RNA–Protein interactions for RNA: ENST00000545450.6

MSLN-202, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-202ENST00000545450 RBMY1BA6NDE4 496 aaKnown RBP13.48□□□□□ -0.25
MSLN-202ENST00000545450 RBMY1EA6NEQ0 496 aaKnown RBP13.48□□□□□ -0.25
MSLN-202ENST00000545450 IGHV3-53P01767 116 aa13.48□□□□□ -0.25
MSLN-202ENST00000545450 RBMY1DP0C7P1 496 aaKnown RBP13.48□□□□□ -0.25
MSLN-202ENST00000545450 CIRBPQ14011 172 aaKnown RBP13.48□□□□□ -0.25
MSLN-202ENST00000545450 LINC00308Q8TCZ7 52 aa13.48□□□□□ -0.25
MSLN-202ENST00000545450 TRAV25A0A0B4J276 109 aa13.47□□□□□ -0.25
MSLN-202ENST00000545450 IGHV3-38A0A0C4DH36 116 aa13.47□□□□□ -0.25
MSLN-202ENST00000545450 IGLV5-39A0A0G2JS06 123 aa13.47□□□□□ -0.25
MSLN-202ENST00000545450 TENM1Q9UKZ4 2725 aa13.46□□□□□ -0.25
MSLN-202ENST00000545450 BAHCC1Q9P281 2608 aa13.46□□□□□ -0.26
MSLN-202ENST00000545450 NACAE9PAV3 2078 aa13.45□□□□□ -0.26
MSLN-202ENST00000545450 COX6A2Q02221 97 aa13.45□□□□□ -0.26
MSLN-202ENST00000545450 ODF3L2Q3SX64 289 aa13.45□□□□□ -0.26
MSLN-202ENST00000545450 BEAN1Q3B7T3 259 aa13.45□□□□□ -0.26
MSLN-202ENST00000545450 C11orf72Q8NBR9 251 aa13.45□□□□□ -0.26
MSLN-202ENST00000545450 ACYP1P07311 99 aa13.44□□□□□ -0.26
MSLN-202ENST00000545450 Q9H8V8 135 aa13.44□□□□□ -0.26
MSLN-202ENST00000545450 IGHV3OR16-12A0A075B7B8 117 aa13.44□□□□□ -0.26
MSLN-202ENST00000545450 COX7A2LO14548 114 aa13.44□□□□□ -0.26
MSLN-202ENST00000545450 SHISA2Q6UWI4 295 aa13.44□□□□□ -0.26
MSLN-202ENST00000545450 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
MSLN-202ENST00000545450 HERVK_113P63121 156 aa13.42□□□□□ -0.26
MSLN-202ENST00000545450 LINC00242Q5T6M2 205 aa13.42□□□□□ -0.26
MSLN-202ENST00000545450 VWFP04275 2813 aa13.42□□□□□ -0.26
MSLN-202ENST00000545450 RS1O15537 224 aa13.42□□□□□ -0.26
MSLN-202ENST00000545450 DGAT2L7PQ6IED9 249 aa13.42□□□□□ -0.26
MSLN-202ENST00000545450 FAM19A3Q7Z5A8 133 aa13.41□□□□□ -0.26
MSLN-202ENST00000545450 IMUPQ9GZP8 106 aa13.41□□□□□ -0.26
MSLN-202ENST00000545450 IGLV1-51P01701 117 aa13.41□□□□□ -0.26
MSLN-202ENST00000545450 SOSTDC1Q6X4U4 206 aa13.41□□□□□ -0.26
MSLN-202ENST00000545450 COPS9Q8WXC6 57 aa13.41□□□□□ -0.26
MSLN-202ENST00000545450 CHCHD5Q9BSY4 110 aa13.4□□□□□ -0.26
MSLN-202ENST00000545450 ATRQ13535 2644 aa13.4□□□□□ -0.26
MSLN-202ENST00000545450 MEIG1Q5JSS6 88 aa13.39□□□□□ -0.27
MSLN-202ENST00000545450 LINC01587Q99440 93 aa13.39□□□□□ -0.27
MSLN-202ENST00000545450 SMIM1B2RUZ4 78 aa13.39□□□□□ -0.27
MSLN-202ENST00000545450 ZNF625Q96I27 306 aaPredicted RBP13.39□□□□□ -0.27
MSLN-202ENST00000545450 TEP1Q99973 2627 aaKnown RBP13.39□□□□□ -0.27
MSLN-202ENST00000545450 PF4P02776 101 aa13.38□□□□□ -0.27
MSLN-202ENST00000545450 LINC00482Q8N8I6 264 aa13.38□□□□□ -0.27
MSLN-202ENST00000545450 TRACP01848 142 aa13.38□□□□□ -0.27
MSLN-202ENST00000545450 A0A0U1RRA0 63 aa13.37□□□□□ -0.27
MSLN-202ENST00000545450 CYSRT1A8MQ03 144 aa13.36□□□□□ -0.27
MSLN-202ENST00000545450 FAM110AQ9BQ89 295 aa13.36□□□□□ -0.27
MSLN-202ENST00000545450 CSDC2Q9Y534 153 aaKnown RBP13.36□□□□□ -0.27
MSLN-202ENST00000545450 LINC00694P0DN24 101 aa13.35□□□□□ -0.27
MSLN-202ENST00000545450 SDIM1Q6ZPB5 146 aa13.35□□□□□ -0.27
MSLN-202ENST00000545450 SMCR5Q8TEV8 140 aa13.35□□□□□ -0.27
MSLN-202ENST00000545450 PPDPFQ9H3Y8 114 aa13.35□□□□□ -0.27
MSLN-202ENST00000545450 DAZ2Q13117 558 aaKnown RBP13.35□□□□□ -0.27
MSLN-202ENST00000545450 DAZ4Q86SG3 579 aaKnown RBP13.35□□□□□ -0.27
MSLN-202ENST00000545450 LINC00643Q86TS7 51 aa13.35□□□□□ -0.27
MSLN-202ENST00000545450 STHQ8IWL8 128 aa13.35□□□□□ -0.27
MSLN-202ENST00000545450 DAZ3Q9NR90 486 aaKnown RBP13.35□□□□□ -0.27
MSLN-202ENST00000545450 INSP01308 110 aa13.34□□□□□ -0.27
MSLN-202ENST00000545450 PRIMA1Q86XR5 153 aa13.34□□□□□ -0.27
MSLN-202ENST00000545450 SPATA3Q8NHX4 192 aa13.34□□□□□ -0.27
MSLN-202ENST00000545450 WFDC10AQ9H1F0 79 aa13.34□□□□□ -0.27
MSLN-202ENST00000545450 C22orf24Q9Y442 160 aa13.34□□□□□ -0.27
MSLN-202ENST00000545450 SMIM20Q8N5G0 67 aa13.34□□□□□ -0.27
MSLN-202ENST00000545450 F5H768 121 aa13.33□□□□□ -0.28
MSLN-202ENST00000545450 BAALC-AS2P0C853 105 aa13.33□□□□□ -0.28
MSLN-202ENST00000545450 C19orf73Q9NVV2 129 aa13.33□□□□□ -0.28
MSLN-202ENST00000545450 FAM236AA0A1B0GUQ0 79 aa13.32□□□□□ -0.28
MSLN-202ENST00000545450 FAM236BA0A1B0GV22 79 aa13.32□□□□□ -0.28
MSLN-202ENST00000545450 HERV-K104P63124 156 aa13.32□□□□□ -0.28
MSLN-202ENST00000545450 TRAV13-1A0A0B4J241 112 aa13.32□□□□□ -0.28
MSLN-202ENST00000545450 NOTCH3Q9UM47 2321 aa13.32□□□□□ -0.28
MSLN-202ENST00000545450 TRRAPQ9Y4A5 3859 aa13.31□□□□□ -0.28
MSLN-202ENST00000545450 FAM222AQ5U5X8 452 aa13.31□□□□□ -0.28
MSLN-202ENST00000545450 NTM-AS1Q6ZSK4 140 aa13.31□□□□□ -0.28
MSLN-202ENST00000545450 FAM218AQ96MZ4 157 aa13.31□□□□□ -0.28
MSLN-202ENST00000545450 XCL2Q9UBD3 114 aa13.31□□□□□ -0.28
MSLN-202ENST00000545450 TMEM126AQ9H061 195 aa13.3□□□□□ -0.28
MSLN-202ENST00000545450 CDC42SE2Q9NRR3 84 aa13.3□□□□□ -0.28
MSLN-202ENST00000545450 CMC4P56277 68 aaPredicted RBP13.29□□□□□ -0.28
MSLN-202ENST00000545450 IL17DQ8TAD2 202 aa13.29□□□□□ -0.28
MSLN-202ENST00000545450 TRBV10-1A0A0K0K1A3 114 aa13.28□□□□□ -0.28
MSLN-202ENST00000545450 RPL36AP83881 106 aaKnown RBP13.28□□□□□ -0.28
MSLN-202ENST00000545450 RPL36ALQ969Q0 106 aaKnown RBP13.28□□□□□ -0.28
MSLN-202ENST00000545450 K7EQD1 137 aa13.27□□□□□ -0.29
MSLN-202ENST00000545450 RPL28P46779 137 aaKnown RBP13.27□□□□□ -0.29
MSLN-202ENST00000545450 C1orf158Q8N1D5 194 aa13.27□□□□□ -0.29
MSLN-202ENST00000545450 TRGV1A0A0A0MS02 117 aa13.26□□□□□ -0.29
MSLN-202ENST00000545450 TRAV13-2A0A0B4J235 113 aa13.25□□□□□ -0.29
MSLN-202ENST00000545450 GIG44P09565 113 aaPredicted RBP13.25□□□□□ -0.29
MSLN-202ENST00000545450 INAFM2P0DMQ5 153 aa13.25□□□□□ -0.29
MSLN-202ENST00000545450 C5orf38Q86SI9 138 aa13.25□□□□□ -0.29
MSLN-202ENST00000545450 CXCL5P42830 114 aa13.25□□□□□ -0.29
MSLN-202ENST00000545450 ATP5G1P05496 136 aa13.24□□□□□ -0.29
MSLN-202ENST00000545450 RPL35AP18077 110 aaKnown RBP13.24□□□□□ -0.29
MSLN-202ENST00000545450 C3orf56Q8N813 242 aa13.23□□□□□ -0.29
MSLN-202ENST00000545450 MALP21145 153 aa13.22□□□□□ -0.29
MSLN-202ENST00000545450 C9orf66Q5T8R8 295 aa13.22□□□□□ -0.29
MSLN-202ENST00000545450 C3orf22Q8N5N4 141 aa13.22□□□□□ -0.29
MSLN-202ENST00000545450 FBN1P35555 2871 aaKnown RBP13.22□□□□□ -0.29
MSLN-202ENST00000545450 KRTAP24-1Q3LI83 254 aa13.22□□□□□ -0.29
MSLN-202ENST00000545450 Q9HAA7 133 aa13.22□□□□□ -0.29
MSLN-202ENST00000545450 Q6ZTI0 123 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms