RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 KIR2DL4Q99706 377 aa4.96□□□□□ -1.62
ACTN1-212ENST00000554158 TRBV20OR9-2A0A075B6H5 130 aa4.95□□□□□ -1.62
ACTN1-212ENST00000554158 F8WDY8 70 aa4.95□□□□□ -1.62
ACTN1-212ENST00000554158 VCYO14598 125 aa4.95□□□□□ -1.62
ACTN1-212ENST00000554158 FOXA3P55318 350 aaPredicted RBP4.95□□□□□ -1.62
ACTN1-212ENST00000554158 FAM19A5Q7Z5A7 132 aaPredicted RBP4.95□□□□□ -1.62
ACTN1-212ENST00000554158 OR10D4PQ8NGN7 298 aa4.95□□□□□ -1.62
ACTN1-212ENST00000554158 ORAOV1Q8WV07 137 aa4.95□□□□□ -1.62
ACTN1-212ENST00000554158 TRBV27A0A0K0K1C4 114 aa4.94□□□□□ -1.62
ACTN1-212ENST00000554158 TMEM241Q24JQ0 296 aa4.94□□□□□ -1.62
ACTN1-212ENST00000554158 GAGE2EQ4V326 116 aa4.94□□□□□ -1.62
ACTN1-212ENST00000554158 RNASE13Q5GAN3 156 aaKnown RBP4.94□□□□□ -1.62
ACTN1-212ENST00000554158 OCC1Q8TAD7 63 aa4.94□□□□□ -1.62
ACTN1-212ENST00000554158 GAGE2DQ9UEU5 116 aa4.94□□□□□ -1.62
ACTN1-212ENST00000554158 CSDC2Q9Y534 153 aaKnown RBP4.94□□□□□ -1.62
ACTN1-212ENST00000554158 A0A1B0GUT8 65 aa4.93□□□□□ -1.62
ACTN1-212ENST00000554158 M0QXV9 152 aa4.93□□□□□ -1.62
ACTN1-212ENST00000554158 PPP1R2P9O14990 202 aa4.93□□□□□ -1.62
ACTN1-212ENST00000554158 CEBPGP53567 150 aa4.93□□□□□ -1.62
ACTN1-212ENST00000554158 MRPL35Q9NZE8 188 aaKnown RBP4.93□□□□□ -1.62
ACTN1-212ENST00000554158 LPAP08519 4548 aa4.93□□□□□ -1.62
ACTN1-212ENST00000554158 TGIF2-C20orf24A0A0A6YYL0 155 aa4.92□□□□□ -1.62
ACTN1-212ENST00000554158 K7EN84 100 aa4.92□□□□□ -1.62
ACTN1-212ENST00000554158 TCAPO15273 167 aa4.92□□□□□ -1.62
ACTN1-212ENST00000554158 POLR2KP53803 58 aaKnown RBP4.92□□□□□ -1.62
ACTN1-212ENST00000554158 KRTAP9-2Q9BYQ4 174 aa4.92□□□□□ -1.62
ACTN1-212ENST00000554158 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
ACTN1-212ENST00000554158 TMEM191AQ9H0A3 160 aa4.92□□□□□ -1.62
ACTN1-212ENST00000554158 UBE2D4Q9Y2X8 147 aa4.92□□□□□ -1.62
ACTN1-212ENST00000554158 FAM168BA1KXE4 195 aa4.91□□□□□ -1.62
ACTN1-212ENST00000554158 HIGD1CA8MV81 97 aa4.91□□□□□ -1.62
ACTN1-212ENST00000554158 TSPAN13O95857 204 aa4.91□□□□□ -1.62
ACTN1-212ENST00000554158 VPREB1P12018 145 aa4.91□□□□□ -1.62
ACTN1-212ENST00000554158 RAB4AP20338 218 aa4.91□□□□□ -1.62
ACTN1-212ENST00000554158 RIGQ13278 110 aa4.91□□□□□ -1.62
ACTN1-212ENST00000554158 Q6ZUT4 128 aa4.91□□□□□ -1.62
ACTN1-212ENST00000554158 FAM231DQ6ZW35 169 aa4.91□□□□□ -1.62
ACTN1-212ENST00000554158 PACRGQ96M98 296 aaPredicted RBP4.91□□□□□ -1.62
ACTN1-212ENST00000554158 TIMM21Q9BVV7 248 aa4.91□□□□□ -1.62
ACTN1-212ENST00000554158 CARHSP1Q9Y2V2 147 aaKnown RBP4.91□□□□□ -1.62
ACTN1-212ENST00000554158 IFITM10A6NMD0 228 aa4.9□□□□□ -1.63
ACTN1-212ENST00000554158 TLX1NBP0CAT3 122 aa4.9□□□□□ -1.63
ACTN1-212ENST00000554158 HBBP68871 147 aa4.9□□□□□ -1.63
ACTN1-212ENST00000554158 AMN1Q8IY45 258 aa4.9□□□□□ -1.63
ACTN1-212ENST00000554158 TMEM250H0YL14 139 aa4.89□□□□□ -1.63
ACTN1-212ENST00000554158 SMKR1H3BMG3 65 aa4.89□□□□□ -1.63
ACTN1-212ENST00000554158 UNQ6190/PRO20217Q6UXQ8 127 aa4.89□□□□□ -1.63
ACTN1-212ENST00000554158 SMDT1Q9H4I9 107 aa4.89□□□□□ -1.63
ACTN1-212ENST00000554158 SPANXA1Q9NS26 97 aa4.89□□□□□ -1.63
ACTN1-212ENST00000554158 TRBV30A0A0K0K1B3 111 aa4.88□□□□□ -1.63
ACTN1-212ENST00000554158 NUPR1O60356 82 aa4.88□□□□□ -1.63
ACTN1-212ENST00000554158 PRSS2P07478 247 aa4.88□□□□□ -1.63
ACTN1-212ENST00000554158 SLC51BQ86UW2 128 aa4.88□□□□□ -1.63
ACTN1-212ENST00000554158 SMIM7Q9BQ49 75 aa4.88□□□□□ -1.63
ACTN1-212ENST00000554158 C6orf48Q9UBA6 75 aa4.88□□□□□ -1.63
ACTN1-212ENST00000554158 NDUFC2-KCTD14E9PQ53 114 aa4.87□□□□□ -1.63
ACTN1-212ENST00000554158 ZNF861PO60384 105 aa4.87□□□□□ -1.63
ACTN1-212ENST00000554158 KRTAP1-4P0C5Y4 121 aa4.87□□□□□ -1.63
ACTN1-212ENST00000554158 CKS2P33552 79 aa4.87□□□□□ -1.63
ACTN1-212ENST00000554158 IFI27P40305 119 aaPredicted RBP4.87□□□□□ -1.63
ACTN1-212ENST00000554158 RPL28P46779 137 aaKnown RBP4.87□□□□□ -1.63
ACTN1-212ENST00000554158 LBHQ53QV2 105 aaPredicted RBP4.87□□□□□ -1.63
ACTN1-212ENST00000554158 C10orf25Q5T742 122 aa4.87□□□□□ -1.63
ACTN1-212ENST00000554158 TYMSOSQ8TAI1 123 aa4.87□□□□□ -1.63
ACTN1-212ENST00000554158 C20orf78Q9BR46 151 aa4.87□□□□□ -1.63
ACTN1-212ENST00000554158 EIF5A2Q9GZV4 153 aaKnown RBP4.87□□□□□ -1.63
ACTN1-212ENST00000554158 IGHV3OR16-9A0A0B4J2B5 98 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 LINC00862A6NCI5 91 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 ZNF727A8MUV8 499 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 CRYGAP11844 174 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 RAB5AP20339 215 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 CKS1BP61024 79 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 RPL39P62891 51 aaKnown RBP4.86□□□□□ -1.63
ACTN1-212ENST00000554158 KRTAP11-1Q8IUC1 163 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 NRACQ8N912 160 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 C2orf88Q9BSF0 95 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 OSTCQ9NRP0 149 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 NAT8BQ9UHF3 227 aa4.86□□□□□ -1.63
ACTN1-212ENST00000554158 F8W036 122 aa4.85□□□□□ -1.63
ACTN1-212ENST00000554158 S100A8P05109 93 aa4.85□□□□□ -1.63
ACTN1-212ENST00000554158 MRPS36P82909 103 aaKnown RBP4.85□□□□□ -1.63
ACTN1-212ENST00000554158 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.63
ACTN1-212ENST00000554158 A0A1B0GW15 77 aa4.84□□□□□ -1.63
ACTN1-212ENST00000554158 S100A1P23297 94 aa4.84□□□□□ -1.63
ACTN1-212ENST00000554158 MRPL51Q4U2R6 128 aaKnown RBP4.84□□□□□ -1.63
ACTN1-212ENST00000554158 FAM104BQ5XKR9 115 aa4.84□□□□□ -1.63
ACTN1-212ENST00000554158 Q6ZN92 141 aa4.84□□□□□ -1.63
ACTN1-212ENST00000554158 LINC01551Q86U37 167 aa4.84□□□□□ -1.63
ACTN1-212ENST00000554158 SMIM2Q9BVW6 85 aa4.84□□□□□ -1.63
ACTN1-212ENST00000554158 TOMM7Q9P0U1 55 aa4.84□□□□□ -1.63
ACTN1-212ENST00000554158 TRBV24-1A0A075B6N3 115 aa4.83□□□□□ -1.64
ACTN1-212ENST00000554158 RPL32P62910 135 aaKnown RBP4.83□□□□□ -1.64
ACTN1-212ENST00000554158 C6orf226Q5I0X4 101 aa4.83□□□□□ -1.64
ACTN1-212ENST00000554158 C2orf82Q6UX34 121 aa4.83□□□□□ -1.64
ACTN1-212ENST00000554158 TEX43Q6ZNM6 134 aa4.83□□□□□ -1.64
ACTN1-212ENST00000554158 LINC00469Q8N7U9 141 aa4.83□□□□□ -1.64
ACTN1-212ENST00000554158 TMEM141Q96I45 108 aa4.83□□□□□ -1.64
ACTN1-212ENST00000554158 D6R8Y8 96 aa4.82□□□□□ -1.64
ACTN1-212ENST00000554158 UBE2AP49459 152 aa4.82□□□□□ -1.64
ACTN1-212ENST00000554158 C9orf129Q5T035 196 aaKnown RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms