RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 IGHV3-16A0A0C4DH30 117 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 SPTY2D1-AS1A0A0U1RR47 76 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 LRCOL1A6NCL2 159 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 PRAC2D3DTV9 90 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 K7EQD1 137 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 Q6ZTI0 123 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 ZFAND2AQ8N6M9 145 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 PRSS33Q8NF86 280 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 PATE1Q8WXA2 126 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 PRUNE2Q8WUY3 3088 aa3.57□□□□□ -1.84
SNHG1-218ENST00000541615 IGHV3-20A0A0C4DH32 117 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 SMIM1B2RUZ4 78 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 SLPIP03973 132 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 IGKV4-1P06312 121 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 COX7BP24311 80 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 BSPH1Q075Z2 132 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 KLK9Q2XQG4 91 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 RNASE13Q5GAN3 156 aaKnown RBP3.56□□□□□ -1.84
SNHG1-218ENST00000541615 C11orf71Q6IPW1 123 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 WFDC10AQ9H1F0 79 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 ARFGEF3Q5TH69 2177 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 PCNX2A6NKB5 2137 aa3.56□□□□□ -1.84
SNHG1-218ENST00000541615 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-218ENST00000541615 NDUFA4O00483 81 aa3.55□□□□□ -1.84
SNHG1-218ENST00000541615 CCL3P10147 92 aa3.55□□□□□ -1.84
SNHG1-218ENST00000541615 LINC00158P58513 81 aa3.55□□□□□ -1.84
SNHG1-218ENST00000541615 NANOS2P60321 138 aaKnown RBP3.55□□□□□ -1.84
SNHG1-218ENST00000541615 CNBPP62633 177 aaKnown RBP3.55□□□□□ -1.84
SNHG1-218ENST00000541615 ATP1A1-AS1Q5TC04 95 aa3.55□□□□□ -1.84
SNHG1-218ENST00000541615 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.55□□□□□ -1.84
SNHG1-218ENST00000541615 LINC00575Q6W349 94 aa3.55□□□□□ -1.84
SNHG1-218ENST00000541615 COX7B2Q8TF08 81 aa3.55□□□□□ -1.84
SNHG1-218ENST00000541615 GAFA1Q96PS6 74 aa3.55□□□□□ -1.84
SNHG1-218ENST00000541615 IGHV3-72A0A0B4J1Y9 119 aa3.54□□□□□ -1.84
SNHG1-218ENST00000541615 IGKV3-15P01624 115 aa3.54□□□□□ -1.84
SNHG1-218ENST00000541615 CCL18P55774 89 aa3.54□□□□□ -1.84
SNHG1-218ENST00000541615 CCL14Q16627 93 aa3.54□□□□□ -1.84
SNHG1-218ENST00000541615 HIGD2BQ4VC39 106 aa3.54□□□□□ -1.84
SNHG1-218ENST00000541615 FDCSPQ8NFU4 85 aa3.54□□□□□ -1.84
SNHG1-218ENST00000541615 NPBQ8NG41 125 aa3.54□□□□□ -1.84
SNHG1-218ENST00000541615 S4R3C0 116 aa3.54□□□□□ -1.84
SNHG1-218ENST00000541615 BDP1A6H8Y1 2624 aa3.54□□□□□ -1.84
SNHG1-218ENST00000541615 ZGRF1Q86YA3 2104 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 COX17Q14061 63 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 FAM104AQ969W3 186 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 KCNQ1DNQ9H478 68 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 ZNF702PQ9H963 129 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 MAP6D1Q9H9H5 199 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 RTTNQ86VV8 2226 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 TTC28Q96AY4 2481 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 LAMA3Q16787 3333 aa3.53□□□□□ -1.84
SNHG1-218ENST00000541615 VCANP13611 3396 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.52□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV7-81A0A0B4J1V7 117 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV3-53P01767 116 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 LMO4P61968 165 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 SPAG11BQ08648 103 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 ZNF843Q8N446 348 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 CHCHD7Q9BUK0 85 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 PLAC8Q9NZF1 115 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 PIEZO1Q92508 2521 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 MED13Q9UHV7 2174 aa3.52□□□□□ -1.85
SNHG1-218ENST00000541615 TNCP24821 2201 aa3.51□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV4-30-2A0A087WSY4 118 aa3.51□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV3-64DA0A0J9YX35 117 aa3.51□□□□□ -1.85
SNHG1-218ENST00000541615 CLPSL1A2RUU4 121 aa3.51□□□□□ -1.85
SNHG1-218ENST00000541615 PRB4P10163 310 aaPredicted RBP3.51□□□□□ -1.85
SNHG1-218ENST00000541615 KRTAP10-2P60368 255 aa3.51□□□□□ -1.85
SNHG1-218ENST00000541615 LINC00476Q8WZB0 136 aa3.51□□□□□ -1.85
SNHG1-218ENST00000541615 EYSQ5T1H1 3165 aa3.51□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV3OR16-13A0A075B7E8 117 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 A8MU10 97 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 FSHBP01225 129 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 IGLV1-44P01699 117 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 IGLV1-51P01701 117 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 TFF1P04155 84 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV1-8P0DP01 117 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 MRPS21P82921 87 aaKnown RBP3.5□□□□□ -1.85
SNHG1-218ENST00000541615 PRR9Q5T870 116 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 CHCHD10Q8WYQ3 142 aaPredicted RBP3.5□□□□□ -1.85
SNHG1-218ENST00000541615 KAAG1Q9UBP8 84 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 ARHGAP32A7KAX9 2087 aa3.5□□□□□ -1.85
SNHG1-218ENST00000541615 MUC6Q6W4X9 2439 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 SPTBN5Q9NRC6 3674 aaKnown RBP3.49□□□□□ -1.85
SNHG1-218ENST00000541615 IGLV4-60A0A075B6I1 120 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV3OR16-12A0A075B7B8 117 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV3-35A0A0C4DH35 117 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 H0Y9P7 68 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 RTL8CO15255 209 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV1-46P01743 117 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV4-59P01825 116 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 SPAG11AQ6PDA7 123 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 PI4KAP42356 2102 aa3.49□□□□□ -1.85
SNHG1-218ENST00000541615 RP1P56715 2156 aa3.48□□□□□ -1.85
SNHG1-218ENST00000541615 MUC3AQ02505 3323 aa3.48□□□□□ -1.85
SNHG1-218ENST00000541615 IGLV7-46A0A075B6I9 117 aa3.48□□□□□ -1.85
SNHG1-218ENST00000541615 IGHV3-66A0A0C4DH42 116 aa3.48□□□□□ -1.85
SNHG1-218ENST00000541615 IGLV1-47P01700 117 aa3.48□□□□□ -1.85
SNHG1-218ENST00000541615 APELAP0DMC3 54 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms