RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 ATP5EP56381 51 aaPredicted RBP11.67□□□□□ -0.54
RBFOX1-212ENST00000550418 WFDC11Q8NEX6 87 aa11.67□□□□□ -0.54
RBFOX1-212ENST00000550418 C9orf85Q96MD7 179 aa11.67□□□□□ -0.54
RBFOX1-212ENST00000550418 PSMG3-AS1Q96PY0 264 aa11.67□□□□□ -0.54
RBFOX1-212ENST00000550418 C4orf3Q8WVX3 66 aa11.66□□□□□ -0.54
RBFOX1-212ENST00000550418 HRCT1Q6UXD1 115 aa11.66□□□□□ -0.54
RBFOX1-212ENST00000550418 SMIM11BQ8TCY0 68 aa11.66□□□□□ -0.54
RBFOX1-212ENST00000550418 CLPSL1A2RUU4 121 aa11.66□□□□□ -0.54
RBFOX1-212ENST00000550418 TNFRSF13BO14836 293 aaPredicted RBP11.65□□□□□ -0.54
RBFOX1-212ENST00000550418 LINC00269Q8N2A0 174 aa11.65□□□□□ -0.54
RBFOX1-212ENST00000550418 DOPEY1Q5JWR5 2465 aa11.65□□□□□ -0.54
RBFOX1-212ENST00000550418 IGLV2-18A0A075B6J9 118 aa11.65□□□□□ -0.54
RBFOX1-212ENST00000550418 SPTSSBQ8NFR3 76 aa11.64□□□□□ -0.55
RBFOX1-212ENST00000550418 PLA2G2AP14555 144 aa11.63□□□□□ -0.55
RBFOX1-212ENST00000550418 REG3AQ06141 175 aa11.63□□□□□ -0.55
RBFOX1-212ENST00000550418 CHCHD10Q8WYQ3 142 aaPredicted RBP11.62□□□□□ -0.55
RBFOX1-212ENST00000550418 MTORP42345 2549 aa11.62□□□□□ -0.55
RBFOX1-212ENST00000550418 Q6ZSV7 163 aa11.62□□□□□ -0.55
RBFOX1-212ENST00000550418 TRBV6-8A0A0A6YYG3 113 aa11.62□□□□□ -0.55
RBFOX1-212ENST00000550418 FAM19A5Q7Z5A7 132 aaPredicted RBP11.62□□□□□ -0.55
RBFOX1-212ENST00000550418 SMIM26A0A096LP01 95 aa11.61□□□□□ -0.55
RBFOX1-212ENST00000550418 C19orf84I3L1E1 186 aa11.61□□□□□ -0.55
RBFOX1-212ENST00000550418 MRPL55Q7Z7F7 128 aaKnown RBP11.61□□□□□ -0.55
RBFOX1-212ENST00000550418 DEFB4AO15263 64 aa11.61□□□□□ -0.55
RBFOX1-212ENST00000550418 PRRC2AP48634 2157 aaKnown RBP11.6□□□□□ -0.55
RBFOX1-212ENST00000550418 A0A087WVE0 104 aa11.6□□□□□ -0.55
RBFOX1-212ENST00000550418 DEFB135Q30KP9 77 aa11.6□□□□□ -0.55
RBFOX1-212ENST00000550418 DEFB114Q30KQ6 69 aa11.6□□□□□ -0.55
RBFOX1-212ENST00000550418 Q6ZQY7 126 aa11.6□□□□□ -0.55
RBFOX1-212ENST00000550418 FAM19A3Q7Z5A8 133 aa11.6□□□□□ -0.55
RBFOX1-212ENST00000550418 C9orf66Q5T8R8 295 aa11.59□□□□□ -0.55
RBFOX1-212ENST00000550418 CHKB-CPT1BH3BT56 60 aa11.59□□□□□ -0.55
RBFOX1-212ENST00000550418 CCKP06307 115 aa11.59□□□□□ -0.55
RBFOX1-212ENST00000550418 TRBV6-4A0A1B0GX49 114 aa11.59□□□□□ -0.55
RBFOX1-212ENST00000550418 FN1P02751 2386 aaKnown RBP11.59□□□□□ -0.55
RBFOX1-212ENST00000550418 ADAMTSL4-AS1Q5T5F5 129 aa11.58□□□□□ -0.56
RBFOX1-212ENST00000550418 KLK5Q9Y337 293 aaPredicted RBP11.58□□□□□ -0.56
RBFOX1-212ENST00000550418 CCL18P55774 89 aa11.58□□□□□ -0.56
RBFOX1-212ENST00000550418 LINC00242Q5T6M2 205 aa11.57□□□□□ -0.56
RBFOX1-212ENST00000550418 DCANP1Q8TF63 244 aa11.57□□□□□ -0.56
RBFOX1-212ENST00000550418 XAGE1AQ9HD64 81 aa11.57□□□□□ -0.56
RBFOX1-212ENST00000550418 CDSNQ15517 529 aa11.56□□□□□ -0.56
RBFOX1-212ENST00000550418 PKD1L2Q7Z442 2459 aa11.56□□□□□ -0.56
RBFOX1-212ENST00000550418 CPAMD8Q8IZJ3 1885 aa11.56□□□□□ -0.56
RBFOX1-212ENST00000550418 RPL28P46779 137 aaKnown RBP11.56□□□□□ -0.56
RBFOX1-212ENST00000550418 C1orf195Q5TG92 126 aa11.56□□□□□ -0.56
RBFOX1-212ENST00000550418 ZNF580Q9UK33 172 aa11.55□□□□□ -0.56
RBFOX1-212ENST00000550418 SERP1Q9Y6X1 66 aa11.55□□□□□ -0.56
RBFOX1-212ENST00000550418 CFAP54Q96N23 3096 aa11.55□□□□□ -0.56
RBFOX1-212ENST00000550418 TRAV7A0A075B6U4 112 aa11.55□□□□□ -0.56
RBFOX1-212ENST00000550418 F8W735 103 aaPredicted RBP11.55□□□□□ -0.56
RBFOX1-212ENST00000550418 SMCPP49901 116 aaPredicted RBP11.55□□□□□ -0.56
RBFOX1-212ENST00000550418 C10orf99Q6UWK7 81 aa11.54□□□□□ -0.56
RBFOX1-212ENST00000550418 PRO0461Q9UI25 63 aa11.54□□□□□ -0.56
RBFOX1-212ENST00000550418 LOC107984640A0A0U1RRK4 108 aa11.54□□□□□ -0.56
RBFOX1-212ENST00000550418 WDFY4Q6ZS81 3184 aa11.54□□□□□ -0.56
RBFOX1-212ENST00000550418 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
RBFOX1-212ENST00000550418 PRM2P04554 102 aa11.54□□□□□ -0.56
RBFOX1-212ENST00000550418 CDC42SE2Q9NRR3 84 aa11.54□□□□□ -0.56
RBFOX1-212ENST00000550418 SHISA2Q6UWI4 295 aa11.53□□□□□ -0.56
RBFOX1-212ENST00000550418 PPDPFQ9H3Y8 114 aa11.53□□□□□ -0.56
RBFOX1-212ENST00000550418 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
RBFOX1-212ENST00000550418 TRBV7-7A0A0K0K1E9 115 aa11.52□□□□□ -0.56
RBFOX1-212ENST00000550418 H0Y9J4 135 aa11.52□□□□□ -0.56
RBFOX1-212ENST00000550418 CSDC2Q9Y534 153 aaKnown RBP11.52□□□□□ -0.57
RBFOX1-212ENST00000550418 C3orf84H3BNL1 204 aa11.52□□□□□ -0.57
RBFOX1-212ENST00000550418 MIFP14174 115 aa11.52□□□□□ -0.57
RBFOX1-212ENST00000550418 AMELXQ99217 191 aa11.52□□□□□ -0.57
RBFOX1-212ENST00000550418 C11orf71Q6IPW1 123 aa11.51□□□□□ -0.57
RBFOX1-212ENST00000550418 NTM-AS1Q6ZSK4 140 aa11.51□□□□□ -0.57
RBFOX1-212ENST00000550418 C1orf158Q8N1D5 194 aa11.51□□□□□ -0.57
RBFOX1-212ENST00000550418 SZT2Q5T011 3432 aa11.51□□□□□ -0.57
RBFOX1-212ENST00000550418 INAFM1C9JVW0 142 aa11.51□□□□□ -0.57
RBFOX1-212ENST00000550418 LINC00959A0A1B0GUT2 108 aa11.5□□□□□ -0.57
RBFOX1-212ENST00000550418 CD164L2Q6UWJ8 174 aa11.5□□□□□ -0.57
RBFOX1-212ENST00000550418 EXPH5Q8NEV8 1989 aa11.5□□□□□ -0.57
RBFOX1-212ENST00000550418 UBE2AP49459 152 aa11.49□□□□□ -0.57
RBFOX1-212ENST00000550418 ACANP16112 2415 aa11.48□□□□□ -0.57
RBFOX1-212ENST00000550418 LINC01546A6NGU7 62 aa11.48□□□□□ -0.57
RBFOX1-212ENST00000550418 IGLV1-40P01703 118 aa11.48□□□□□ -0.57
RBFOX1-212ENST00000550418 CHCHD7Q9BUK0 85 aa11.48□□□□□ -0.57
RBFOX1-212ENST00000550418 A0A087WYN8 130 aa11.47□□□□□ -0.57
RBFOX1-212ENST00000550418 LOC100131303A0A0U1RQF7 123 aa11.47□□□□□ -0.57
RBFOX1-212ENST00000550418 LYRM9A8MSI8 78 aa11.47□□□□□ -0.57
RBFOX1-212ENST00000550418 Q6YL49 198 aa11.47□□□□□ -0.57
RBFOX1-212ENST00000550418 TET2Q6N021 2002 aaPredicted RBP11.46□□□□□ -0.57
RBFOX1-212ENST00000550418 COX6A2Q02221 97 aa11.46□□□□□ -0.57
RBFOX1-212ENST00000550418 PRR4Q16378 134 aa11.46□□□□□ -0.58
RBFOX1-212ENST00000550418 HIGD2AQ9BW72 106 aa11.46□□□□□ -0.58
RBFOX1-212ENST00000550418 Q8IZM0 81 aa11.46□□□□□ -0.58
RBFOX1-212ENST00000550418 Q8N814 137 aa11.45□□□□□ -0.58
RBFOX1-212ENST00000550418 COX17Q14061 63 aa11.45□□□□□ -0.58
RBFOX1-212ENST00000550418 MRGPRG-AS1Q2M3A8 158 aa11.45□□□□□ -0.58
RBFOX1-212ENST00000550418 COL4A2P08572 1712 aa11.44□□□□□ -0.58
RBFOX1-212ENST00000550418 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.44□□□□□ -0.58
RBFOX1-212ENST00000550418 LINC00846Q9NV44 126 aa11.44□□□□□ -0.58
RBFOX1-212ENST00000550418 SOSTDC1Q6X4U4 206 aa11.44□□□□□ -0.58
RBFOX1-212ENST00000550418 COL5A1P20908 1838 aaPredicted RBP11.44□□□□□ -0.58
RBFOX1-212ENST00000550418 IGKV4-1P06312 121 aa11.43□□□□□ -0.58
RBFOX1-212ENST00000550418 WFDC10BQ8IUB3 73 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms