RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 CR1P17927 2039 aa12.2□□□□□ -0.46
PPP4R3A-208ENST00000555462 SMIM1B2RUZ4 78 aa12.2□□□□□ -0.46
PPP4R3A-208ENST00000555462 INSP01308 110 aa12.2□□□□□ -0.46
PPP4R3A-208ENST00000555462 RNASE1P07998 156 aaKnown RBP12.2□□□□□ -0.46
PPP4R3A-208ENST00000555462 LINC00158P58513 81 aa12.2□□□□□ -0.46
PPP4R3A-208ENST00000555462 HERV-K104P63124 156 aa12.19□□□□□ -0.46
PPP4R3A-208ENST00000555462 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
PPP4R3A-208ENST00000555462 KLK5Q9Y337 293 aaPredicted RBP12.19□□□□□ -0.46
PPP4R3A-208ENST00000555462 UBE2L6O14933 153 aa12.18□□□□□ -0.46
PPP4R3A-208ENST00000555462 ODF3L2Q3SX64 289 aa12.18□□□□□ -0.46
PPP4R3A-208ENST00000555462 MIR7-3HGQ8N6C7 128 aa12.18□□□□□ -0.46
PPP4R3A-208ENST00000555462 YAE1D1Q9NRH1 226 aa12.18□□□□□ -0.46
PPP4R3A-208ENST00000555462 C1orf158Q8N1D5 194 aa12.18□□□□□ -0.46
PPP4R3A-208ENST00000555462 PDZD2O15018 2839 aa12.17□□□□□ -0.46
PPP4R3A-208ENST00000555462 NDUFA1O15239 70 aa12.17□□□□□ -0.46
PPP4R3A-208ENST00000555462 ATRQ13535 2644 aa12.17□□□□□ -0.46
PPP4R3A-208ENST00000555462 DEFB114Q30KQ6 69 aa12.16□□□□□ -0.46
PPP4R3A-208ENST00000555462 TEP1Q99973 2627 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-208ENST00000555462 H3BT86 120 aa12.16□□□□□ -0.46
PPP4R3A-208ENST00000555462 RPL36AP83881 106 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-208ENST00000555462 RPL36ALQ969Q0 106 aaKnown RBP12.16□□□□□ -0.46
PPP4R3A-208ENST00000555462 ESM1Q9NQ30 184 aa12.16□□□□□ -0.46
PPP4R3A-208ENST00000555462 UNC79Q9P2D8 2635 aa12.16□□□□□ -0.46
PPP4R3A-208ENST00000555462 IGKV3D-7A0A0C4DH55 119 aa12.16□□□□□ -0.46
PPP4R3A-208ENST00000555462 DEFB130BP0DP73 79 aa12.15□□□□□ -0.46
PPP4R3A-208ENST00000555462 DEFB130AP0DP74 79 aa12.15□□□□□ -0.46
PPP4R3A-208ENST00000555462 PRR3P79522 188 aaKnown RBP12.15□□□□□ -0.46
PPP4R3A-208ENST00000555462 C14orf132Q9NPU4 83 aa12.15□□□□□ -0.46
PPP4R3A-208ENST00000555462 HELZ2Q9BYK8 2649 aaKnown RBP12.14□□□□□ -0.47
PPP4R3A-208ENST00000555462 SHISA2Q6UWI4 295 aa12.14□□□□□ -0.47
PPP4R3A-208ENST00000555462 HERVK_113P63121 156 aa12.14□□□□□ -0.47
PPP4R3A-208ENST00000555462 IGLV4-60A0A075B6I1 120 aa12.13□□□□□ -0.47
PPP4R3A-208ENST00000555462 COX7A2LO14548 114 aa12.13□□□□□ -0.47
PPP4R3A-208ENST00000555462 SDIM1Q6ZPB5 146 aa12.13□□□□□ -0.47
PPP4R3A-208ENST00000555462 PRORYQ9H606 182 aa12.13□□□□□ -0.47
PPP4R3A-208ENST00000555462 A0A087WYN8 130 aa12.13□□□□□ -0.47
PPP4R3A-208ENST00000555462 TIRAPP58753 221 aa12.13□□□□□ -0.47
PPP4R3A-208ENST00000555462 LINC00337Q8N6G1 96 aa12.13□□□□□ -0.47
PPP4R3A-208ENST00000555462 PAX4O43316 350 aa12.12□□□□□ -0.47
PPP4R3A-208ENST00000555462 Q6YL49 198 aa12.12□□□□□ -0.47
PPP4R3A-208ENST00000555462 PEMTQ9UBM1 199 aa12.12□□□□□ -0.47
PPP4R3A-208ENST00000555462 MRPL23Q16540 153 aaKnown RBP12.12□□□□□ -0.47
PPP4R3A-208ENST00000555462 SND1-IT1Q9HBX3 110 aa12.11□□□□□ -0.47
PPP4R3A-208ENST00000555462 TRGV4A0A0C4DH28 118 aa12.11□□□□□ -0.47
PPP4R3A-208ENST00000555462 K7EQD1 137 aa12.11□□□□□ -0.47
PPP4R3A-208ENST00000555462 CDC42SE2Q9NRR3 84 aa12.11□□□□□ -0.47
PPP4R3A-208ENST00000555462 A0A087WVE0 104 aa12.1□□□□□ -0.47
PPP4R3A-208ENST00000555462 HIVEP1P15822 2718 aa12.1□□□□□ -0.47
PPP4R3A-208ENST00000555462 XCL1P47992 114 aa12.1□□□□□ -0.47
PPP4R3A-208ENST00000555462 NCR3O14931 201 aa12.09□□□□□ -0.47
PPP4R3A-208ENST00000555462 CRPP02741 224 aa12.09□□□□□ -0.47
PPP4R3A-208ENST00000555462 IGHV4-31P0DP07 118 aa12.09□□□□□ -0.47
PPP4R3A-208ENST00000555462 DEFB4AO15263 64 aa12.09□□□□□ -0.47
PPP4R3A-208ENST00000555462 LECT2O14960 151 aa12.08□□□□□ -0.48
PPP4R3A-208ENST00000555462 TENM1Q9UKZ4 2725 aa12.08□□□□□ -0.48
PPP4R3A-208ENST00000555462 F8P00451 2351 aa12.08□□□□□ -0.48
PPP4R3A-208ENST00000555462 IGLV10-54A0A075B6I4 117 aa12.07□□□□□ -0.48
PPP4R3A-208ENST00000555462 DNAL4O96015 105 aa12.07□□□□□ -0.48
PPP4R3A-208ENST00000555462 IGLV5-39A0A0G2JS06 123 aa12.07□□□□□ -0.48
PPP4R3A-208ENST00000555462 WFDC9Q8NEX5 89 aa12.07□□□□□ -0.48
PPP4R3A-208ENST00000555462 TMEM243Q9BU79 118 aa12.07□□□□□ -0.48
PPP4R3A-208ENST00000555462 SMIM11BQ8TCY0 68 aa12.07□□□□□ -0.48
PPP4R3A-208ENST00000555462 EDA2RQ9HAV5 297 aa12.07□□□□□ -0.48
PPP4R3A-208ENST00000555462 PKD1L1Q8TDX9 2849 aa12.07□□□□□ -0.48
PPP4R3A-208ENST00000555462 F5H768 121 aa12.06□□□□□ -0.48
PPP4R3A-208ENST00000555462 C9orf153Q5TBE3 101 aa12.06□□□□□ -0.48
PPP4R3A-208ENST00000555462 LOC107984640A0A0U1RRK4 108 aa12.06□□□□□ -0.48
PPP4R3A-208ENST00000555462 IGKV2-28A0A075B6P5 120 aa12.05□□□□□ -0.48
PPP4R3A-208ENST00000555462 IGKV2D-28P01615 120 aa12.05□□□□□ -0.48
PPP4R3A-208ENST00000555462 C22orf24Q9Y442 160 aa12.05□□□□□ -0.48
PPP4R3A-208ENST00000555462 Q8N3U1 123 aa12.05□□□□□ -0.48
PPP4R3A-208ENST00000555462 LINC00526Q96FQ7 95 aa12.05□□□□□ -0.48
PPP4R3A-208ENST00000555462 TENM4Q6N022 2769 aa12.05□□□□□ -0.48
PPP4R3A-208ENST00000555462 COX7B2Q8TF08 81 aa12.04□□□□□ -0.48
PPP4R3A-208ENST00000555462 CCL24O00175 119 aa12.04□□□□□ -0.48
PPP4R3A-208ENST00000555462 BEAN1Q3B7T3 259 aa12.04□□□□□ -0.48
PPP4R3A-208ENST00000555462 WFDC11Q8NEX6 87 aa12.04□□□□□ -0.48
PPP4R3A-208ENST00000555462 M0QXV9 152 aa12.03□□□□□ -0.48
PPP4R3A-208ENST00000555462 CCL18P55774 89 aa12.03□□□□□ -0.48
PPP4R3A-208ENST00000555462 DNAJC30Q96LL9 226 aa12.03□□□□□ -0.48
PPP4R3A-208ENST00000555462 TRRAPQ9Y4A5 3859 aa12.03□□□□□ -0.48
PPP4R3A-208ENST00000555462 IGLV5-45A0A087WSX0 123 aa12.03□□□□□ -0.48
PPP4R3A-208ENST00000555462 A0A096LNT2 108 aa12.02□□□□□ -0.48
PPP4R3A-208ENST00000555462 MALP21145 153 aa12.02□□□□□ -0.48
PPP4R3A-208ENST00000555462 C6orf226Q5I0X4 101 aa12.02□□□□□ -0.48
PPP4R3A-208ENST00000555462 PPDPFQ9H3Y8 114 aa12.02□□□□□ -0.48
PPP4R3A-208ENST00000555462 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
PPP4R3A-208ENST00000555462 C4orf3Q8WVX3 66 aa12.01□□□□□ -0.49
PPP4R3A-208ENST00000555462 A8MTW9 85 aa12.01□□□□□ -0.49
PPP4R3A-208ENST00000555462 TIMM17BO60830 172 aa12.01□□□□□ -0.49
PPP4R3A-208ENST00000555462 HIST1H4AP62805 103 aaKnown RBP12□□□□□ -0.49
PPP4R3A-208ENST00000555462 Q6Q795 121 aa11.99□□□□□ -0.49
PPP4R3A-208ENST00000555462 CYSTM1Q9H1C7 97 aa11.99□□□□□ -0.49
PPP4R3A-208ENST00000555462 BBC3Q96PG8 261 aaPredicted RBP11.99□□□□□ -0.49
PPP4R3A-208ENST00000555462 GIG44P09565 113 aaPredicted RBP11.98□□□□□ -0.49
PPP4R3A-208ENST00000555462 hADV29S1A0JD25 119 aa11.98□□□□□ -0.49
PPP4R3A-208ENST00000555462 LINC00846Q9NV44 126 aa11.98□□□□□ -0.49
PPP4R3A-208ENST00000555462 DNAJC9-AS1A6NH13 148 aa11.96□□□□□ -0.5
PPP4R3A-208ENST00000555462 LINC00643Q86TS7 51 aa11.96□□□□□ -0.5
PPP4R3A-208ENST00000555462 SVIPQ8NHG7 77 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms