RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 DEFB131AP59861 70 aa9.08□□□□□ -0.96
SMG8-202ENST00000543872 CRYBG3Q68DQ2 2970 aa9.07□□□□□ -0.96
SMG8-202ENST00000543872 WNK1Q9H4A3 2382 aa9.07□□□□□ -0.96
SMG8-202ENST00000543872 IGHV3-53P01767 116 aa9.07□□□□□ -0.96
SMG8-202ENST00000543872 RNASE1P07998 156 aaKnown RBP9.07□□□□□ -0.96
SMG8-202ENST00000543872 C1orf195Q5TG92 126 aa9.06□□□□□ -0.96
SMG8-202ENST00000543872 FAM19A1Q7Z5A9 133 aa9.06□□□□□ -0.96
SMG8-202ENST00000543872 BRK1Q8WUW1 75 aa9.06□□□□□ -0.96
SMG8-202ENST00000543872 IGKV2-28A0A075B6P5 120 aa9.06□□□□□ -0.96
SMG8-202ENST00000543872 IGKV2D-28P01615 120 aa9.06□□□□□ -0.96
SMG8-202ENST00000543872 IGF2RP11717 2491 aa9.06□□□□□ -0.96
SMG8-202ENST00000543872 ABCA2Q9BZC7 2435 aa9.06□□□□□ -0.96
SMG8-202ENST00000543872 PAX4O43316 350 aa9.05□□□□□ -0.96
SMG8-202ENST00000543872 Q96MF0 132 aa9.05□□□□□ -0.96
SMG8-202ENST00000543872 HIVEP3Q5T1R4 2406 aa9.05□□□□□ -0.96
SMG8-202ENST00000543872 H3BUA1 57 aa9.05□□□□□ -0.96
SMG8-202ENST00000543872 ENHOQ6UWT2 76 aa9.04□□□□□ -0.96
SMG8-202ENST00000543872 RBMY1BA6NDE4 496 aaKnown RBP9.04□□□□□ -0.96
SMG8-202ENST00000543872 RBMY1EA6NEQ0 496 aaKnown RBP9.04□□□□□ -0.96
SMG8-202ENST00000543872 IGLV1-40P01703 118 aa9.04□□□□□ -0.96
SMG8-202ENST00000543872 RBMY1DP0C7P1 496 aaKnown RBP9.04□□□□□ -0.96
SMG8-202ENST00000543872 NDUFC2O95298 119 aa9.03□□□□□ -0.96
SMG8-202ENST00000543872 C11orf68Q9H3H3 251 aaKnown RBP9.03□□□□□ -0.96
SMG8-202ENST00000543872 C16orf95Q9H693 158 aa9.03□□□□□ -0.96
SMG8-202ENST00000543872 OVOL2Q9BRP0 275 aa9.03□□□□□ -0.96
SMG8-202ENST00000543872 PF4P02776 101 aa9.03□□□□□ -0.96
SMG8-202ENST00000543872 FP248Q71RG6 208 aaPredicted RBP9.03□□□□□ -0.96
SMG8-202ENST00000543872 ADORA2A-AS1P86434 159 aa9.02□□□□□ -0.97
SMG8-202ENST00000543872 SERP1Q9Y6X1 66 aa9.02□□□□□ -0.97
SMG8-202ENST00000543872 MYO9AB2RTY4 2548 aa9.02□□□□□ -0.97
SMG8-202ENST00000543872 H0YGX0 51 aa9.02□□□□□ -0.97
SMG8-202ENST00000543872 FBXL19-AS1Q494R0 122 aa9.02□□□□□ -0.97
SMG8-202ENST00000543872 CCL18P55774 89 aa9.01□□□□□ -0.97
SMG8-202ENST00000543872 A6NDX4 124 aa9.01□□□□□ -0.97
SMG8-202ENST00000543872 TRGV1A0A0A0MS02 117 aa9□□□□□ -0.97
SMG8-202ENST00000543872 NDUFC2-KCTD14E9PQ53 114 aa9□□□□□ -0.97
SMG8-202ENST00000543872 COX7B2Q8TF08 81 aa9□□□□□ -0.97
SMG8-202ENST00000543872 ORMDL1Q9P0S3 153 aa9□□□□□ -0.97
SMG8-202ENST00000543872 LINC00474Q9P2X8 69 aa9□□□□□ -0.97
SMG8-202ENST00000543872 USP9YO00507 2555 aaPredicted RBP9□□□□□ -0.97
SMG8-202ENST00000543872 PSMB8P28062 276 aa9□□□□□ -0.97
SMG8-202ENST00000543872 XCL1P47992 114 aa9□□□□□ -0.97
SMG8-202ENST00000543872 XCL2Q9UBD3 114 aa9□□□□□ -0.97
SMG8-202ENST00000543872 UBE2L6O14933 153 aa8.99□□□□□ -0.97
SMG8-202ENST00000543872 NTM-AS1Q6ZSK4 140 aa8.99□□□□□ -0.97
SMG8-202ENST00000543872 UBE2E2Q96LR5 201 aa8.99□□□□□ -0.97
SMG8-202ENST00000543872 CDC42SE2Q9NRR3 84 aa8.99□□□□□ -0.97
SMG8-202ENST00000543872 EPM2AB3EWF7 344 aa8.99□□□□□ -0.97
SMG8-202ENST00000543872 CCKP06307 115 aa8.99□□□□□ -0.97
SMG8-202ENST00000543872 JMJD1CQ15652 2540 aa8.98□□□□□ -0.97
SMG8-202ENST00000543872 PIEZO1Q92508 2521 aa8.98□□□□□ -0.97
SMG8-202ENST00000543872 LINC00482Q8N8I6 264 aa8.97□□□□□ -0.97
SMG8-202ENST00000543872 OBSCN-AS1Q96MR7 158 aa8.97□□□□□ -0.97
SMG8-202ENST00000543872 IGHV4-61A0A0C4DH41 118 aa8.97□□□□□ -0.97
SMG8-202ENST00000543872 KHDC1LQ5JSQ8 128 aa8.97□□□□□ -0.97
SMG8-202ENST00000543872 IL17DQ8TAD2 202 aa8.97□□□□□ -0.97
SMG8-202ENST00000543872 DEFB136Q30KP8 78 aa8.97□□□□□ -0.97
SMG8-202ENST00000543872 SNURFQ9Y675 71 aa8.97□□□□□ -0.97
SMG8-202ENST00000543872 H7BZZ5 65 aa8.96□□□□□ -0.97
SMG8-202ENST00000543872 LYPD5Q6UWN5 251 aa8.96□□□□□ -0.98
SMG8-202ENST00000543872 VPS13CQ709C8 3753 aa8.96□□□□□ -0.98
SMG8-202ENST00000543872 SS18Q15532 418 aa8.96□□□□□ -0.98
SMG8-202ENST00000543872 S100A7L2Q5SY68 101 aa8.96□□□□□ -0.98
SMG8-202ENST00000543872 SETD2Q9BYW2 2564 aaPredicted RBP8.95□□□□□ -0.98
SMG8-202ENST00000543872 SMIM26A0A096LP01 95 aa8.95□□□□□ -0.98
SMG8-202ENST00000543872 PRR3P79522 188 aaKnown RBP8.95□□□□□ -0.98
SMG8-202ENST00000543872 C11orf72Q8NBR9 251 aa8.95□□□□□ -0.98
SMG8-202ENST00000543872 CSMD2Q7Z408 3487 aa8.95□□□□□ -0.98
SMG8-202ENST00000543872 Q6ZTI0 123 aa8.95□□□□□ -0.98
SMG8-202ENST00000543872 TLN2Q9Y4G6 2542 aa8.95□□□□□ -0.98
SMG8-202ENST00000543872 IGHV4-59P01825 116 aa8.94□□□□□ -0.98
SMG8-202ENST00000543872 UBL5Q9BZL1 73 aa8.94□□□□□ -0.98
SMG8-202ENST00000543872 SLURP1P55000 103 aa8.94□□□□□ -0.98
SMG8-202ENST00000543872 USP9XQ93008 2570 aaPredicted RBP8.93□□□□□ -0.98
SMG8-202ENST00000543872 NBL1P41271 181 aa8.93□□□□□ -0.98
SMG8-202ENST00000543872 HAMPP81172 84 aa8.93□□□□□ -0.98
SMG8-202ENST00000543872 PTPN13Q12923 2485 aa8.92□□□□□ -0.98
SMG8-202ENST00000543872 TMEM89A2RUT3 159 aa8.92□□□□□ -0.98
SMG8-202ENST00000543872 RBM3P98179 157 aaKnown RBP8.92□□□□□ -0.98
SMG8-202ENST00000543872 C6orf226Q5I0X4 101 aa8.92□□□□□ -0.98
SMG8-202ENST00000543872 LOC100131303A0A0U1RQF7 123 aa8.91□□□□□ -0.98
SMG8-202ENST00000543872 K7EQD1 137 aa8.91□□□□□ -0.98
SMG8-202ENST00000543872 INSP01308 110 aa8.91□□□□□ -0.98
SMG8-202ENST00000543872 C18orf65Q6ZTR6 163 aa8.91□□□□□ -0.98
SMG8-202ENST00000543872 RMI2Q96E14 147 aa8.91□□□□□ -0.98
SMG8-202ENST00000543872 SONP18583 2426 aaKnown RBP8.91□□□□□ -0.98
SMG8-202ENST00000543872 FN1P02751 2386 aaKnown RBP8.91□□□□□ -0.98
SMG8-202ENST00000543872 JMJD7-PLA2G4BH0Y9G9 81 aa8.9□□□□□ -0.98
SMG8-202ENST00000543872 FAM19A3Q7Z5A8 133 aa8.9□□□□□ -0.99
SMG8-202ENST00000543872 MPLKIPQ8TAP9 179 aa8.9□□□□□ -0.99
SMG8-202ENST00000543872 SPTBN4Q9H254 2564 aa8.9□□□□□ -0.99
SMG8-202ENST00000543872 TRBV6-4A0A1B0GX49 114 aa8.89□□□□□ -0.99
SMG8-202ENST00000543872 F8WEM9 126 aa8.89□□□□□ -0.99
SMG8-202ENST00000543872 NCOR2Q9Y618 2525 aa8.89□□□□□ -0.99
SMG8-202ENST00000543872 IGLV4-60A0A075B6I1 120 aa8.89□□□□□ -0.99
SMG8-202ENST00000543872 TRBV7-6A0A0J9YX20 115 aa8.89□□□□□ -0.99
SMG8-202ENST00000543872 CELSR2Q9HCU4 2923 aa8.89□□□□□ -0.99
SMG8-202ENST00000543872 TRAV10A0A0B4J240 114 aa8.88□□□□□ -0.99
SMG8-202ENST00000543872 IBA57-AS1B1ANH7 110 aa8.88□□□□□ -0.99
SMG8-202ENST00000543872 ATP5EP2Q5VTU8 51 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms