RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 A0A1B0GUV1 79 aa7.82□□□□□ -1.16
ACTN1-216ENST00000556083 KIAA1549LQ6ZVL6 1849 aa7.82□□□□□ -1.16
ACTN1-216ENST00000556083 TEX49A0A1B0GTD5 131 aa7.82□□□□□ -1.16
ACTN1-216ENST00000556083 BEAN1Q3B7T3 259 aa7.82□□□□□ -1.16
ACTN1-216ENST00000556083 IGIPA6NJ69 53 aa7.81□□□□□ -1.16
ACTN1-216ENST00000556083 SORL1Q92673 2214 aa7.81□□□□□ -1.16
ACTN1-216ENST00000556083 TNRC6BQ9UPQ9 1833 aaKnown RBP7.81□□□□□ -1.16
ACTN1-216ENST00000556083 C10orf25Q5T742 122 aa7.81□□□□□ -1.16
ACTN1-216ENST00000556083 IGHV4-30-4P0DP06 118 aa7.81□□□□□ -1.16
ACTN1-216ENST00000556083 ENHOQ6UWT2 76 aa7.81□□□□□ -1.16
ACTN1-216ENST00000556083 MED12LQ86YW9 2145 aa7.8□□□□□ -1.16
ACTN1-216ENST00000556083 MRPS12O15235 138 aaKnown RBP7.8□□□□□ -1.16
ACTN1-216ENST00000556083 C1orf158Q8N1D5 194 aa7.8□□□□□ -1.16
ACTN1-216ENST00000556083 PLAC8L1A1L4L8 177 aa7.79□□□□□ -1.16
ACTN1-216ENST00000556083 ODF3L2Q3SX64 289 aa7.79□□□□□ -1.16
ACTN1-216ENST00000556083 MAPKAPK5-AS1Q8N8E1 139 aa7.79□□□□□ -1.16
ACTN1-216ENST00000556083 A0A1B0GW54 56 aa7.79□□□□□ -1.16
ACTN1-216ENST00000556083 SMIM11BQ8TCY0 68 aa7.78□□□□□ -1.16
ACTN1-216ENST00000556083 COL5A1P20908 1838 aaPredicted RBP7.78□□□□□ -1.16
ACTN1-216ENST00000556083 CYSRT1A8MQ03 144 aa7.78□□□□□ -1.16
ACTN1-216ENST00000556083 PRYO14603 147 aa7.78□□□□□ -1.16
ACTN1-216ENST00000556083 NTM-AS1Q6ZSK4 140 aa7.78□□□□□ -1.16
ACTN1-216ENST00000556083 SDIM1Q6ZPB5 146 aa7.78□□□□□ -1.16
ACTN1-216ENST00000556083 LINC00242Q5T6M2 205 aa7.78□□□□□ -1.16
ACTN1-216ENST00000556083 M0QXV9 152 aa7.77□□□□□ -1.17
ACTN1-216ENST00000556083 C11orf21Q9P2W6 132 aa7.77□□□□□ -1.17
ACTN1-216ENST00000556083 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.77□□□□□ -1.17
ACTN1-216ENST00000556083 COX7CP15954 63 aa7.77□□□□□ -1.17
ACTN1-216ENST00000556083 MUC22E2RYF6 1773 aaPredicted RBP7.77□□□□□ -1.17
ACTN1-216ENST00000556083 FSHBP01225 129 aa7.76□□□□□ -1.17
ACTN1-216ENST00000556083 Q8N2B8 174 aa7.76□□□□□ -1.17
ACTN1-216ENST00000556083 BRK1Q8WUW1 75 aa7.76□□□□□ -1.17
ACTN1-216ENST00000556083 AMELXQ99217 191 aa7.76□□□□□ -1.17
ACTN1-216ENST00000556083 MYO18BQ8IUG5 2567 aa7.76□□□□□ -1.17
ACTN1-216ENST00000556083 PRR9Q5T870 116 aa7.76□□□□□ -1.17
ACTN1-216ENST00000556083 CHD8Q9HCK8 2581 aa7.76□□□□□ -1.17
ACTN1-216ENST00000556083 TRAV7A0A075B6U4 112 aa7.75□□□□□ -1.17
ACTN1-216ENST00000556083 PTPN13Q12923 2485 aa7.75□□□□□ -1.17
ACTN1-216ENST00000556083 SMIM1B2RUZ4 78 aa7.75□□□□□ -1.17
ACTN1-216ENST00000556083 VPREB1P12018 145 aa7.75□□□□□ -1.17
ACTN1-216ENST00000556083 PRR14LQ5THK1 2151 aa7.75□□□□□ -1.17
ACTN1-216ENST00000556083 ARHGAP21Q5T5U3 1957 aa7.74□□□□□ -1.17
ACTN1-216ENST00000556083 REG3GQ6UW15 175 aa7.74□□□□□ -1.17
ACTN1-216ENST00000556083 C10orf99Q6UWK7 81 aa7.74□□□□□ -1.17
ACTN1-216ENST00000556083 C2orf91Q6ZV80 131 aa7.74□□□□□ -1.17
ACTN1-216ENST00000556083 RPL37AP8A6NKH3 93 aa7.74□□□□□ -1.17
ACTN1-216ENST00000556083 WFDC10BQ8IUB3 73 aa7.74□□□□□ -1.17
ACTN1-216ENST00000556083 A0A0J9YWU9 116 aa7.74□□□□□ -1.17
ACTN1-216ENST00000556083 LRCOL1A6NCL2 159 aa7.74□□□□□ -1.17
ACTN1-216ENST00000556083 PROK1P58294 105 aa7.74□□□□□ -1.17
ACTN1-216ENST00000556083 IGKV2-28A0A075B6P5 120 aa7.73□□□□□ -1.17
ACTN1-216ENST00000556083 IGKV2D-28P01615 120 aa7.73□□□□□ -1.17
ACTN1-216ENST00000556083 MT-ATP8P03928 68 aa7.73□□□□□ -1.17
ACTN1-216ENST00000556083 LIMD2Q9BT23 127 aa7.73□□□□□ -1.17
ACTN1-216ENST00000556083 A0A096LNI7 61 aa7.73□□□□□ -1.17
ACTN1-216ENST00000556083 SLPIP03973 132 aa7.73□□□□□ -1.17
ACTN1-216ENST00000556083 Q8N814 137 aa7.72□□□□□ -1.17
ACTN1-216ENST00000556083 LY6G6CO95867 125 aa7.72□□□□□ -1.17
ACTN1-216ENST00000556083 SMIM26A0A096LP01 95 aa7.72□□□□□ -1.17
ACTN1-216ENST00000556083 H3BNG1 76 aa7.72□□□□□ -1.17
ACTN1-216ENST00000556083 FHL2Q14192 279 aa7.72□□□□□ -1.17
ACTN1-216ENST00000556083 C1orf137Q5JT78 98 aa7.72□□□□□ -1.17
ACTN1-216ENST00000556083 POM121L12Q8N7R1 296 aa7.71□□□□□ -1.18
ACTN1-216ENST00000556083 C3orf84H3BNL1 204 aa7.7□□□□□ -1.18
ACTN1-216ENST00000556083 LRP4O75096 1905 aa7.7□□□□□ -1.18
ACTN1-216ENST00000556083 TRBV10-3A0A0K0K1G6 114 aa7.7□□□□□ -1.18
ACTN1-216ENST00000556083 NANOS2P60321 138 aaKnown RBP7.7□□□□□ -1.18
ACTN1-216ENST00000556083 BCE1O60756 84 aa7.69□□□□□ -1.18
ACTN1-216ENST00000556083 LOC100131303A0A0U1RQF7 123 aa7.69□□□□□ -1.18
ACTN1-216ENST00000556083 AVPP01185 164 aa7.69□□□□□ -1.18
ACTN1-216ENST00000556083 IGLV5-52A0A0A0MRZ9 124 aa7.68□□□□□ -1.18
ACTN1-216ENST00000556083 SPTBN4Q9H254 2564 aa7.68□□□□□ -1.18
ACTN1-216ENST00000556083 IGLV2-18A0A075B6J9 118 aa7.68□□□□□ -1.18
ACTN1-216ENST00000556083 SPINK6Q6UWN8 80 aa7.68□□□□□ -1.18
ACTN1-216ENST00000556083 WFDC13Q8IUB5 93 aa7.68□□□□□ -1.18
ACTN1-216ENST00000556083 UNQ6190/PRO20217Q6UXQ8 127 aa7.67□□□□□ -1.18
ACTN1-216ENST00000556083 C1orf134Q5TEV5 83 aa7.67□□□□□ -1.18
ACTN1-216ENST00000556083 RETNQ9HD89 108 aa7.67□□□□□ -1.18
ACTN1-216ENST00000556083 SCXQ7RTU7 201 aa7.67□□□□□ -1.18
ACTN1-216ENST00000556083 TRBV7-6A0A0J9YX20 115 aa7.66□□□□□ -1.18
ACTN1-216ENST00000556083 Q6ZS46 218 aa7.66□□□□□ -1.18
ACTN1-216ENST00000556083 CEP192Q8TEP8 1941 aa7.66□□□□□ -1.18
ACTN1-216ENST00000556083 C18orf65Q6ZTR6 163 aa7.66□□□□□ -1.18
ACTN1-216ENST00000556083 PPDPFQ9H3Y8 114 aa7.66□□□□□ -1.18
ACTN1-216ENST00000556083 PCDH15Q96QU1 1955 aa7.66□□□□□ -1.18
ACTN1-216ENST00000556083 WFDC10AQ9H1F0 79 aa7.65□□□□□ -1.18
ACTN1-216ENST00000556083 IGF2RP11717 2491 aa7.65□□□□□ -1.19
ACTN1-216ENST00000556083 FHL3Q13643 280 aa7.65□□□□□ -1.19
ACTN1-216ENST00000556083 A6NED7 52 aa7.64□□□□□ -1.19
ACTN1-216ENST00000556083 HIVEP3Q5T1R4 2406 aa7.64□□□□□ -1.19
ACTN1-216ENST00000556083 PCNTO95613 3336 aa7.64□□□□□ -1.19
ACTN1-216ENST00000556083 hDV103S1A0JD37 113 aa7.64□□□□□ -1.19
ACTN1-216ENST00000556083 Q6ZVQ6 151 aa7.64□□□□□ -1.19
ACTN1-216ENST00000556083 CCDC168Q8NDH2 2452 aa7.64□□□□□ -1.19
ACTN1-216ENST00000556083 IGLV9-49A0A0B4J1Y8 123 aa7.64□□□□□ -1.19
ACTN1-216ENST00000556083 LYPD5Q6UWN5 251 aa7.64□□□□□ -1.19
ACTN1-216ENST00000556083 C6orf223Q8N319 242 aa7.64□□□□□ -1.19
ACTN1-216ENST00000556083 PRB2P02812 416 aaPredicted RBP7.64□□□□□ -1.19
ACTN1-216ENST00000556083 LINC01556Q5JQF7 62 aa7.63□□□□□ -1.19
ACTN1-216ENST00000556083 A8MZ25 164 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms