573 1532 aa0.43□□□□□ -2.34
SUPT16H-206ENST00000556309 EFCAB6Q5THR3 1501 aa0.43□□□□□ -2.34
SUPT16H-206ENST00000556309 PHIPQ8WWQ0 1821 aa0.43□□□□□ -2.34
SUPT16H-206ENST00000556309 MYH7P12883 1935 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 RGPD8O14715 1765 aaPredicted RBP0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 RGPD5Q99666 1765 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 LAMC1P11047 1609 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 NESP48681 1621 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 TOP2BQ02880 1626 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 TARBP1Q13395 1621 aaKnown RBP0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 USP32Q8NFA0 1604 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 CD163L1Q9NR16 1453 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 FANCMQ8IYD8 2048 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 SBF1O95248 1867 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 FER1L6Q2WGJ9 1857 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 DOCK5Q9H7D0 1870 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 ARHGEF28Q8N1W1 1705 aaKnown RBP0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 ABCA3Q99758 1704 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 DIP2AQ14689 1571 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 CDC42BPGQ6DT37 1551 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 DIP2BQ9P265 1576 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 CEP170BQ9Y4F5 1589 aaPredicted RBP0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 LOC110117498A0A087WWA1 95 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 TRBV30A0A0K0K1B3 111 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 TRBV6-1A0A0K0K1D8 114 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 C2orf70A6NJV1 201 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 IQCF6A8MYZ5 107 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 H0Y9P7 68 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 H0YGX0 51 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 IGLV1-51P01701 117 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 C3orf79P0CE67 100 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 CCL3L1P16619 93 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 RPL37AP61513 92 aaKnown RBP0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 SPINK13Q1W4C9 94 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 DEFB114Q30KQ6 69 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 TDRG1Q3Y452 100 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 GDF5OSQ5U4N7 250 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 Q5VV11 94 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 LINC00575Q6W349 94 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 Q6ZQY7 126 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 DEFB107AQ8IZN7 70 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 WFDC9Q8NEX5 89 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 FDCSPQ8NFU4 85 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 TMEM263Q8WUH6 116 aaKnown RBP0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 LINC00208Q96KT6 92 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 WFDC6Q9BQY6 131 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 FAM103A1Q9BTL3 118 aaKnown RBP0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 BPESC1Q9GZL8 116 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 WFDC10AQ9H1F0 79 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 CDC42SE2Q9NRR3 84 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 NDUFA4L2Q9NRX3 87 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 MUC5BQ9HC84 5762 aaPredicted RBP0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 NUP98P52948 1817 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 XIRP1Q702N8 1843 aaKnown RBP0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 NHSQ6T4R5 1651 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 CTTNBP2Q8WZ74 1663 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 HMGXB3Q12766 1538 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 ASXL1Q8IXJ9 1541 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 MYH2Q9UKX2 1941 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 PLXND1Q9Y4D7 1925 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 KIDINS220Q9ULH0 1771 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 PAPPAQ13219 1627 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 ABCA6Q8N139 1617 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 MADDQ8WXG6 1647 aa0.42□□□□□ -2.34
SUPT16H-206ENST00000556309 OBSL1O75147 1896 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 MON2Q7Z3U7 1717 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 MYH9P35579 1960 aaKnown RBP0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 ABCC8Q09428 1581 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 SAMD9Q5K651 1589 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 ERCC6L2Q5T890 1561 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 PSME4Q14997 1843 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 MYOM1P52179 1685 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 PLCH1Q4KWH8 1693 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 USP54Q70EL1 1684 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 TCHHQ07283 1943 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 MYLKQ15746 1914 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 TRAV21A0A0B4J279 112 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 TRBV7-4A0A0J9YYF1 115 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 SPTY2D1-AS1A0A0U1RR47 76 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 FAM223BA6NKX1 122 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 M0R135 149 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 M0R2N4 97 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 M0R3E3 92 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 INE1O15225 51 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 IGLV3-1P01715 115 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 IFI6P09912 130 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 ACYP2P14621 99 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 FCER1GP30273 86 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 EFNA4P52798 201 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 CCL18P55774 89 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 CNBPP62633 177 aaKnown RBP0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 NREPQ16612 68 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 DEFB113Q30KQ7 82 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 DEFB112Q30KQ8 113 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 KRTAP26-1Q6PEX3 210 aa0.41□□□□□ -2.34
SUPT16H-206ENST00000556309 ZCCHC23Q6ZST2 131 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms