RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 TRAV8-3A0A0A6YYJ7 113 aa13.24□□□□□ -0.29
SKP2-208ENST00000546211 MYMXA0A1B0GTQ4 84 aa13.24□□□□□ -0.29
SKP2-208ENST00000546211 MAPKAPK5-AS1Q8N8E1 139 aa13.24□□□□□ -0.29
SKP2-208ENST00000546211 MRPS16Q9Y3D3 137 aaKnown RBP13.24□□□□□ -0.29
SKP2-208ENST00000546211 MEGF8Q7Z7M0 2845 aa13.23□□□□□ -0.29
SKP2-208ENST00000546211 SIVA1O15304 175 aa13.23□□□□□ -0.29
SKP2-208ENST00000546211 CTAG1AP78358 180 aa13.23□□□□□ -0.29
SKP2-208ENST00000546211 LINC00588Q9Y4M8 146 aa13.23□□□□□ -0.29
SKP2-208ENST00000546211 COL7A1Q02388 2944 aa13.23□□□□□ -0.29
SKP2-208ENST00000546211 NUPR2A6NF83 97 aa13.22□□□□□ -0.29
SKP2-208ENST00000546211 ZNF815PA8K554 130 aa13.22□□□□□ -0.29
SKP2-208ENST00000546211 TSPEAR-AS2P59090 65 aa13.22□□□□□ -0.29
SKP2-208ENST00000546211 PRR34Q9NV39 138 aa13.22□□□□□ -0.29
SKP2-208ENST00000546211 CRPP02741 224 aa13.21□□□□□ -0.29
SKP2-208ENST00000546211 XCL1P47992 114 aa13.21□□□□□ -0.29
SKP2-208ENST00000546211 LINC01556Q5JQF7 62 aa13.21□□□□□ -0.29
SKP2-208ENST00000546211 C2orf91Q6ZV80 131 aa13.21□□□□□ -0.29
SKP2-208ENST00000546211 KLK5Q9Y337 293 aaPredicted RBP13.21□□□□□ -0.29
SKP2-208ENST00000546211 IGHV3OR16-9A0A0B4J2B5 98 aa13.2□□□□□ -0.3
SKP2-208ENST00000546211 SMIM1B2RUZ4 78 aa13.2□□□□□ -0.3
SKP2-208ENST00000546211 CHCHD10Q8WYQ3 142 aaPredicted RBP13.2□□□□□ -0.3
SKP2-208ENST00000546211 IGLV5-39A0A0G2JS06 123 aa13.19□□□□□ -0.3
SKP2-208ENST00000546211 UBE2WQ96B02 151 aa13.19□□□□□ -0.3
SKP2-208ENST00000546211 APLNQ9ULZ1 77 aa13.19□□□□□ -0.3
SKP2-208ENST00000546211 IGLV10-54A0A075B6I4 117 aa13.18□□□□□ -0.3
SKP2-208ENST00000546211 A0A087WZ39 114 aa13.18□□□□□ -0.3
SKP2-208ENST00000546211 DNAH10OSP0CZ25 163 aa13.18□□□□□ -0.3
SKP2-208ENST00000546211 CD164L2Q6UWJ8 174 aa13.18□□□□□ -0.3
SKP2-208ENST00000546211 ENHOQ6UWT2 76 aa13.18□□□□□ -0.3
SKP2-208ENST00000546211 HIGD1BQ9P298 99 aa13.18□□□□□ -0.3
SKP2-208ENST00000546211 PRKDCP78527 4128 aaKnown RBP13.18□□□□□ -0.3
SKP2-208ENST00000546211 SCGB1D4Q6XE38 83 aa13.17□□□□□ -0.3
SKP2-208ENST00000546211 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
SKP2-208ENST00000546211 STAB2Q8WWQ8 2551 aa13.17□□□□□ -0.3
SKP2-208ENST00000546211 TRAV8-4A0A0B4J246 113 aa13.16□□□□□ -0.3
SKP2-208ENST00000546211 UPK3BQ9BT76 320 aa13.16□□□□□ -0.3
SKP2-208ENST00000546211 MIAQ16674 131 aa13.15□□□□□ -0.3
SKP2-208ENST00000546211 ZFAND6Q6FIF0 208 aa13.15□□□□□ -0.3
SKP2-208ENST00000546211 LINC01561Q8N1V8 128 aa13.15□□□□□ -0.3
SKP2-208ENST00000546211 NDUFA12Q9UI09 145 aa13.15□□□□□ -0.3
SKP2-208ENST00000546211 M0R143 59 aa13.14□□□□□ -0.31
SKP2-208ENST00000546211 COX7A2LO14548 114 aa13.14□□□□□ -0.31
SKP2-208ENST00000546211 UBE2DNLQ8IWF7 75 aa13.13□□□□□ -0.31
SKP2-208ENST00000546211 GAGE12HA6NDE8 117 aa13.12□□□□□ -0.31
SKP2-208ENST00000546211 HINT1P49773 126 aaPredicted RBP13.11□□□□□ -0.31
SKP2-208ENST00000546211 HSD52Q0P140 79 aa13.11□□□□□ -0.31
SKP2-208ENST00000546211 FOXI1Q12951 378 aa13.11□□□□□ -0.31
SKP2-208ENST00000546211 COX7B2Q8TF08 81 aa13.11□□□□□ -0.31
SKP2-208ENST00000546211 MALP21145 153 aa13.11□□□□□ -0.31
SKP2-208ENST00000546211 SNHG12Q9BXW3 62 aa13.11□□□□□ -0.31
SKP2-208ENST00000546211 TOMM7Q9P0U1 55 aa13.11□□□□□ -0.31
SKP2-208ENST00000546211 NDUFA1O15239 70 aa13.1□□□□□ -0.31
SKP2-208ENST00000546211 BATFQ16520 125 aa13.1□□□□□ -0.31
SKP2-208ENST00000546211 Q9H8V8 135 aa13.1□□□□□ -0.31
SKP2-208ENST00000546211 C10orf126Q8N4M7 172 aa13.09□□□□□ -0.31
SKP2-208ENST00000546211 A0A0J9YXY3 114 aa13.08□□□□□ -0.32
SKP2-208ENST00000546211 EREGO14944 169 aa13.08□□□□□ -0.32
SKP2-208ENST00000546211 HIST1H4GQ99525 98 aa13.08□□□□□ -0.32
SKP2-208ENST00000546211 C1orf43Q9BWL3 253 aa13.08□□□□□ -0.32
SKP2-208ENST00000546211 TAL2Q16559 108 aa13.07□□□□□ -0.32
SKP2-208ENST00000546211 IBA57-AS1B1ANH7 110 aa13.07□□□□□ -0.32
SKP2-208ENST00000546211 APOMO95445 188 aa13.07□□□□□ -0.32
SKP2-208ENST00000546211 PRSS2P07478 247 aa13.07□□□□□ -0.32
SKP2-208ENST00000546211 BVES-AS1Q5T3Y7 98 aa13.06□□□□□ -0.32
SKP2-208ENST00000546211 Q8IZM0 81 aa13.06□□□□□ -0.32
SKP2-208ENST00000546211 ORAOV1Q8WV07 137 aa13.06□□□□□ -0.32
SKP2-208ENST00000546211 TMEM238C9JI98 176 aa13.05□□□□□ -0.32
SKP2-208ENST00000546211 K7EP13 123 aa13.05□□□□□ -0.32
SKP2-208ENST00000546211 HERV-K104P63124 156 aa13.05□□□□□ -0.32
SKP2-208ENST00000546211 SRSF9Q13242 221 aaKnown RBP eCLIP13.05□□□□□ -0.32
SKP2-208ENST00000546211 C6orf226Q5I0X4 101 aa13.05□□□□□ -0.32
SKP2-208ENST00000546211 ZNF625Q96I27 306 aaPredicted RBP13.05□□□□□ -0.32
SKP2-208ENST00000546211 SPANXB1Q9NS25 103 aaPredicted RBP13.05□□□□□ -0.32
SKP2-208ENST00000546211 IGKV2D-24A0A075B6R9 120 aa13.04□□□□□ -0.32
SKP2-208ENST00000546211 SFTA2Q6UW10 78 aa13.04□□□□□ -0.32
SKP2-208ENST00000546211 Q9HAA7 133 aa13.04□□□□□ -0.32
SKP2-208ENST00000546211 DYNC2H1Q8NCM8 4307 aaKnown RBP13.04□□□□□ -0.32
SKP2-208ENST00000546211 GCSHP23434 173 aa13.03□□□□□ -0.32
SKP2-208ENST00000546211 CFAP161Q6P656 301 aa13.03□□□□□ -0.32
SKP2-208ENST00000546211 KRTAP26-1Q6PEX3 210 aa13.03□□□□□ -0.32
SKP2-208ENST00000546211 CEND1Q8N111 149 aa13.03□□□□□ -0.32
SKP2-208ENST00000546211 MUC7Q8TAX7 377 aa13.03□□□□□ -0.32
SKP2-208ENST00000546211 CIRBPQ14011 172 aaKnown RBP13.02□□□□□ -0.33
SKP2-208ENST00000546211 LBHQ53QV2 105 aaPredicted RBP13.02□□□□□ -0.33
SKP2-208ENST00000546211 RMI2Q96E14 147 aa13.02□□□□□ -0.33
SKP2-208ENST00000546211 TIMM17BO60830 172 aa13.01□□□□□ -0.33
SKP2-208ENST00000546211 FBN3Q75N90 2809 aa13.01□□□□□ -0.33
SKP2-208ENST00000546211 MEIG1Q5JSS6 88 aa13□□□□□ -0.33
SKP2-208ENST00000546211 TM2D2Q9BX73 214 aa13□□□□□ -0.33
SKP2-208ENST00000546211 CXCL5P42830 114 aa12.99□□□□□ -0.33
SKP2-208ENST00000546211 PTTG1IPP53801 180 aa12.99□□□□□ -0.33
SKP2-208ENST00000546211 CKS1BP61024 79 aa12.99□□□□□ -0.33
SKP2-208ENST00000546211 WWC2-AS2Q96NR7 200 aa12.99□□□□□ -0.33
SKP2-208ENST00000546211 SPAG11BQ08648 103 aa12.98□□□□□ -0.33
SKP2-208ENST00000546211 KIAA0087Q14695 138 aa12.98□□□□□ -0.33
SKP2-208ENST00000546211 COL5A1-AS1Q5SY13 56 aa12.98□□□□□ -0.33
SKP2-208ENST00000546211 LITAFQ99732 161 aa12.98□□□□□ -0.33
SKP2-208ENST00000546211 A6NDN8 102 aa12.97□□□□□ -0.33
SKP2-208ENST00000546211 FXYD2P54710 66 aa12.97□□□□□ -0.33
SKP2-208ENST00000546211 Q6ZVH6 145 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms