RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 SDIM1Q6ZPB5 146 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 FA2HQ7L5A8 372 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 TMEM141Q96I45 108 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 C2orf88Q9BSF0 95 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 ALKBH7Q9BT30 221 aaPredicted RBP7.11□□□□□ -1.27
DDB1-222ENST00000543627 VCX2Q9H322 139 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 SMCO4Q9NRQ5 59 aa7.11□□□□□ -1.27
DDB1-222ENST00000543627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.11□□□□□ -1.27
DDB1-222ENST00000543627 DNAH8Q96JB1 4490 aa7.1□□□□□ -1.27
DDB1-222ENST00000543627 IGLV4-69A0A075B6H9 119 aa7.1□□□□□ -1.27
DDB1-222ENST00000543627 GVQW2A0A096LPI5 108 aaPredicted RBP7.1□□□□□ -1.27
DDB1-222ENST00000543627 PANO1I0J062 215 aa7.1□□□□□ -1.27
DDB1-222ENST00000543627 MT-ND6P03923 174 aa7.1□□□□□ -1.27
DDB1-222ENST00000543627 FAM104AQ969W3 186 aa7.1□□□□□ -1.27
DDB1-222ENST00000543627 FAT1Q14517 4588 aa7.09□□□□□ -1.27
DDB1-222ENST00000543627 G0S2P27469 103 aa7.09□□□□□ -1.27
DDB1-222ENST00000543627 SYCNQ0VAF6 134 aa7.09□□□□□ -1.27
DDB1-222ENST00000543627 MAJINQ3KP22 176 aa7.09□□□□□ -1.27
DDB1-222ENST00000543627 ORAOV1Q8WV07 137 aa7.09□□□□□ -1.27
DDB1-222ENST00000543627 CARD19Q96LW7 228 aa7.09□□□□□ -1.27
DDB1-222ENST00000543627 SCGB3A1Q96QR1 104 aa7.09□□□□□ -1.27
DDB1-222ENST00000543627 CAMK2N2Q96S95 79 aa7.09□□□□□ -1.27
DDB1-222ENST00000543627 PYGO1Q9Y3Y4 419 aa7.09□□□□□ -1.27
DDB1-222ENST00000543627 K7EMI3 77 aa7.08□□□□□ -1.28
DDB1-222ENST00000543627 PLA2G1BP04054 148 aaKnown RBP7.08□□□□□ -1.28
DDB1-222ENST00000543627 SPAG11BQ08648 103 aa7.08□□□□□ -1.28
DDB1-222ENST00000543627 GAGE2BQ13066 116 aa7.07□□□□□ -1.28
DDB1-222ENST00000543627 Q6ZRU5 148 aa7.07□□□□□ -1.28
DDB1-222ENST00000543627 ABCA13Q86UQ4 5058 aa7.07□□□□□ -1.28
DDB1-222ENST00000543627 IGHV3OR16-9A0A0B4J2B5 98 aa7.06□□□□□ -1.28
DDB1-222ENST00000543627 A0A0J9YXV3 536 aa7.06□□□□□ -1.28
DDB1-222ENST00000543627 IGIPA6NJ69 53 aa7.06□□□□□ -1.28
DDB1-222ENST00000543627 UBE2D1P51668 147 aa7.06□□□□□ -1.28
DDB1-222ENST00000543627 NDUFA6P56556 154 aa7.06□□□□□ -1.28
DDB1-222ENST00000543627 LINC00242Q5T6M2 205 aa7.06□□□□□ -1.28
DDB1-222ENST00000543627 SVIPQ8NHG7 77 aa7.06□□□□□ -1.28
DDB1-222ENST00000543627 TOMM6Q96B49 74 aa7.06□□□□□ -1.28
DDB1-222ENST00000543627 A0A087WYN8 130 aa7.05□□□□□ -1.28
DDB1-222ENST00000543627 A0A096LNI7 61 aa7.05□□□□□ -1.28
DDB1-222ENST00000543627 PAPPA-AS1Q5QFB9 102 aa7.05□□□□□ -1.28
DDB1-222ENST00000543627 CBLN2Q8IUK8 224 aa7.05□□□□□ -1.28
DDB1-222ENST00000543627 STPG4Q8N801 248 aa7.05□□□□□ -1.28
DDB1-222ENST00000543627 TOMM7Q9P0U1 55 aa7.05□□□□□ -1.28
DDB1-222ENST00000543627 RPL37AP61513 92 aaKnown RBP7.04□□□□□ -1.28
DDB1-222ENST00000543627 RPL18AQ02543 176 aaKnown RBP7.04□□□□□ -1.28
DDB1-222ENST00000543627 PMCHL1Q16048 86 aa7.04□□□□□ -1.28
DDB1-222ENST00000543627 LINC00173Q6ZV60 143 aa7.04□□□□□ -1.28
DDB1-222ENST00000543627 ERASQ7Z444 233 aa7.04□□□□□ -1.28
DDB1-222ENST00000543627 OR10D4PQ8NGN7 298 aa7.04□□□□□ -1.28
DDB1-222ENST00000543627 AMELXQ99217 191 aa7.04□□□□□ -1.28
DDB1-222ENST00000543627 GEMIN7Q9H840 131 aaKnown RBP7.04□□□□□ -1.28
DDB1-222ENST00000543627 PRSS2P07478 247 aa7.03□□□□□ -1.28
DDB1-222ENST00000543627 LINC00614P0C842 121 aa7.03□□□□□ -1.28
DDB1-222ENST00000543627 C18orf32Q8TCD1 76 aa7.03□□□□□ -1.28
DDB1-222ENST00000543627 SPACA4Q8TDM5 124 aa7.03□□□□□ -1.28
DDB1-222ENST00000543627 C2orf48Q96LS8 159 aa7.03□□□□□ -1.28
DDB1-222ENST00000543627 PACRGQ96M98 296 aaPredicted RBP7.03□□□□□ -1.28
DDB1-222ENST00000543627 TIMM17AQ99595 171 aa7.03□□□□□ -1.28
DDB1-222ENST00000543627 A0A087WZ39 114 aa7.02□□□□□ -1.29
DDB1-222ENST00000543627 LOC107984640A0A0U1RRK4 108 aa7.02□□□□□ -1.29
DDB1-222ENST00000543627 NDUFA1O15239 70 aa7.02□□□□□ -1.29
DDB1-222ENST00000543627 UNQ6190/PRO20217Q6UXQ8 127 aa7.02□□□□□ -1.29
DDB1-222ENST00000543627 PKIGQ9Y2B9 76 aa7.02□□□□□ -1.29
DDB1-222ENST00000543627 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.01□□□□□ -1.29
DDB1-222ENST00000543627 NPSP0C0P6 89 aa7.01□□□□□ -1.29
DDB1-222ENST00000543627 RAB5BP61020 215 aa7.01□□□□□ -1.29
DDB1-222ENST00000543627 SEC11AP67812 179 aa7.01□□□□□ -1.29
DDB1-222ENST00000543627 C6orf226Q5I0X4 101 aa7.01□□□□□ -1.29
DDB1-222ENST00000543627 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
DDB1-222ENST00000543627 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
DDB1-222ENST00000543627 LINC00469Q8N7U9 141 aa7.01□□□□□ -1.29
DDB1-222ENST00000543627 SRRM2Q9UQ35 2752 aaKnown RBP7.01□□□□□ -1.29
DDB1-222ENST00000543627 LINC01546A6NGU7 62 aa7□□□□□ -1.29
DDB1-222ENST00000543627 LINC01549A6NIU2 74 aa7□□□□□ -1.29
DDB1-222ENST00000543627 CKS1BP61024 79 aa7□□□□□ -1.29
DDB1-222ENST00000543627 HERVK_113P63121 156 aa7□□□□□ -1.29
DDB1-222ENST00000543627 C7orf33Q8WU49 177 aa7□□□□□ -1.29
DDB1-222ENST00000543627 URB1-AS1Q96HZ7 61 aa7□□□□□ -1.29
DDB1-222ENST00000543627 CST9LQ9H4G1 147 aa7□□□□□ -1.29
DDB1-222ENST00000543627 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
DDB1-222ENST00000543627 CDKN2A-AS1Q9UH64 79 aa7□□□□□ -1.29
DDB1-222ENST00000543627 HBDP02042 147 aa6.99□□□□□ -1.29
DDB1-222ENST00000543627 PTTG1IPP53801 180 aa6.99□□□□□ -1.29
DDB1-222ENST00000543627 CIRBPQ14011 172 aaKnown RBP6.99□□□□□ -1.29
DDB1-222ENST00000543627 PMVKQ15126 192 aa6.99□□□□□ -1.29
DDB1-222ENST00000543627 GAGE2EQ4V326 116 aa6.99□□□□□ -1.29
DDB1-222ENST00000543627 BAGE3Q86Y29 109 aa6.99□□□□□ -1.29
DDB1-222ENST00000543627 YPEL4Q96NS1 127 aa6.99□□□□□ -1.29
DDB1-222ENST00000543627 GAGE2DQ9UEU5 116 aa6.99□□□□□ -1.29
DDB1-222ENST00000543627 TRGC2P03986 189 aa6.98□□□□□ -1.29
DDB1-222ENST00000543627 MRPL35Q9NZE8 188 aaKnown RBP6.98□□□□□ -1.29
DDB1-222ENST00000543627 PLAC8Q9NZF1 115 aa6.98□□□□□ -1.29
DDB1-222ENST00000543627 C6orf48Q9UBA6 75 aa6.98□□□□□ -1.29
DDB1-222ENST00000543627 VPS13BQ7Z7G8 4022 aa6.98□□□□□ -1.29
DDB1-222ENST00000543627 SPINK8P0C7L1 97 aa6.97□□□□□ -1.29
DDB1-222ENST00000543627 KIAA0087Q14695 138 aa6.97□□□□□ -1.29
DDB1-222ENST00000543627 C9orf116Q5BN46 136 aaPredicted RBP6.97□□□□□ -1.29
DDB1-222ENST00000543627 A0A096LNJ9 63 aa6.96□□□□□ -1.3
DDB1-222ENST00000543627 TINCRA0A1B0GVN0 87 aa6.96□□□□□ -1.3
DDB1-222ENST00000543627 A0A1W2PNN7 141 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms