RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 F8WEM9 126 aa2.54□□□□□ -2
YBX3-210ENST00000540975 COX6B1P14854 86 aa2.54□□□□□ -2
YBX3-210ENST00000540975 ZNF22P17026 224 aaPredicted RBP2.54□□□□□ -2
YBX3-210ENST00000540975 IFI27P40305 119 aaPredicted RBP2.54□□□□□ -2
YBX3-210ENST00000540975 PLGLAQ15195 96 aa2.54□□□□□ -2
YBX3-210ENST00000540975 ATXN8Q156A1 80 aa2.54□□□□□ -2
YBX3-210ENST00000540975 DEFB110Q30KQ9 67 aa2.54□□□□□ -2
YBX3-210ENST00000540975 LINC00322Q6ZN03 302 aaPredicted RBP2.54□□□□□ -2
YBX3-210ENST00000540975 Q8IYB0 196 aa2.54□□□□□ -2
YBX3-210ENST00000540975 Q8N6K4 173 aa2.54□□□□□ -2
YBX3-210ENST00000540975 ZFAND2AQ8N6M9 145 aa2.54□□□□□ -2
YBX3-210ENST00000540975 SPTSSBQ8NFR3 76 aa2.54□□□□□ -2
YBX3-210ENST00000540975 SMCR5Q8TEV8 140 aa2.54□□□□□ -2
YBX3-210ENST00000540975 CYP4F30PQ9H0H9 118 aa2.54□□□□□ -2
YBX3-210ENST00000540975 LINC00574Q9H8X3 128 aa2.54□□□□□ -2
YBX3-210ENST00000540975 PRO1854Q9UHT4 67 aa2.54□□□□□ -2
YBX3-210ENST00000540975 PCDH15Q96QU1 1955 aa2.54□□□□□ -2
YBX3-210ENST00000540975 TET1Q8NFU7 2136 aa2.53□□□□□ -2
YBX3-210ENST00000540975 IGHV3-43A0A0B4J1X8 118 aa2.53□□□□□ -2
YBX3-210ENST00000540975 TRBV6-1A0A0K0K1D8 114 aa2.53□□□□□ -2
YBX3-210ENST00000540975 HCG22E2RYF7 251 aa2.53□□□□□ -2
YBX3-210ENST00000540975 IGHV3-11P01762 117 aa2.53□□□□□ -2
YBX3-210ENST00000540975 MIFP14174 115 aa2.53□□□□□ -2
YBX3-210ENST00000540975 ZNF137PP52743 207 aa2.53□□□□□ -2
YBX3-210ENST00000540975 FXYD7P58549 80 aa2.53□□□□□ -2
YBX3-210ENST00000540975 SFTA2Q6UW10 78 aa2.53□□□□□ -2
YBX3-210ENST00000540975 ADM2Q7Z4H4 148 aa2.53□□□□□ -2
YBX3-210ENST00000540975 Q8N814 137 aa2.53□□□□□ -2
YBX3-210ENST00000540975 PATE1Q8WXA2 126 aa2.53□□□□□ -2
YBX3-210ENST00000540975 DOCK11Q5JSL3 2073 aa2.53□□□□□ -2.01
YBX3-210ENST00000540975 DSCAML1Q8TD84 2053 aa2.53□□□□□ -2.01
YBX3-210ENST00000540975 DSCAMO60469 2012 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 TRAV22A0A0B4J277 110 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 TRBV10-3A0A0K0K1G6 114 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 A0A1B0GUT8 65 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 hDV103S1A0JD37 113 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 IGHV3-33P01772 117 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 FREM3P0C091 2139 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 ARMS2P0C7Q2 107 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 IGHV3-30-3P0DP02 117 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 PRB4P10163 310 aaPredicted RBP2.52□□□□□ -2.01
YBX3-210ENST00000540975 FCER1GP30273 86 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 C9orf116Q5BN46 136 aaPredicted RBP2.52□□□□□ -2.01
YBX3-210ENST00000540975 C2orf82Q6UX34 121 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 CNEP1R1Q8N9A8 125 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 CDC42SE1Q9NRR8 79 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 UBE2D4Q9Y2X8 147 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 CEP192Q8TEP8 1941 aa2.52□□□□□ -2.01
YBX3-210ENST00000540975 MPDZO75970 2070 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 TRAV12-1A0A0B4J245 112 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 D6R8Y8 96 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 IGHV1-69P01742 117 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 IGHV3-30P01768 117 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 IGHV3-30-5P0DP03 117 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 PLNP26678 52 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 ATP5EP2Q5VTU8 51 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 Q5VV11 94 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 ZNF826PQ6ZT77 177 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 Q86TA4 180 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 TMEM263Q8WUH6 116 aaKnown RBP2.51□□□□□ -2.01
YBX3-210ENST00000540975 ZNF407Q9C0G0 2248 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 SPTBP11277 2137 aa2.51□□□□□ -2.01
YBX3-210ENST00000540975 A0A0J9YY99 117 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 SDHAF1A6NFY7 115 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 C17orf98A8MV24 154 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 SH2D1AO60880 128 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 LHBP01229 141 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 MIAQ16674 131 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 DEFB133Q30KQ1 61 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 C1orf134Q5TEV5 83 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 DYNAPQ8N1N2 210 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 AMELXQ99217 191 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 LINC00467Q9BRT7 94 aa2.5□□□□□ -2.01
YBX3-210ENST00000540975 TIMM8BQ9Y5J9 83 aaPredicted RBP2.5□□□□□ -2.01
YBX3-210ENST00000540975 IGKV1OR2-108A0A075B7D4 117 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 IGHV3-49A0A0A0MS15 119 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 IGHV3-21A0A0B4J1V1 117 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 IGHV1-3A0A0C4DH29 117 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 TRBV30A0A0K0K1B3 111 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 ZNF815PA8K554 130 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 A8MWP4 228 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 F8VRH5 84 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 K7ERS5 55 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 MRPL33O75394 65 aaKnown RBP2.49□□□□□ -2.01
YBX3-210ENST00000540975 ERC2-IT1O76042 136 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 ROMO1P60602 79 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 SPINK9Q5DT21 86 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 Q8NDZ9 215 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 CNFNQ9BYD5 112 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 MYOFQ9NZM1 2061 aa2.49□□□□□ -2.01
YBX3-210ENST00000540975 GOLGB1Q14789 3259 aaKnown RBP2.48□□□□□ -2.01
YBX3-210ENST00000540975 A6NED7 52 aa2.48□□□□□ -2.01
YBX3-210ENST00000540975 CHKB-CPT1BH3BT56 60 aa2.48□□□□□ -2.01
YBX3-210ENST00000540975 LECT2O14960 151 aa2.48□□□□□ -2.01
YBX3-210ENST00000540975 LY6HO94772 140 aa2.48□□□□□ -2.01
YBX3-210ENST00000540975 CRPP02741 224 aa2.48□□□□□ -2.01
YBX3-210ENST00000540975 COX6CP09669 75 aa2.48□□□□□ -2.01
YBX3-210ENST00000540975 RPL28P46779 137 aaKnown RBP2.48□□□□□ -2.01
YBX3-210ENST00000540975 CASC2Q6XLA1 102 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms