RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 SLC38A11Q08AI6 406 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 KLKP1Q107X0 134 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 KIAA0087Q14695 138 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 KRTAP19-7Q3SYF9 63 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 SMUG1Q53HV7 270 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 Q5W150 140 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 GOLT1AQ6ZVE7 132 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 PRR15Q8IV56 129 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 CMTM2Q8TAZ6 248 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 FAM104AQ969W3 186 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 ZNF625Q96I27 306 aaPredicted RBP0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 HYLS1Q96M11 299 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 CIB3Q96Q77 187 aaPredicted RBP0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 SAR1AQ9NR31 198 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 CRIPTQ9P021 101 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 COPZ2Q9P299 210 aa0.71□□□□□ -2.3
TRAV1-1-201ENST00000542354 HMGB1P1B2RPK0 211 aaPredicted RBP0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 MED6O75586 246 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 SCO1O75880 301 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 APCSP02743 223 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 IAPPP10997 89 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 POLR2IP36954 125 aaKnown RBP0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 TMBIM6P55061 237 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 TAS2R46P59540 309 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 CKS1BP61024 79 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 HERVK_113P61574 105 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 SMCO1Q147U7 214 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 LRRC37A5PQ49AS3 106 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 H1FX-AS1Q4G0G2 97 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 FAM74A1Q5RGS3 127 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 RASL11AQ6T310 242 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 LCA10Q71F78 164 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 AP3S1Q92572 193 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 SIKE1Q9BRV8 207 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 ZNF471Q9BX82 626 aaPredicted RBP0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 NIT2Q9NQR4 276 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 DHRS4-AS1Q9P1J3 65 aa0.7□□□□□ -2.3
TRAV1-1-201ENST00000542354 GRIFINA4D1Z8 144 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 SERF1AO75920 110 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 UCHL1P09936 223 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 PDE6GP18545 87 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 RCVRNP35243 200 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 AP3S2P59780 193 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 DNAL1Q4LDG9 190 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 RNASE13Q5GAN3 156 aaKnown RBP0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 SPANXN5Q5MJ07 72 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 SAPCD1Q5SSQ6 148 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 SEC22CQ9BRL7 303 aa0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 STRAPQ9Y3F4 350 aaKnown RBP0.69□□□□□ -2.3
TRAV1-1-201ENST00000542354 TRAV9-1A0A075B6T8 112 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 TRAV18A0A075B6X5 111 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 IRGMA1A4Y4 181 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 IFITM5A6NNB3 132 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 KRBOX1C9JBD0 128 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 CAMLGP49069 296 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 RRAS2P62070 204 aaPredicted RBP0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 SMAGPQ0VAQ4 97 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 C6orf226Q5I0X4 101 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 SPANXN1Q5VSR9 72 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 SLC25A34Q6PIV7 304 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 Q6ZVQ6 151 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 MRPL52Q86TS9 123 aaKnown RBP0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 SAMD12Q8N8I0 201 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 GATD1Q8NB37 220 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 GLYATL2Q8WU03 294 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 MRAP2Q96G30 205 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 TIMM21Q9BVV7 248 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 GABARAPL3Q9BY60 117 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 PRO1933Q9H354 126 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 CCDC59Q9P031 241 aaKnown RBP0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 WDR83OSQ9Y284 106 aa0.68□□□□□ -2.3
TRAV1-1-201ENST00000542354 ETDCA0A1B0GVM5 59 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 SERTM2A0A1B0GWG4 89 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 PDCD5O14737 125 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 IGKV4-1P06312 121 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 MGPP08493 103 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 SLC25A6P12236 298 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 NDUFA6P56556 154 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 SPINK7P58062 85 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 IL18Q14116 193 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 MIC13Q5XKP0 118 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 ALKAL2Q6UX46 152 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 SPATA24Q86W54 205 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 WFDC13Q8IUB5 93 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 FXYD5Q96DB9 178 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 AP1S3Q96PC3 154 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 MGST2Q99735 147 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 SLC25A2Q9BXI2 301 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 VCXQ9H320 206 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 OTORQ9NRC9 128 aa0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 TXNL4BQ9NX01 149 aaKnown RBP0.67□□□□□ -2.3
TRAV1-1-201ENST00000542354 TMSB15BA0A087X1C1 80 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 TGIF2-C20orf24A0A0A6YYL0 155 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 EFCAB10A6NFE3 127 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 F8VRH5 84 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 H3BP45 60 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 SNAI2O43623 268 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 SYNGR2O43760 224 aa0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 ZNF73O43830 326 aaPredicted RBP0.66□□□□□ -2.3
TRAV1-1-201ENST00000542354 OR7C2O60412 319 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms