RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 LINC00694P0DN24 101 aa11.72□□□□□ -0.53
VARS2-212ENST00000542001 ZNF561-AS1K7EIQ3 104 aa11.72□□□□□ -0.53
VARS2-212ENST00000542001 C9orf153Q5TBE3 101 aa11.72□□□□□ -0.53
VARS2-212ENST00000542001 FAM222AQ5U5X8 452 aa11.72□□□□□ -0.53
VARS2-212ENST00000542001 IGKV3D-7A0A0C4DH55 119 aa11.71□□□□□ -0.53
VARS2-212ENST00000542001 RNF152Q8N8N0 203 aa11.71□□□□□ -0.53
VARS2-212ENST00000542001 TRAV13-2A0A0B4J235 113 aa11.71□□□□□ -0.54
VARS2-212ENST00000542001 SLPIP03973 132 aa11.71□□□□□ -0.54
VARS2-212ENST00000542001 HERV-K104P63124 156 aa11.7□□□□□ -0.54
VARS2-212ENST00000542001 LINC00269Q8N2A0 174 aa11.7□□□□□ -0.54
VARS2-212ENST00000542001 UBE2D4Q9Y2X8 147 aa11.7□□□□□ -0.54
VARS2-212ENST00000542001 HAMPP81172 84 aa11.69□□□□□ -0.54
VARS2-212ENST00000542001 ADAMTSL4-AS1Q5T5F5 129 aa11.69□□□□□ -0.54
VARS2-212ENST00000542001 KIF25-AS1Q9Y6Z4 181 aa11.69□□□□□ -0.54
VARS2-212ENST00000542001 UTP20O75691 2785 aaKnown RBP11.68□□□□□ -0.54
VARS2-212ENST00000542001 TRBV10-2A0A0K0K1G8 114 aa11.68□□□□□ -0.54
VARS2-212ENST00000542001 NCR3O14931 201 aa11.68□□□□□ -0.54
VARS2-212ENST00000542001 COX6A2Q02221 97 aa11.68□□□□□ -0.54
VARS2-212ENST00000542001 LINC00308Q8TCZ7 52 aa11.68□□□□□ -0.54
VARS2-212ENST00000542001 NBEAL1Q6ZS30 2694 aa11.67□□□□□ -0.54
VARS2-212ENST00000542001 LINC00315P59091 139 aa11.67□□□□□ -0.54
VARS2-212ENST00000542001 FAM110AQ9BQ89 295 aa11.67□□□□□ -0.54
VARS2-212ENST00000542001 APOC4P55056 127 aa11.67□□□□□ -0.54
VARS2-212ENST00000542001 TRAV25A0A0B4J276 109 aa11.67□□□□□ -0.54
VARS2-212ENST00000542001 XGP55808 180 aa11.67□□□□□ -0.54
VARS2-212ENST00000542001 IGKV2D-24A0A075B6R9 120 aa11.66□□□□□ -0.54
VARS2-212ENST00000542001 MRPL23Q16540 153 aaKnown RBP11.66□□□□□ -0.54
VARS2-212ENST00000542001 TRBV10-1A0A0K0K1A3 114 aa11.66□□□□□ -0.54
VARS2-212ENST00000542001 C1orf158Q8N1D5 194 aa11.66□□□□□ -0.54
VARS2-212ENST00000542001 NOTCH1P46531 2555 aa11.66□□□□□ -0.54
VARS2-212ENST00000542001 COX7A2LO14548 114 aa11.65□□□□□ -0.54
VARS2-212ENST00000542001 INAFM2P0DMQ5 153 aa11.65□□□□□ -0.55
VARS2-212ENST00000542001 C14orf132Q9NPU4 83 aa11.64□□□□□ -0.55
VARS2-212ENST00000542001 DCHS2Q6V1P9 2916 aa11.64□□□□□ -0.55
VARS2-212ENST00000542001 PRO0255Q9UI72 69 aa11.64□□□□□ -0.55
VARS2-212ENST00000542001 A0A0B4J2C4 111 aa11.63□□□□□ -0.55
VARS2-212ENST00000542001 UBE2D1P51668 147 aa11.63□□□□□ -0.55
VARS2-212ENST00000542001 LINC00242Q5T6M2 205 aa11.63□□□□□ -0.55
VARS2-212ENST00000542001 HIGD2BQ4VC39 106 aa11.63□□□□□ -0.55
VARS2-212ENST00000542001 DEFB105AQ8NG35 78 aa11.63□□□□□ -0.55
VARS2-212ENST00000542001 NF1P21359 2839 aa11.62□□□□□ -0.55
VARS2-212ENST00000542001 SMG1Q96Q15 3661 aaKnown RBP11.62□□□□□ -0.55
VARS2-212ENST00000542001 FAM236AA0A1B0GUQ0 79 aa11.62□□□□□ -0.55
VARS2-212ENST00000542001 FAM236BA0A1B0GV22 79 aa11.62□□□□□ -0.55
VARS2-212ENST00000542001 SPART-AS1P0CW21 52 aa11.61□□□□□ -0.55
VARS2-212ENST00000542001 CHCHD7Q9BUK0 85 aa11.61□□□□□ -0.55
VARS2-212ENST00000542001 XAGE1AQ9HD64 81 aa11.61□□□□□ -0.55
VARS2-212ENST00000542001 PYGO1Q9Y3Y4 419 aa11.61□□□□□ -0.55
VARS2-212ENST00000542001 TRBV6-8A0A0A6YYG3 113 aa11.6□□□□□ -0.55
VARS2-212ENST00000542001 C9orf66Q5T8R8 295 aa11.6□□□□□ -0.55
VARS2-212ENST00000542001 MRPS36P82909 103 aaKnown RBP11.6□□□□□ -0.55
VARS2-212ENST00000542001 RPL32P62910 135 aaKnown RBP11.6□□□□□ -0.55
VARS2-212ENST00000542001 IGLV4-60A0A075B6I1 120 aa11.6□□□□□ -0.55
VARS2-212ENST00000542001 SPAG11BQ08648 103 aa11.59□□□□□ -0.55
VARS2-212ENST00000542001 RPL18AQ02543 176 aaKnown RBP11.59□□□□□ -0.55
VARS2-212ENST00000542001 PRR3P79522 188 aaKnown RBP11.58□□□□□ -0.56
VARS2-212ENST00000542001 CAMK2N2Q96S95 79 aa11.58□□□□□ -0.56
VARS2-212ENST00000542001 NDUFA1O15239 70 aa11.57□□□□□ -0.56
VARS2-212ENST00000542001 LY6G6DO95868 133 aa11.57□□□□□ -0.56
VARS2-212ENST00000542001 PRB2P02812 416 aaPredicted RBP11.57□□□□□ -0.56
VARS2-212ENST00000542001 SPATA25Q9BR10 227 aa11.57□□□□□ -0.56
VARS2-212ENST00000542001 SETXQ7Z333 2677 aaKnown RBP11.57□□□□□ -0.56
VARS2-212ENST00000542001 NDUFV3P56181 108 aaKnown RBP11.56□□□□□ -0.56
VARS2-212ENST00000542001 ORMDL1Q9P0S3 153 aa11.56□□□□□ -0.56
VARS2-212ENST00000542001 UNC79Q9P2D8 2635 aa11.56□□□□□ -0.56
VARS2-212ENST00000542001 LRRC75A-AS1Q8N1F1 130 aa11.56□□□□□ -0.56
VARS2-212ENST00000542001 H3BT86 120 aa11.56□□□□□ -0.56
VARS2-212ENST00000542001 CCDC179H3BU77 68 aa11.56□□□□□ -0.56
VARS2-212ENST00000542001 CDC42SE2Q9NRR3 84 aa11.56□□□□□ -0.56
VARS2-212ENST00000542001 FBN2P35556 2912 aa11.56□□□□□ -0.56
VARS2-212ENST00000542001 ITPR2Q14571 2701 aa11.56□□□□□ -0.56
VARS2-212ENST00000542001 REG3AQ06141 175 aa11.55□□□□□ -0.56
VARS2-212ENST00000542001 C9orf116Q5BN46 136 aaPredicted RBP11.55□□□□□ -0.56
VARS2-212ENST00000542001 CHCHD10Q8WYQ3 142 aaPredicted RBP11.55□□□□□ -0.56
VARS2-212ENST00000542001 OVOL2Q9BRP0 275 aa11.55□□□□□ -0.56
VARS2-212ENST00000542001 PSCAO43653 123 aa11.55□□□□□ -0.56
VARS2-212ENST00000542001 CSMD1Q96PZ7 3565 aa11.55□□□□□ -0.56
VARS2-212ENST00000542001 TIRAPP58753 221 aa11.55□□□□□ -0.56
VARS2-212ENST00000542001 SPANXCQ9NY87 97 aa11.54□□□□□ -0.56
VARS2-212ENST00000542001 UBE2D3P61077 147 aa11.54□□□□□ -0.56
VARS2-212ENST00000542001 UBE2D2P62837 147 aa11.54□□□□□ -0.56
VARS2-212ENST00000542001 UBE2DNLQ8IWF7 75 aa11.54□□□□□ -0.56
VARS2-212ENST00000542001 CELSR2Q9HCU4 2923 aa11.54□□□□□ -0.56
VARS2-212ENST00000542001 SMIM1B2RUZ4 78 aa11.53□□□□□ -0.56
VARS2-212ENST00000542001 TRBV30A0A0K0K1B3 111 aa11.53□□□□□ -0.56
VARS2-212ENST00000542001 H7C423 109 aa11.53□□□□□ -0.56
VARS2-212ENST00000542001 OXLD1Q5BKU9 147 aa11.53□□□□□ -0.56
VARS2-212ENST00000542001 NKAPP1Q8N9T2 125 aa11.53□□□□□ -0.56
VARS2-212ENST00000542001 FAM19A4Q96LR4 140 aa11.53□□□□□ -0.56
VARS2-212ENST00000542001 C1orf43Q9BWL3 253 aa11.53□□□□□ -0.56
VARS2-212ENST00000542001 IGHV4-28A0A0C4DH34 117 aa11.52□□□□□ -0.56
VARS2-212ENST00000542001 UBL5Q9BZL1 73 aa11.52□□□□□ -0.57
VARS2-212ENST00000542001 CUBNO60494 3623 aa11.52□□□□□ -0.57
VARS2-212ENST00000542001 STAB1Q9NY15 2570 aa11.52□□□□□ -0.57
VARS2-212ENST00000542001 TRBV6-4A0A1B0GX49 114 aa11.51□□□□□ -0.57
VARS2-212ENST00000542001 SDIM1Q6ZPB5 146 aa11.51□□□□□ -0.57
VARS2-212ENST00000542001 HRNRQ86YZ3 2850 aaPredicted RBP11.51□□□□□ -0.57
VARS2-212ENST00000542001 AMELXQ99217 191 aa11.5□□□□□ -0.57
VARS2-212ENST00000542001 SMCPP49901 116 aaPredicted RBP11.5□□□□□ -0.57
VARS2-212ENST00000542001 ZNF575Q86XF7 245 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms