RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 LINC00526Q96FQ7 95 aa11.38□□□□□ -0.59
HMGA2-210ENST00000541363 IGFL2Q6UWQ7 119 aa11.37□□□□□ -0.59
HMGA2-210ENST00000541363 LINC00959A0A1B0GUT2 108 aa11.37□□□□□ -0.59
HMGA2-210ENST00000541363 NTM-AS1Q6ZSK4 140 aa11.37□□□□□ -0.59
HMGA2-210ENST00000541363 SPAG11AQ6PDA7 123 aa11.37□□□□□ -0.59
HMGA2-210ENST00000541363 A8MZ25 164 aa11.36□□□□□ -0.59
HMGA2-210ENST00000541363 CLUHP3Q96NS8 147 aa11.36□□□□□ -0.59
HMGA2-210ENST00000541363 PROK1P58294 105 aa11.36□□□□□ -0.59
HMGA2-210ENST00000541363 Q6ZSR3 168 aa11.35□□□□□ -0.59
HMGA2-210ENST00000541363 LINC00482Q8N8I6 264 aa11.35□□□□□ -0.59
HMGA2-210ENST00000541363 NBASA2RRP1 2371 aa11.35□□□□□ -0.59
HMGA2-210ENST00000541363 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
HMGA2-210ENST00000541363 Q8IZM0 81 aa11.35□□□□□ -0.59
HMGA2-210ENST00000541363 TSHBP01222 138 aa11.34□□□□□ -0.59
HMGA2-210ENST00000541363 IGLV2-8P01709 118 aa11.33□□□□□ -0.6
HMGA2-210ENST00000541363 Q8N814 137 aa11.33□□□□□ -0.6
HMGA2-210ENST00000541363 XGP55808 180 aa11.32□□□□□ -0.6
HMGA2-210ENST00000541363 THSD7BQ9C0I4 1608 aa11.32□□□□□ -0.6
HMGA2-210ENST00000541363 FSHBP01225 129 aa11.32□□□□□ -0.6
HMGA2-210ENST00000541363 IGF2-ASQ6U949 168 aa11.32□□□□□ -0.6
HMGA2-210ENST00000541363 C7orf65Q6ZTY9 151 aa11.32□□□□□ -0.6
HMGA2-210ENST00000541363 MBD6Q96DN6 1003 aa11.31□□□□□ -0.6
HMGA2-210ENST00000541363 PRLHP81277 87 aa11.31□□□□□ -0.6
HMGA2-210ENST00000541363 hDV103S1A0JD37 113 aa11.3□□□□□ -0.6
HMGA2-210ENST00000541363 LIMD2Q9BT23 127 aa11.3□□□□□ -0.6
HMGA2-210ENST00000541363 YPEL4Q96NS1 127 aa11.29□□□□□ -0.6
HMGA2-210ENST00000541363 RAI1Q7Z5J4 1906 aaPredicted RBP11.29□□□□□ -0.6
HMGA2-210ENST00000541363 IGLV5-52A0A0A0MRZ9 124 aa11.29□□□□□ -0.6
HMGA2-210ENST00000541363 INAFM1C9JVW0 142 aa11.29□□□□□ -0.6
HMGA2-210ENST00000541363 A0A1B0GU69 56 aa11.28□□□□□ -0.6
HMGA2-210ENST00000541363 SPINT4Q6UDR6 99 aa11.28□□□□□ -0.6
HMGA2-210ENST00000541363 SBSPONQ8IVN8 264 aa11.28□□□□□ -0.6
HMGA2-210ENST00000541363 PTPRSQ13332 1948 aa11.28□□□□□ -0.6
HMGA2-210ENST00000541363 CYSRT1A8MQ03 144 aa11.28□□□□□ -0.6
HMGA2-210ENST00000541363 Q9BRP9 147 aa11.28□□□□□ -0.6
HMGA2-210ENST00000541363 CSPG4Q6UVK1 2322 aa11.28□□□□□ -0.6
HMGA2-210ENST00000541363 Q8N3U1 123 aa11.26□□□□□ -0.61
HMGA2-210ENST00000541363 TECTAO75443 2155 aa11.26□□□□□ -0.61
HMGA2-210ENST00000541363 CRIP1P50238 77 aa11.26□□□□□ -0.61
HMGA2-210ENST00000541363 LINC00575Q6W349 94 aa11.26□□□□□ -0.61
HMGA2-210ENST00000541363 HCG22E2RYF7 251 aa11.25□□□□□ -0.61
HMGA2-210ENST00000541363 ZNF702PQ9H963 129 aa11.25□□□□□ -0.61
HMGA2-210ENST00000541363 C2orf91Q6ZV80 131 aa11.25□□□□□ -0.61
HMGA2-210ENST00000541363 CXCL6P80162 114 aa11.25□□□□□ -0.61
HMGA2-210ENST00000541363 ADAMTS20P59510 1910 aa11.24□□□□□ -0.61
HMGA2-210ENST00000541363 Q6ZS46 218 aa11.24□□□□□ -0.61
HMGA2-210ENST00000541363 RNASE3P12724 160 aaKnown RBP11.24□□□□□ -0.61
HMGA2-210ENST00000541363 LINC01556Q5JQF7 62 aa11.24□□□□□ -0.61
HMGA2-210ENST00000541363 EGFEM1PQ0D2K5 195 aa11.22□□□□□ -0.61
HMGA2-210ENST00000541363 FBXL19-AS1Q494R0 122 aa11.22□□□□□ -0.61
HMGA2-210ENST00000541363 C11orf1Q9H5F2 150 aa11.22□□□□□ -0.61
HMGA2-210ENST00000541363 RIF1Q5UIP0 2472 aaKnown RBP11.22□□□□□ -0.61
HMGA2-210ENST00000541363 TRBV10-3A0A0K0K1G6 114 aa11.22□□□□□ -0.61
HMGA2-210ENST00000541363 MRGPRG-AS1Q2M3A8 158 aa11.22□□□□□ -0.61
HMGA2-210ENST00000541363 CDC42SE2Q9NRR3 84 aa11.22□□□□□ -0.61
HMGA2-210ENST00000541363 LINC00337Q8N6G1 96 aa11.22□□□□□ -0.61
HMGA2-210ENST00000541363 MSMPQ1L6U9 139 aa11.21□□□□□ -0.62
HMGA2-210ENST00000541363 C6orf223Q8N319 242 aa11.21□□□□□ -0.62
HMGA2-210ENST00000541363 IGKV2D-30A0A075B6S6 120 aa11.2□□□□□ -0.62
HMGA2-210ENST00000541363 IGKV2-30P06310 120 aa11.2□□□□□ -0.62
HMGA2-210ENST00000541363 A0A087WYN8 130 aa11.2□□□□□ -0.62
HMGA2-210ENST00000541363 ACYP2P14621 99 aa11.2□□□□□ -0.62
HMGA2-210ENST00000541363 LMO4P61968 165 aa11.2□□□□□ -0.62
HMGA2-210ENST00000541363 C1orf64Q8NEQ6 169 aa11.2□□□□□ -0.62
HMGA2-210ENST00000541363 A0A087WVE0 104 aa11.2□□□□□ -0.62
HMGA2-210ENST00000541363 C2orf48Q96LS8 159 aa11.19□□□□□ -0.62
HMGA2-210ENST00000541363 P0C879 139 aa11.19□□□□□ -0.62
HMGA2-210ENST00000541363 Q6ZSV7 163 aa11.19□□□□□ -0.62
HMGA2-210ENST00000541363 LINC00574Q9H8X3 128 aa11.18□□□□□ -0.62
HMGA2-210ENST00000541363 TMEM254Q8TBM7 123 aa11.18□□□□□ -0.62
HMGA2-210ENST00000541363 CPAMD8Q8IZJ3 1885 aa11.18□□□□□ -0.62
HMGA2-210ENST00000541363 DEFB116Q30KQ4 102 aa11.18□□□□□ -0.62
HMGA2-210ENST00000541363 NAV3Q8IVL0 2385 aa11.18□□□□□ -0.62
HMGA2-210ENST00000541363 PTPRQQ9UMZ3 2332 aa11.18□□□□□ -0.62
HMGA2-210ENST00000541363 F8WDY8 70 aa11.17□□□□□ -0.62
HMGA2-210ENST00000541363 CRIP2P52943 208 aaPredicted RBP11.17□□□□□ -0.62
HMGA2-210ENST00000541363 UNQ6190/PRO20217Q6UXQ8 127 aa11.17□□□□□ -0.62
HMGA2-210ENST00000541363 OTOGLQ3ZCN5 2332 aa11.17□□□□□ -0.62
HMGA2-210ENST00000541363 A0A087WSZ3 146 aa11.17□□□□□ -0.62
HMGA2-210ENST00000541363 LRP4O75096 1905 aa11.17□□□□□ -0.62
HMGA2-210ENST00000541363 PSMG3-AS1Q96PY0 264 aa11.16□□□□□ -0.62
HMGA2-210ENST00000541363 Q8N6K4 173 aa11.16□□□□□ -0.62
HMGA2-210ENST00000541363 HIVEP2P31629 2446 aa11.16□□□□□ -0.62
HMGA2-210ENST00000541363 PRO0628Q9UI54 55 aa11.16□□□□□ -0.62
HMGA2-210ENST00000541363 C9orf116Q5BN46 136 aaPredicted RBP11.15□□□□□ -0.62
HMGA2-210ENST00000541363 Q6ZTC4 211 aa11.15□□□□□ -0.62
HMGA2-210ENST00000541363 C8orf87E5RJ46 101 aa11.15□□□□□ -0.62
HMGA2-210ENST00000541363 EIF4EBP1Q13541 118 aaPredicted RBP11.15□□□□□ -0.63
HMGA2-210ENST00000541363 COL5A1P20908 1838 aaPredicted RBP11.14□□□□□ -0.63
HMGA2-210ENST00000541363 IGLV2-11P01706 119 aa11.14□□□□□ -0.63
HMGA2-210ENST00000541363 SPG11Q96JI7 2443 aa11.14□□□□□ -0.63
HMGA2-210ENST00000541363 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
HMGA2-210ENST00000541363 KLLNB2CW77 178 aa11.13□□□□□ -0.63
HMGA2-210ENST00000541363 CHCHD7Q9BUK0 85 aa11.13□□□□□ -0.63
HMGA2-210ENST00000541363 LY6G6DO95868 133 aa11.12□□□□□ -0.63
HMGA2-210ENST00000541363 PRR3P79522 188 aaKnown RBP11.12□□□□□ -0.63
HMGA2-210ENST00000541363 TP53AIP1Q9HCN2 124 aa11.11□□□□□ -0.63
HMGA2-210ENST00000541363 Q9UF83 564 aa11.11□□□□□ -0.63
HMGA2-210ENST00000541363 FSTL3O95633 263 aa11.1□□□□□ -0.63
HMGA2-210ENST00000541363 PRORYQ9H606 182 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms