RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 IGHV1-8P0DP01 117 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 MINOS1Q5TGZ0 78 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 Q86TA4 180 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 ZNF625Q96I27 306 aaPredicted RBP2.92□□□□□ -1.94
RDH11-204ENST00000553578 MINOS1-NBL1R4GNA1 71 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 S4R3C0 116 aa2.92□□□□□ -1.94
RDH11-204ENST00000553578 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.91□□□□□ -1.945e-6■■■□□ 19
RDH11-204ENST00000553578 IGKV2D-30A0A075B6S6 120 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 A0A096LNT2 108 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 IGHV7-81A0A0B4J1V7 117 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 M0R378 163 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 UBE2BP63146 152 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 ESRGQ1W209 222 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 C10orf55Q5SWW7 151 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 ADAMTSL4-AS1Q5T5F5 129 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 ITLN2Q8WWU7 325 aaPredicted RBP2.91□□□□□ -1.94
RDH11-204ENST00000553578 CEP295Q9C0D2 2601 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 TM2D3Q9BRN9 247 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 IGHV3OR16-8A0A075B7F1 116 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 TRAV12-1A0A0B4J245 112 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 I3L3M4 83 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 BLCAPP62952 87 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 SCXQ7RTU7 201 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 TMEM14CQ9P0S9 112 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 AKAP13Q12802 2813 aa2.91□□□□□ -1.94
RDH11-204ENST00000553578 IGKV1D-37A0A075B6S9 117 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 FAM229BQ4G0N7 80 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 DEFB104AQ8WTQ1 72 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 U3KQK5 164 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 PTPRQQ9UMZ3 2332 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 BUB1B-PAK6H3BSN5 160 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 LUZP6Q538Z0 58 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 ENHOQ6UWT2 76 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 FAM167A-AS1Q96KT0 104 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 CCL13Q99616 98 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 C14orf132Q9NPU4 83 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 UBE2D4Q9Y2X8 147 aa2.9□□□□□ -1.94
RDH11-204ENST00000553578 MALRD1Q5VYJ5 2156 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 TRAV7A0A075B6U4 112 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 IGHV1OR15-1A0A075B7D0 117 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 IGHV3-35A0A0C4DH35 117 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 KRTAP16-1A8MUX0 517 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 NDUFC1O43677 76 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 GAS8-AS1O95177 125 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 TRBV12-3P01733 135 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 IGKV1-16P04430 117 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 CHCHD10Q8WYQ3 142 aaPredicted RBP2.9□□□□□ -1.95
RDH11-204ENST00000553578 CSMD1Q96PZ7 3565 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 TRAV13-2A0A0B4J235 113 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 IGKV2-30P06310 120 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 DYNLRB2Q8TF09 96 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 CAMK2N2Q96S95 79 aa2.9□□□□□ -1.95
RDH11-204ENST00000553578 RELNP78509 3460 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 C11orf86A6NJI1 115 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 RPL28P46779 137 aaKnown RBP2.89□□□□□ -1.95
RDH11-204ENST00000553578 C9orf66Q5T8R8 295 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 C16orf74Q96GX8 76 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 LINC00846Q9NV44 126 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 IGLV8-61A0A075B6I0 122 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 H0Y9J4 135 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 SOCS3O14543 225 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 PRB2P02812 416 aaPredicted RBP2.89□□□□□ -1.95
RDH11-204ENST00000553578 CMC4P56277 68 aaPredicted RBP2.89□□□□□ -1.95
RDH11-204ENST00000553578 LYZP61626 148 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 RPL36AP83881 106 aaKnown RBP2.89□□□□□ -1.95
RDH11-204ENST00000553578 ASH1LQ9NR48 2969 aaKnown RBP2.89□□□□□ -1.95
RDH11-204ENST00000553578 C2CD3Q4AC94 2353 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 LRBAP50851 2863 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 IGKV1OR2-108A0A075B7D4 117 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 A8MUN3 132 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 I3L2K1 104 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 LINC00476Q8WZB0 136 aa2.89□□□□□ -1.95
RDH11-204ENST00000553578 MIFP14174 115 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 COX6B1P14854 86 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 CCL3L1P16619 93 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 LMO4P61968 165 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 RNASE13Q5GAN3 156 aaKnown RBP2.88□□□□□ -1.95
RDH11-204ENST00000553578 LYPD2Q6UXB3 125 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 Q8N2B8 174 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 PHLDA3Q9Y5J5 127 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 IGHV1-3A0A0C4DH29 117 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 H3BUA1 57 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 SAA1P0DJI8 122 aaPredicted RBP2.88□□□□□ -1.95
RDH11-204ENST00000553578 ZNF80P51504 273 aaPredicted RBP2.88□□□□□ -1.95
RDH11-204ENST00000553578 LYPD1Q8N2G4 141 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 CCL17Q92583 94 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 TLN1Q9Y490 2541 aaKnown RBP2.88□□□□□ -1.95
RDH11-204ENST00000553578 COL12A1Q99715 3063 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 ZZEF1O43149 2961 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 A0A1W2PPR1 153 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 IGLV2-11P01706 119 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 TSPEAR-AS2P59090 65 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 ERHP84090 104 aaKnown RBP2.88□□□□□ -1.95
RDH11-204ENST00000553578 LCA10Q71F78 164 aa2.88□□□□□ -1.95
RDH11-204ENST00000553578 SETD2Q9BYW2 2564 aaPredicted RBP2.87□□□□□ -1.95
RDH11-204ENST00000553578 IGHV3-74A0A0B4J1X5 117 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 LINC01546A6NGU7 62 aa2.87□□□□□ -1.95
RDH11-204ENST00000553578 CHKB-CPT1BH3BT56 60 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms